Gene
| Gene Model ID | habu1_s7349_g17984 |
|---|---|
| Locus | habu1_scaffold7349 : 1101967 ... 1138278 : + |
| To GenomeBrowser | habu1_scaffold7349:1101967..1138278 |
| Genes list of scaffold | habu1_scaffold7349 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nf-x1-type zinc finger protein nfxl1 | GO:0003700 GO:0005634 GO:0005667 GO:0006355 GO:0008270 GO:0016020 GO:0045449 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7349_g17984.t1 | 5 | 1 | zf-NF-X1 | 239 | 257 | 6.1e-07 | 29.2 | 5.1e-09 | 7.6e-05 | 22.5 |
| habu1_s7349_g17984.t1 | 5 | 2 | zf-NF-X1 | 291 | 310 | 6.1e-07 | 29.2 | 2.5e-07 | 0.0037 | 17.1 |
| habu1_s7349_g17984.t1 | 5 | 3 | zf-NF-X1 | 344 | 363 | 6.1e-07 | 29.2 | 2.7e-07 | 0.004 | 17.0 |
| habu1_s7349_g17984.t1 | 5 | 4 | zf-NF-X1 | 396 | 415 | 6.1e-07 | 29.2 | 6.6e-06 | 0.098 | 12.6 |
| habu1_s7349_g17984.t1 | 5 | 5 | zf-NF-X1 | 417 | 442 | 6.1e-07 | 29.2 | 7.8e-07 | 0.012 | 15.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7349_g17984.t1 | gi|29881573|gb|AAH51193.1| | NFXL1 protein [Homo sapiens] | 0.0 |
| habu1_s7349_g17984.t1 | gi|594665415|ref|XP_007180820.1| | PREDICTED: NF-X1-type zinc finger protein NFXL1 isoform X4 [Balaenoptera acutorostrata scammoni] | 0.0 |
| habu1_s7349_g17984.t1 | gi|602731253|ref|XP_007451032.1| | PREDICTED: NF-X1-type zinc finger protein NFXL1 [Lipotes vexillifer] | 0.0 |
| habu1_s7349_g17984.t1 | gi|327281251|ref|XP_003225362.1| | PREDICTED: NF-X1-type zinc finger protein NFXL1 [Anolis carolinensis] | 0.0 |
| habu1_s7349_g17984.t1 | gi|471400204|ref|XP_004382989.1| | PREDICTED: NF-X1-type zinc finger protein NFXL1 [Trichechus manatus latirostris] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.9 |
| Venom grand-1 | 2.9 |
| Pit, infrared sensing | 2.0 |
| Nose | 3.4 |
| Brain-1 | 4.7 |
| Eye | 2.6 |
| fetal fibroblast | 5.5 |
| venom gland-2 | 5.1 |
| Brain-2 | 4.5 |
| Spleen | 1.9 |
| Lung | 2.3 |
| Liver | 2.4 |
| Kidney | 2.3 |
| Pancreas | 1.2 |
| Small intestine | 2.1 |
| Large intestine | 1.5 |
| Stomach | 1.8 |
| heart | 1.5 |
| ovary | 26.9 |
| cheek muscle | 3.8 |
Transcript
| Transcript ID | habu1_s7349_g17984.t1 |
|---|---|
| Definition | - |
