Gene
Gene Model ID | habu1_s7284_g17896 |
---|---|
Locus | habu1_scaffold7284 : 498041 ... 634933 : - |
To GenomeBrowser | habu1_scaffold7284:498041..634933 |
Genes list of scaffold | habu1_scaffold7284 |
Annotation by Blast2GO
Annotation | GO |
---|---|
potassium voltage-gated channel subfamily c member 1 isoform x2 | GO:0005249 GO:0005871 GO:0008076 GO:0019894 GO:0030673 GO:0032590 GO:0032809 GO:0034765 GO:0051260 GO:0071805 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s7284_g17896.t1 | 1 | 1 | BTB_2 | 10 | 104 | 5.0e-28 | 97.1 | 3.9e-31 | 1.2e-27 | 95.9 |
habu1_s7284_g17896.t1 | 1 | 1 | Ion_trans | 248 | 435 | 2.3e-33 | 115.1 | 7.8e-37 | 2.3e-33 | 115.1 |
habu1_s7284_g17896.t1 | 1 | 1 | Ion_trans_2 | 353 | 436 | 1.5e-10 | 40.6 | 5.1e-14 | 1.5e-10 | 40.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
habu1_s7284_g17896.t1 | gi|602648593|ref|XP_007430712.1| | PREDICTED: potassium voltage-gated channel subfamily C member 1-like [Python bivittatus] | 0.0 |
habu1_s7284_g17896.t1 | gi|637246391|ref|XP_008105711.1| | PREDICTED: potassium voltage-gated channel subfamily C member 1 [Anolis carolinensis] | 0.0 |
habu1_s7284_g17896.t1 | gi|558209911|ref|XP_006133489.1| | PREDICTED: potassium voltage-gated channel subfamily C member 1 isoform X1 [Pelodiscus sinensis] | 0.0 |
habu1_s7284_g17896.t1 | gi|699696963|ref|XP_009890315.1| | PREDICTED: potassium voltage-gated channel subfamily C member 1 isoform X2 [Charadrius vociferus] | 0.0 |
habu1_s7284_g17896.t1 | gi|699683758|ref|XP_009903441.1| | PREDICTED: potassium voltage-gated channel subfamily C member 1 isoform X2 [Picoides pubescens] | 0.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 0.0 |
Venom grand-1 | 0.0 |
Pit, infrared sensing | 0.0 |
Nose | 0.0 |
Brain-1 | 1.5 |
Eye | 0.2 |
fetal fibroblast | 0.0 |
venom gland-2 | 0.0 |
Brain-2 | 2.7 |
Spleen | 0.0 |
Lung | 0.0 |
Liver | 0.0 |
Kidney | 0.0 |
Pancreas | 0.0 |
Small intestine | 0.0 |
Large intestine | 0.0 |
Stomach | 0.0 |
heart | 0.0 |
ovary | 0.0 |
cheek muscle | 0.0 |
Transcript
Transcript ID | habu1_s7284_g17896.t1 |
---|---|
Definition | - |
>habu1_s7284_g17896.t1 gattgcagatgagcagccaccccttatgagcttgctgtgtgttgtgcttgcttggatgattccacgacatgcctaataag agacgagatgggccagggcgatgaaagtgatcgtattgtgatcaatgtgggagggactaggcaccagacttaccgcagca ccttacgcaccttgcctggcacccggctggcctggatcgctgagccagatgcccacagtcactttgactatgacccccgt gcagatgaattcttcttcgatcggcacccaggtgtctttgcccacatcctgaactattaccgaacaggtaagctgcattg cccagcagatgtgtgtggacctctgtatgaggaggagctagccttctggggcattgatgaaacagatgtggagccttgtt gctggatgacctataggcagcatcgtgatgctgaagaggccctggacagttttggtggagcacccctggataacagtgct gatgatggagatgcagatggcacaggagactcaggtgatggtgaagaggagctggagatgaccaaacgcctggccctgag tgattccccagatggaaggcctgggggcttttggaagaggtggcagcctcggatttgggcactctttgaggacccctatt cctccagatatgcaaggtacatcgcatttgcctccctcttcttcattctggtttccatcaccaccttttgcctcgagacc catgagagatttaatcctatcgttaacaagacagagaaggaaattgttggcaatgacacccaggtgcgggtctatcagga gactgagacggaggctttcctgacctacattgaaggggtctgcgtgatttggtttacttttgagtttctgatgaggatca ttttctgccccaacaagatggaatttatcaaaaataccttgaatatcattgactttgtggccattctccctttttacctg gaggttggactcagtggcctgtcttccaaagccgctaaggacgtcttgggcttcttgcgggtggtccggtttgtgcgaat tctgcgaattttcaagctgacccgccatttcgtaggactgcgggttttgggtcatactctccgtgccagcacaaatgaat tcttgctgctcatcatcttcttggcactgggcgtcttaatctttgccacgatgatctactacgctgagagaataggtgct aaacccaatgaccctagtgccagtaaacacacacattttaaaaatattcccattggcttctggtgggctgttgtcaccat gactaccctgggctacggagacatgtatcctcagacttggtcaggcatgctggtgggggccctctgtgctctcgcaggcg tgctgaccattgccatgcctgtacccgtcattgtgaacaattttggaatgtattactccttagctatggctaagcagaag ctaccaaagaaaaaaaagaagcatatcccgcggccgccccagctgggatcccccaattattgtaaatctgtcataaactc tccacaccacagtactcagagcgacacatgcccactcgcccaagaagaaatgttagaaattaacagagcagattcgaaac tgaatggggaggtggccaaggcagcgctggcaaatgaagactgtccccacatagaccaggctatgtcgcctgaggaagct ctgccatttacccgttctggcactcgggagagatatggaccttgcttcctcttatcaaccggggaatatccctgcccgcc tgatggaggaataagaaaggatctttgcaaagaaagtcctgtcattgctaaatatatgccaacagaggcagtcaaagaag aagctaaggctattgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgat ggtgatgatgatggtggtgatgacgatggtgatgagaaagcttaggagtgaagtatttcatagaataaacataagaagaa aaacacaagac |
Protein
Protein ID | habu1_s7284_g17896.t1 |
---|---|
Definition | - |
>habu1_s7284_g17896.t1 MGQGDESDRIVINVGGTRHQTYRSTLRTLPGTRLAWIAEPDAHSHFDYDPRADEFFFDRHPGVFAHILNYYRTGKLHCPA DVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADDGDADGTGDSGDGEEELEMTKRLALSDS PDGRPGGFWKRWQPRIWALFEDPYSSRYARYIAFASLFFILVSITTFCLETHERFNPIVNKTEKEIVGNDTQVRVYQETE TEAFLTYIEGVCVIWFTFEFLMRIIFCPNKMEFIKNTLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILR IFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAKPNDPSASKHTHFKNIPIGFWWAVVTMTT LGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVINSPH HSTQSDTCPLAQEEMLEINRADSKLNGEVAKAALANEDCPHIDQAMSPEEALPFTRSGTRERYGPCFLLSTGEYPCPPDG GIRKDLCKESPVIAKYMPTEAVKEEAKAIDDDDDDDDDDDDDDDDDDDDDDGDDDGGDDDGDEKA |