Gene
| Gene Model ID | habu1_s7284_g17900 |
|---|---|
| Locus | habu1_scaffold7284 : 957584 ... 1009984 : + |
| To GenomeBrowser | habu1_scaffold7284:957584..1009984 |
| Genes list of scaffold | habu1_scaffold7284 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| atp-binding cassette sub-family c member 8 isoform x2 | GO:0005524 GO:0006813 GO:0007165 GO:0008076 GO:0008152 GO:0008281 GO:0042626 GO:0044325 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7284_g17900.t2 | 1 | 1 | ABC_tran | 211 | 371 | 5.9e-22 | 78.4 | 2.0e-24 | 2.2e-21 | 76.6 |
| habu1_s7284_g17900.t2 | 1 | 1 | ABC_membrane | 529 | 649 | 6.7e-14 | 51.9 | 6.4e-17 | 6.7e-14 | 51.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7284_g17900.t2 | gi|530644139|ref|XP_005308747.1| | PREDICTED: ATP-binding cassette sub-family C member 8 isoform X6 [Chrysemys picta bellii] | 0.0 |
| habu1_s7284_g17900.t2 | gi|530644141|ref|XP_005308748.1| | PREDICTED: ATP-binding cassette sub-family C member 8 isoform X7 [Chrysemys picta bellii] | 0.0 |
| habu1_s7284_g17900.t2 | gi|637246364|ref|XP_008105665.1| | PREDICTED: ATP-binding cassette sub-family C member 8 isoform X2 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.8 |
| Venom grand-1 | 0.5 |
| Pit, infrared sensing | 0.6 |
| Nose | 0.1 |
| Brain-1 | 1.6 |
| Eye | 1.3 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 0.2 |
| Brain-2 | 0.9 |
| Spleen | 1.2 |
| Lung | 0.0 |
| Liver | 0.6 |
| Kidney | 0.2 |
| Pancreas | 0.7 |
| Small intestine | 0.2 |
| Large intestine | 0.1 |
| Stomach | 0.2 |
| heart | 29.2 |
| ovary | 0.4 |
| cheek muscle | 1.1 |
Transcript
| Transcript ID | habu1_s7284_g17900.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17900.t1 agtcgaggactaaaccggtcgtaagtcgaggactaaaccggtcctcacctgctggccccccgaaaggcaggtccgcgcgc gtccccgtagcaagttgcccagcgcgcgcgcacacacacacacacacgcgcgctcgctctctctctctcccgaggaagcg catctggccgctttccgatggcttcctccacgcgcgaatgggccgggctggccgccgcgtccctcaagtaaaggcgcgag aagagcgccgccaaggcaggaaagccggagctcttcagccgcgcttcggtgcctgtccggtccggcctcgtcttcatccc gccgccgccgtctcctcctcctcttccaccatgccgttggctttctgtggcagcgggctcaactcgactgcttacgaggt gaccgacggggtgctcaacaacggctgtttcgtggacgccctgaacgtggtcccccatgttttcctgcttttcatcacgt tccccattctcttcataggatggggaagtcaaagttccaaagttcatatccatcatagcacttggcttcattttcctggt cataatttacggtggattttgacttttatccttttgtttgtgctggtctgtgaaatagctgaaggaatcgtgtcagatgg tgtggttagatccactgttaaagctcttgtaagtgtccaaaagttaagtgaatttctctcgagtgaagaaattgcagacg agtatgataaatgtcctgagccaagaaacccagacaaccacagcaaatatcaggttcttaccctcaaagttgttaaccgt aagaggcctgccagagaggactggaacaattacagctctcgtataagaagatctgttagcagcacagaagcagatgattt ttgtgtaaaggtcacgaatggatttttcacatggacgccagaaggagttccaactttatccagcattgatattcgaattc ctcaaggtcagttaacaatgattgtgggacaagtaggctgtggtaaatcatctctcttattaggaatacttggagagatg