Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s7349_g17980
Locus habu1_scaffold7349 : 985407 ... 992838 : +
To GenomeBrowser habu1_scaffold7349:985407..992838
Genes list of scaffold habu1_scaffold7349

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s7349_g17980.t1 gi|327273682|ref|XP_003221609.1| PREDICTED: phosducin-like protein 2 [Anolis carolinensis] 2.0e-37
habu1_s7349_g17980.t1 gi|697442866|ref|XP_009664489.1| PREDICTED: phosducin-like protein 2 [Struthio camelus australis] 1.0e-35
habu1_s7349_g17980.t1 gi|719743979|ref|XP_010210610.1| PREDICTED: phosducin-like protein 2 [Tinamus guttatus] 1.0e-35
habu1_s7349_g17980.t1 gi|514716736|ref|XP_005012861.1| PREDICTED: phosducin-like protein 2 [Anas platyrhynchos] 4.0e-33
habu1_s7349_g17980.t1 gi|690429373|ref|XP_009333483.1| PREDICTED: LOW QUALITY PROTEIN: phosducin-like protein 2 [Pygoscelis adeliae] 4.0e-33

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.0
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s7349_g17980.t1
Definition-
>habu1_s7349_g17980.t1
gccaccactgtactatatgctgcctaaaggcagagattcattaaagacaaatattgcatgtacacttaatatggttaatt
tatatttgacttatagtgatgcacgaattcagccatggatccaaatgaagatacagaatggaacgacgtcttaagagatt
ttgggattctgcctccaaaagaggaggtgaaggatgaaattgaggaaatggttttacgtttacaaaaggaagcagaagtg
aaaccttatgaaaaaatgaatctgaaacaactaaaagaagctgaagatgattttgatgaggaagagttaaaagctgttga
aatgtacaggatggtcgcgtaccacctgccaggtgccaatgtaccacaggtggtacccgtaccactggttgaaaagccct
gctcttgagtactcttaacctgagtgtatcctctttctatattgcttgcatcacatcttttgagttttccaaacttctac
gatgttactcaggggacgttttatttatccttagtataatccctctaataaaaaaagtcaagtgactcgaaatt

Protein
Protein IDhabu1_s7349_g17980.t1
Definition-
>habu1_s7349_g17980.t1
MDPNEDTEWNDVLRDFGILPPKEEVKDEIEEMVLRLQKEAEVKPYEKMNLKQLKEAEDDFDEEELKAVEMYRMVAYHLPG
ANVPQVVPVPLVEKPCS

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