Gene
| Gene Model ID | habu1_s7284_g17894 |
|---|---|
| Locus | habu1_scaffold7284 : 388154 ... 405787 : + |
| To GenomeBrowser | habu1_scaffold7284:388154..405787 |
| Genes list of scaffold | habu1_scaffold7284 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tryptophan 5-hydroxylase-like isoform x1 | EC:1.14.16.4 GO:0004510 GO:0005506 GO:0006568 GO:0016597 GO:0042427 GO:0045600 GO:0046849 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7284_g17894.t1 | 1 | 1 | ACT | 65 | 121 | 1.7e-06 | 27.3 | 5.0e-10 | 3.7e-06 | 26.2 |
| habu1_s7284_g17894.t1 | 1 | 1 | Biopterin_H | 149 | 480 | 0.0 | 618.9 | 0.0 | 0.0 | 618.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7284_g17894.t1 | gi|602669759|ref|XP_007440414.1| | PREDICTED: tryptophan 5-hydroxylase-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s7284_g17894.t1 | gi|602669761|ref|XP_007440415.1| | PREDICTED: tryptophan 5-hydroxylase-like isoform X2 [Python bivittatus] | 0.0 |
| habu1_s7284_g17894.t1 | gi|637246406|ref|XP_008105748.1| | PREDICTED: tryptophan 5-hydroxylase 1 [Anolis carolinensis] | 0.0 |
| habu1_s7284_g17894.t1 | gi|591364489|ref|XP_007057143.1| | PREDICTED: tryptophan 5-hydroxylase-like [Chelonia mydas] | 0.0 |
| habu1_s7284_g17894.t1 | gi|530644125|ref|XP_005308740.1| | PREDICTED: tryptophan 5-hydroxylase 1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.4 |
| Brain-1 | 0.5 |
| Eye | 0.3 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.4 |
| Spleen | 0.1 |
| Lung | 0.8 |
| Liver | 1.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.6 |
| Large intestine | 0.3 |
| Stomach | 2.0 |
| heart | 0.3 |
| ovary | 0.0 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s7284_g17894.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17894.t1 cggttcctcttaccgtcgagtgaggcttgctctccttcgccatgtactccaacagaatcgagctgccccggagaggtcac tccttcgactccgtcagctccaacttggatgagaatcagctcagcaatcttttatctcccccggttctgaatgggatctt caaaccaaactatattacaaatgaagacaataaagagaacgagaccaattcatctgaacggagtagagctgctattattt tctcattaaagaatgaagttggaggacttgtcaaagctctaaaactctttcaggaaaaacacgtgaatttggtgcacatt gaatctcgaaaatccagaaggcgaaattcagaatttgagatctttattgactgtgatagcaacagggaacagctagatga agtcttccatctcctgaaatcccatgtgaattttgtgacggtgaacccaatcaacaacctacaggaagatgacatggaaa atataccctggttccctaagaagatctcagatttggataaatgtgcaaaccgcgttctgatgtatggatcagatctagat gcggaccatccaggtttcaaagacaatgtttatcgcaagagacggaagtattttgctgacttggctatgaattacaaaca tggtgacccaattcccaaagtcaaattcacagaggaggaaatcaagacttggggtactgtatttcgggaactcaataaac tgtatccaactcacgcgtgcagagagtatctgaaaaatctgcctttgctttcaaaatactgtgggtatcgagaagacaac atacctcagttagaagatgtgtccctttttcttaaagaacgcactggatttacaatccgccctgttgccggatacctgtc gcccagggatttcttggcaggcttagcgttcagagtatttcactgcactcagtatgttcggcacagttcagatcctcttt atacaccagaaccggatacttgtcatgaacttttgggccatgtccctcttctggctgagcccagttttgctcagttctca caggaaattggactggtatcacttggagcctcagatgaagctgttcaaaagctggccacttgctactttttcacagtgga gtttggcttatgcaaacaagaagggcaactgagagtctatggagctggcttgctctcttctattagcgaattgaagcatg cgctctctggaaatgccaaagtcaagccttttgaacctagtgtcacctgcaagcaagaatgcatgattactaccttccag gaagtttactttatttctgaaagctttgaagatgcaaaagaaaagatgagagagtttgcaaagacaatcaaacgcccatt tggagtgaattacaatccatatacccaaagcgttcagatcctgaaagatccaagaagtattgcacatgtggtgaatgagc tacggcatgaactggacattgtcagtgaggccctcagcaagatggacaagtcctttctcaatgatttgaaaagaaagtag aataatttatctagaaaaatttatagactatattatgaaatgctacatttaaaagctaatggtccatatagcccactatt ctgtgcaaccaatgatggctagtattagctgctatggaaggagcaataaaaccttaaaactatctcaagaag |
|
Protein
| Protein ID | habu1_s7284_g17894.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17894.t1 MYSNRIELPRRGHSFDSVSSNLDENQLSNLLSPPVLNGIFKPNYITNEDNKENETNSSERSRAAIIFSLKNEVGGLVKAL KLFQEKHVNLVHIESRKSRRRNSEFEIFIDCDSNREQLDEVFHLLKSHVNFVTVNPINNLQEDDMENIPWFPKKISDLDK CANRVLMYGSDLDADHPGFKDNVYRKRRKYFADLAMNYKHGDPIPKVKFTEEEIKTWGTVFRELNKLYPTHACREYLKNL PLLSKYCGYREDNIPQLEDVSLFLKERTGFTIRPVAGYLSPRDFLAGLAFRVFHCTQYVRHSSDPLYTPEPDTCHELLGH VPLLAEPSFAQFSQEIGLVSLGASDEAVQKLATCYFFTVEFGLCKQEGQLRVYGAGLLSSISELKHALSGNAKVKPFEPS VTCKQECMITTFQEVYFISESFEDAKEKMREFAKTIKRPFGVNYNPYTQSVQILKDPRSIAHVVNELRHELDIVSEALSK MDKSFLNDLKRK |
|