cagaagacatctgggaatgtgatctggaacagcagcattcctgacaatgagacaggggaagatgtcagctccgacatgga aacaatggttgaaatggagcccagaaaaagagggccagtggcatatgcttctcagaagccatggttgttaaatgctacgg tggaagaaaatatcacttttgaaagccccttcaataaacaaaggtataaagcagtaattgatgcttgctgtcttcagcct gatattgacatactacctcatggagaccaaacacagattggagagaggggtattaatttatctggaggtcagcgccaaag aatcagtgtagcaagagctctttaccaacagacaaatgtggtatttctggatgatccattttcagcactagatatccact tgagtgatcatctcatgcaagaaggaattctgaatttgctaagagcagacaagaaaaccattgttttagttacccacaaa ctacagtatctgccccatgctgactggattattgcaatgaaggatggtaccattcagcgagaaggcacactgaaggatat ccagaaatctgaatctgagctctttgaacattggaaaacactaatgaatcgacaggaccaagaactagaaaaggagattg taattgaaagaaaagctgtattggataagaagaatattaaaaagacagtgcattctcaagaaatcctccaagatgaagaa gaggatgatgacgagatgcctgagagtgatgatgatgatgacaacttgtcttctgtccttcatcgaacaacagagatgtc atggcaagcatgtgggaagtatctcagctcagcaggatttctcttcttgcctctgttgatcttttctcaatttctaaaac attcggtcatggtgtccattgactattggctagccttgtggacatctgatgctatttcctctgagatggggaaaaactgc tctttttgtcaggaatccaagtttagccatttttcctattcaaagatattcagcattctctgttgtgttgggattatatt atgccttgtaacatcaatagcagtagaatggactggcttaaaagttgccaaaaaagttcactgcagtcttctgaataaaa ttattctggccccaatgagatttttcgaaaccacacccctgggaagtattttgaacagattttcagcagattgtaacact attgatcagattatcttcttatagccagactcttaggcaaagtatacttattctgcaatagggtcatccccgtttaaaat ttcattcagctatcaggcattacttaggtatagctttaataaataactggtactgagttcaagga |
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| Transcript ID | habu1_s7284_g17900.t2 |
| Definition | - |
>habu1_s7284_g17900.t2 agtcgaggactaaaccggtcgtaagtcgaggactaaaccggtcctcacctgctggccccccgaaaggcaggtccgcgcgc gtccccgtagcaagttgcccagcgcgcgcgcacacacacacacacacgcgcgctcgctctctctctctcccgaggaagcg catctggccgctttccgatggcttcctccacgcgcgaatgggccgggctggccgccgcgtccctcaagtaaaggcgcgag aagagcgccgccaaggcaggaaagccggagctcttcagccgcgcttcggtgcctgtccggtccggcctcgtcttcatccc gccgccgccgtctcctcctcctcttccaccatgccgttggctttctgtggcagcgggctcaactcgactgcttacgaggt gaccgacggggtgctcaacaacggctgtttcgtggacgccctgaacgtggtcccccatgttttcctgcttttcatcacgt tccccattctcttcataggatggggaagtcaaagttccaaagttcatatccatcatagcacttggcttcattttcctggt cataatttacggtggattttgacttttatccttttgtttgtgctggtctgtgaaatagctgaaggaatcgtgtcagatgg tgtggttagatccactgttaaagctcttgtaagtgtccaaaagttaagtgaatttctctcgagtgaagaaattgcagacg agtatgataaatgtcctgagccaagaaacccagacaaccacagcaaatatcaggttcttgtcacgaatggatttttcaca tggacgccagaaggagttccaactttatccagcattgatattcgaattcctcaaggtcagttaacaatgattgtgggaca agtaggctgtggtaaatcatctctcttattaggaatacttggagagatgcagaagacatctgggaatgtgatctggaaca gcagcattcctgacaatgagacaggggaagatgtcagctccgacatggaaacaatggttgaaatggagcccagaaaaaga gggccagtggcatatgcttctcagaagccatggttgttaaatgctacggtggaagaaaatatcacttttgaaagcccctt caataaacaaaggtataaagcagtaattgatgcttgctgtcttcagcctgatattgacatactacctcatggagaccaaa