Gene
| Gene Model ID | habu1_s7349_g17979 |
|---|---|
| Locus | habu1_scaffold7349 : 962417 ... 978162 : + |
| To GenomeBrowser | habu1_scaffold7349:962417..978162 |
| Genes list of scaffold | habu1_scaffold7349 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuromedin-u isoform x2 | GO:0005102 GO:0005576 GO:0006940 GO:0007186 GO:0007586 GO:0048518 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7349_g17979.t2 | 1 | 1 | NMU | 113 | 133 | 2.0e-10 | 39.9 | 3.1e-14 | 4.5e-10 | 38.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7349_g17979.t2 | gi|109150247|emb|CAK50583.1| | neuromedin U precursor [Homo sapiens] | 3.0e-22 |
| habu1_s7349_g17979.t2 | gi|297292894|ref|XP_001085777.2| | PREDICTED: neuromedin-U-like [Macaca mulatta] | 5.0e-21 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.2 |
| Brain-1 | 0.9 |
| Eye | 0.1 |
| fetal fibroblast | 10.5 |
| venom gland-2 | 0.0 |
| Brain-2 | 1.9 |
| Spleen | 0.0 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.1 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 4.2 |
| heart | 0.0 |
| ovary | 79.8 |
| cheek muscle | 0.8 |
Transcript
| Transcript ID | habu1_s7349_g17979.t1 |
|---|---|
| Definition | - |
>habu1_s7349_g17979.t1 cggcagggaaaaggccaaggaaacgagcaggagcgccggcggaaagaggcaccatgcgaagagaccgcgcttgcagcccc cggccggagctgcgcccgttgccggcagcagcctttgctcaggacggcagccccggcaaagccggtcgccccaaccgggg gaagcccggtcccggagtaccctggcggttgctgctcgccctgctggcctttggggtgagctcctgcaaaggtgcaccag tgatgtcccatgttctccaaggagaaaaagtgtggaacgagatagaggatatgtgttctgctatcccagctacagatact ctgcctcagccatccaatgcactggaagaattttgctttatggttctggaatttctacagaatgataagctattggtcac acaccctatgctgtcacttgttcctcaacttcatgaccagagacagaagagatacaaagcggacgaagaacttcgaatac ccggaggagttcaaagtagagggtactttatgttccgaccacgtaatggaagaagatcagctactttctattaaaaaggc ttgttcttggatcacttctgcagctgcagaaaaaatggacatcttatgcgctattaaatgtcaaagctttttttaaagat |
|
| Transcript ID | habu1_s7349_g17979.t2 |
| Definition | - |
>habu1_s7349_g17979.t2 cggcagggaaaaggccaaggaaacgagcaggagcgccggcggaaagaggcaccatgcgaagagaccgcgcttgcagcccc cggccggagctgcgcccgttgccggcagcagcctttgctcaggacggcagccccggcaaagccggtcgccccaaccgggg gaagcccggtcccggagtaccctggcggttgctgctcgccctgctggcctttggggtgagctcctgcaaaggtgcaccag tgatgtcccatgttctccaaggagaaaaagtgtggaacgagatagaggatatgtgttctgctatcccagctacagatact ctgcctcagccatccaatgcactggaagaattttgctttatggttctggaatttctacagaatgataaggaagaacttcg aatacccggaggagttcaaagtagagggtactttatgttccgaccacgtaatggaagaagatcagctactttctattaaa aaggcttgttcttggatcacttctgcagctgcagaaaaaatggacatcttatgcgctattaaatgtcaaagcttttttta aagat |
|
Protein
| Protein ID | habu1_s7349_g17979.t1 |
|---|---|
| Definition | - |
>habu1_s7349_g17979.t1 MRRDRACSPRPELRPLPAAAFAQDGSPGKAGRPNRGKPGPGVPWRLLLALLAFGVSSCKGAPVMSHVLQGEKVWNEIEDM CSAIPATDTLPQPSNALEEFCFMVLEFLQNDKLLVTHPMLSLVPQLHDQRQKRYKADEELRIPGGVQSRGYFMFRPRNGR RSATFY |
|
| Protein ID | habu1_s7349_g17979.t2 |
| Definition | - |
>habu1_s7349_g17979.t2 MRRDRACSPRPELRPLPAAAFAQDGSPGKAGRPNRGKPGPGVPWRLLLALLAFGVSSCKGAPVMSHVLQGEKVWNEIEDM CSAIPATDTLPQPSNALEEFCFMVLEFLQNDKEELRIPGGVQSRGYFMFRPRNGRRSATFY |
|