Gene
| Gene Model ID | habu1_s7284_g17896 |
|---|---|
| Locus | habu1_scaffold7284 : 498041 ... 634933 : - |
| To GenomeBrowser | habu1_scaffold7284:498041..634933 |
| Genes list of scaffold | habu1_scaffold7284 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| potassium voltage-gated channel subfamily c member 1 isoform x2 | GO:0005249 GO:0005871 GO:0008076 GO:0019894 GO:0030673 GO:0032590 GO:0032809 GO:0034765 GO:0051260 GO:0071805 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7284_g17896.t1 | 1 | 1 | BTB_2 | 10 | 104 | 5.0e-28 | 97.1 | 3.9e-31 | 1.2e-27 | 95.9 |
| habu1_s7284_g17896.t1 | 1 | 1 | Ion_trans | 248 | 435 | 2.3e-33 | 115.1 | 7.8e-37 | 2.3e-33 | 115.1 |
| habu1_s7284_g17896.t1 | 1 | 1 | Ion_trans_2 | 353 | 436 | 1.5e-10 | 40.6 | 5.1e-14 | 1.5e-10 | 40.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7284_g17896.t1 | gi|602648593|ref|XP_007430712.1| | PREDICTED: potassium voltage-gated channel subfamily C member 1-like [Python bivittatus] | 0.0 |
| habu1_s7284_g17896.t1 | gi|637246391|ref|XP_008105711.1| | PREDICTED: potassium voltage-gated channel subfamily C member 1 [Anolis carolinensis] | 0.0 |
| habu1_s7284_g17896.t1 | gi|558209911|ref|XP_006133489.1| | PREDICTED: potassium voltage-gated channel subfamily C member 1 isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s7284_g17896.t1 | gi|699696963|ref|XP_009890315.1| | PREDICTED: potassium voltage-gated channel subfamily C member 1 isoform X2 [Charadrius vociferus] | 0.0 |
| habu1_s7284_g17896.t1 | gi|699683758|ref|XP_009903441.1| | PREDICTED: potassium voltage-gated channel subfamily C member 1 isoform X2 [Picoides pubescens] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 1.5 |
| Eye | 0.2 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 2.7 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s7284_g17896.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17896.t1 gattgcagatgagcagccaccccttatgagcttgctgtgtgttgtgcttgcttggatgattccacgacatgcctaataag agacgagatgggccagggcgatgaaagtgatcgtattgtgatcaatgtgggagggactaggcaccagacttaccgcagca ccttacgcaccttgcctggcacccggctggcctggatcgctgagccagatgcccacagtcactttgactatgacccccgt gcagatgaattcttcttcgatcggcacccaggtgtctttgcccacatcctgaactattaccgaacaggtaagctgcattg cccagcagatgtgtgtggacctctgtatgaggaggagctagccttctggggcattgatgaaacagatgtggagccttgtt gctggatgacctataggcagcatcgtgatgctgaagaggccctggacagttttggtggagcacccctggataacagtgct gatgatggagatgcagatggcacaggagactcaggtgatggtgaagaggagctggagatgaccaaacgcctggccctgag tgattccccagatggaaggcctgggggcttttggaagaggtggcagcctcggatttgggcactctttgaggacccctatt cctccagatatgcaaggtacatcgcatttgcctccctcttcttcattctggtttccatcaccaccttttgcctcgagacc catgagagatttaatcctatcgttaacaagacagagaaggaaattgttggcaatgacacccaggtgcgggtctatcagga gactgagacggaggctttcctgacctacattgaaggggtctgcgtgatttggtttacttttgagtttctgatgaggatca ttttctgccccaacaagatggaatttatcaaaaataccttgaatatcattgactttgtggccattctccctttttacctg gaggttggactcagtggcctgtcttccaaagccgctaaggacgtcttgggcttcttgcgggtggtccggtttgtgcgaat tctgcgaattttcaagctgacccgccatttcgtaggactgcgggttttgggtcatactctccgtgccagcacaaatgaat tcttgctgctcatcatcttcttggcactgggcgtcttaatctttgccacgatgatctactacgctgagagaataggtgct aaacccaatgaccctagtgccagtaaacacacacattttaaaaatattcccattggcttctggtgggctgttgtcaccat gactaccctgggctacggagacatgtatcctcagacttggtcaggcatgctggtgggggccctctgtgctctcgcaggcg tgctgaccattgccatgcctgtacccgtcattgtgaacaattttggaatgtattactccttagctatggctaagcagaag ctaccaaagaaaaaaaagaagcatatcccgcggccgccccagctgggatcccccaattattgtaaatctgtcataaactc tccacaccacagtactcagagcgacacatgcccactcgcccaagaagaaatgttagaaattaacagagcagattcgaaac tgaatggggaggtggccaaggcagcgctggcaaatgaagactgtccccacatagaccaggctatgtcgcctgaggaagct ctgccatttacccgttctggcactcgggagagatatggaccttgcttcctcttatcaaccggggaatatccctgcccgcc tgatggaggaataagaaaggatctttgcaaagaaagtcctgtcattgctaaatatatgccaacagaggcagtcaaagaag aagctaaggctattgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgat ggtgatgatgatggtggtgatgacgatggtgatgagaaagcttaggagtgaagtatttcatagaataaacataagaagaa aaacacaagac |
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Protein
| Protein ID | habu1_s7284_g17896.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17896.t1 MGQGDESDRIVINVGGTRHQTYRSTLRTLPGTRLAWIAEPDAHSHFDYDPRADEFFFDRHPGVFAHILNYYRTGKLHCPA DVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADDGDADGTGDSGDGEEELEMTKRLALSDS PDGRPGGFWKRWQPRIWALFEDPYSSRYARYIAFASLFFILVSITTFCLETHERFNPIVNKTEKEIVGNDTQVRVYQETE TEAFLTYIEGVCVIWFTFEFLMRIIFCPNKMEFIKNTLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILR IFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAKPNDPSASKHTHFKNIPIGFWWAVVTMTT LGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVINSPH HSTQSDTCPLAQEEMLEINRADSKLNGEVAKAALANEDCPHIDQAMSPEEALPFTRSGTRERYGPCFLLSTGEYPCPPDG GIRKDLCKESPVIAKYMPTEAVKEEAKAIDDDDDDDDDDDDDDDDDDDDDDGDDDGGDDDGDEKA |
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