cacagattggagagaggggtattaatttatctggaggtcagcgccaaagaatcagtgtagcaagagctctttaccaacag acaaatgtggtatttctggatgatccattttcagcactagatatccacttgagtgatcatctcatgcaagaaggaattct gaatttgctaagagcagacaagaaaaccattgttttagttacccacaaactacagtatctgccccatgctgactggatta ttgcaatgaaggatggtaccattcagcgagaaggcacactgaaggatatccagaaatctgaatctgagctctttgaacat tggaaaacactaatgaatcgacaggaccaagaactagaaaaggagattgtaattgaaagaaaagctgtattggataagaa gaatattaaaaagacagtgcattctcaagaaatcctccaagatgaagaagaggatgatgacgagatgcctgagagtgatg atgatgatgacaacttgtcttctgtccttcatcgaacaacagagatgtcatggcaagcatgtgggaagtatctcagctca gcaggatttctcttcttgcctctgttgatcttttctcaatttctaaaacattcggtcatggtgtccattgactattggct agccttgtggacatctgatgctatttcctctgagatggggaaaaactgctctttttgtcaggaatccaagtttagccatt tttcctattcaaagatattcagcattctctgttgtgttgggattatattatgccttgtaacatcaatagcagtagaatgg actggcttaaaagttgccaaaaaagttcactgcagtcttctgaataaaattattctggccccaatgagatttttcgaaac cacacccctgggaagtattttgaacagattttcagcagattgtaacactattgatcagattatcttcttatagccagact cttaggcaaagtatacttattctgcaatagggtcatccccgtttaaaatttcattcagctatcaggcattacttaggtat agctttaataaataactggtactgagttcaagga |
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Protein
| Protein ID | habu1_s7284_g17900.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17900.t1 MGRAGRRVPQVKAREERRQGRKAGALQPRFGACPVRPRLHPAAAVSSSSSTMPLAFCGSGLNSTAYEVTDGVLNNGCFVD ALNVVPHVFLLFITFPILFIGWGSQSSKVHIHHSTWLHFPGHNLRWILTFILLFVLVCEIAEGIVSDGVVRSTVKALVSV QKLSEFLSSEEIADEYDKCPEPRNPDNHSKYQVLTLKVVNRKRPAREDWNNYSSRIRRSVSSTEADDFCVKVTNGFFTWT PEGVPTLSSIDIRIPQGQLTMIVGQVGCGKSSLLLGILGEMQKTSGNVIWNSSIPDNETGEDVSSDMETMVEMEPRKRGP VAYASQKPWLLNATVEENITFESPFNKQRYKAVIDACCLQPDIDILPHGDQTQIGERGINLSGGQRQRISVARALYQQTN VVFLDDPFSALDIHLSDHLMQEGILNLLRADKKTIVLVTHKLQYLPHADWIIAMKDGTIQREGTLKDIQKSESELFEHWK TLMNRQDQELEKEIVIERKAVLDKKNIKKTVHSQEILQDEEEDDDEMPESDDDDDNLSSVLHRTTEMSWQACGKYLSSAG FLFLPLLIFSQFLKHSVMVSIDYWLALWTSDAISSEMGKNCSFCQESKFSHFSYSKIFSILCCVGIILCLVTSIAVEWTG LKVAKKVHCSLLNKIILAPMRFFETTPLGSILNRFSADCNTIDQIIFL |
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| Protein ID | habu1_s7284_g17900.t2 |
| Definition | - |
>habu1_s7284_g17900.t2 MGRAGRRVPQVKAREERRQGRKAGALQPRFGACPVRPRLHPAAAVSSSSSTMPLAFCGSGLNSTAYEVTDGVLNNGCFVD ALNVVPHVFLLFITFPILFIGWGSQSSKVHIHHSTWLHFPGHNLRWILTFILLFVLVCEIAEGIVSDGVVRSTVKALVSV QKLSEFLSSEEIADEYDKCPEPRNPDNHSKYQVLVTNGFFTWTPEGVPTLSSIDIRIPQGQLTMIVGQVGCGKSSLLLGI LGEMQKTSGNVIWNSSIPDNETGEDVSSDMETMVEMEPRKRGPVAYASQKPWLLNATVEENITFESPFNKQRYKAVIDAC CLQPDIDILPHGDQTQIGERGINLSGGQRQRISVARALYQQTNVVFLDDPFSALDIHLSDHLMQEGILNLLRADKKTIVL VTHKLQYLPHADWIIAMKDGTIQREGTLKDIQKSESELFEHWKTLMNRQDQELEKEIVIERKAVLDKKNIKKTVHSQEIL QDEEEDDDEMPESDDDDDNLSSVLHRTTEMSWQACGKYLSSAGFLFLPLLIFSQFLKHSVMVSIDYWLALWTSDAISSEM GKNCSFCQESKFSHFSYSKIFSILCCVGIILCLVTSIAVEWTGLKVAKKVHCSLLNKIILAPMRFFETTPLGSILNRFSA DCNTIDQIIFL |
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