>habu1_s7349_g17984.t1 gtcggaggggcagcggccgtcggaggcccgcggcttccactaagtggagggatggaagccgctgcttggcgccagggagg gcgcgggagaggcaggggccgggctgcagccggcggggtctctttgggcaacggacccggcgggcggggaaaggcgagag gagccggagggttgccggccggcgcagggggagcccaggaacttgcatcgcagaagaaatttgatgaaatcaagaaggct aatcaagctgcagttaagaggcttgttgaaaatcaatttaactcctcatctgatgatgatgaagaagaagaagaaattga agggaagcacggacaaatattggccaaaacatttacaaaatatactaatcagactgatggagatgcaagtgagttggagc gcacaaagcaatatatgaacgatgcctttcaatctggggcactgacgtgcctgatttgcattgcttcaattaagagaaat caagcagtctggagttgttctgggtgcttctgcatatttcatatgccgtgcatacaaaagtgggcgaaagatagcctttt tttagtatcttctcctctgactaatgatgattttggaaaaaaggattatccatggccatgtccaaaatgcaggtttgaat acaagcgatctcagattcctactcgatactattgctattgtgggaaggttgaagatccgcctctggatccttggctggtt ccacattcttgtggccaggtctgcgagagagatttcaaacctccttgtggacacaggtgtctattgctctgccatccagg agattgccaaccgtgtccaagagtcagtaaacaaagttgtgtctgtggtaaacaaatagcagaaaggcagtgtgcaagtc ctttctggcaatgtgatgtgatttgtgggcgaaccttgtcttgtggctatcatgtctgtgaacaaatttgtcatggcggc tcctgtggtgaatgtcccagatctgggaaaaggtcttgtccttgtggaaaatcaaaattttctttgccgtgtactgaaga tgtgcctacttgtggagatagttgtgacaaagatcttgaatgtgggattcacagatgttcacaacgctgccatcgaggtg cttgcgaaatttgtagacaggaagttgaaaagcagtgtcgttgtgggaagcatatgaaacagatgccctgccataagcca tacctctgtgacaccaagtgtacaaaaatacgggattgtcaaaaacaccagtgcaaaagaaagtgttgtcctggaaattg tccaccatgtgaccaagtctgtggtcgaatgttaggatgtcgtaaccacaagtgtccttcagtctgccacagaggcagct gctatccatgccctgaaactgtggatgtgaagtgcaattgtggtaaaacggttctcaaagtaccttgtgggagagaacgt accaccaaagctcccagatgcaaagaattctgcaagcagccaccaacttgccatcatccgagtcgagagaaacacagttg ccattttggcccttgccctccttgccaccagacctgcaagaaagttttagaaaaatgcggtcacttatgccctgcttcct gccacgatgaagcccttgtaaagcaaactggcctgctaagctttgttggacttatccgtggatttctttttcttaaagca tcagcctgcaggaccgtgggaaaagtccaccgcacctgcttttattcagacagcattgccttgtcctccatgccacgtcc ctattccaacgcaatgctttggaaaacacgagtgctgccaaaactacagaatactctaaatatttctgacttttaatatt aaaataaaactttaccctgtttaaggcctt |
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Protein
| Protein ID | habu1_s7349_g17984.t1 |
|---|---|
| Definition | - |
>habu1_s7349_g17984.t1 MEAAAWRQGGRGRGRGRAAAGGVSLGNGPGGRGKARGAGGLPAGAGGAQELASQKKFDEIKKANQAAVKRLVENQFNSSS DDDEEEEEIEGKHGQILAKTFTKYTNQTDGDASELERTKQYMNDAFQSGALTCLICIASIKRNQAVWSCSGCFCIFHMPC IQKWAKDSLFLVSSPLTNDDFGKKDYPWPCPKCRFEYKRSQIPTRYYCYCGKVEDPPLDPWLVPHSCGQVCERDFKPPCG HRCLLLCHPGDCQPCPRVSKQSCVCGKQIAERQCASPFWQCDVICGRTLSCGYHVCEQICHGGSCGECPRSGKRSCPCGK SKFSLPCTEDVPTCGDSCDKDLECGIHRCSQRCHRGACEICRQEVEKQCRCGKHMKQMPCHKPYLCDTKCTKIRDCQKHQ CKRKCCPGNCPPCDQVCGRMLGCRNHKCPSVCHRGSCYPCPETVDVKCNCGKTVLKVPCGRERTTKAPRCKEFCKQPPTC HHPSREKHSCHFGPCPPCHQTCKKVLEKCGHLCPASCHDEALVKQTGLLSFVGLIRGFLFLKASACRTVGKVHRTCFYSD SIALSSMPRPYSNAMLWKTRVLPKLQNTLNISDF |
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