Gene
| Gene Model ID | habu1_s7547_g18133 |
|---|---|
| Locus | habu1_scaffold7547 : 102828 ... 137685 : - |
| To GenomeBrowser | habu1_scaffold7547:102828..137685 |
| Genes list of scaffold | habu1_scaffold7547 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| reverse transcriptase family protein | GO:0006259 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7547_g18133.t3 | 1 | 1 | RVT_1 | 158 | 285 | 6.4e-13 | 48.5 | 1.1e-16 | 1.6e-12 | 47.2 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s7547_g18133.t1 |
|---|---|
| Definition | - |
>habu1_s7547_g18133.t1 agtcgagtcgagctggaagtgacattggaggtcttctagtccagccccctgctcagtctcttcttgaacatttccagtga tggagcgtcaacaatttttggggaattccagagtcagcgtgaaggcggaggccatgctcaagatgcagtgtaggagtttt gaagggctgctagatgtggtggtagttgggggtgatcatacgagtcttattggactcgattggttcgaggcccttgggat tcaagtgactggacttcacaatctgcaaacgtcaggccttgcagaagtttgcaaggagtttgctgatgtgttcagttcag agcttggctcgtacaaggggcctcccattgctttatgtttagacccagacatcacacccatcaggatcaagccccgaagg atgccttttgccctaaagaacaaaatagatgcagagctggacaagctgctccagcagggcatcttagaacctgtggactc tagtccatgggaaacccctatagtcacgccactgaaggccaatggagaagtccgaatttgtgcagactataaatgtacac taaataaggcattgcagcagcatgcctacctggtgcctgtggtgagccacattctggcctcactcaagggggggcaaatc ttggcaaagcttgatttggctcaggcctatcaacagctacctgttgatgaggcaacggctgaggcccaaacaattgtgac gcaccagggagactttaaagtaaaaaggctgcagtttggggttaatgtggcccctggaatattccagagtgtgatggagc gaacgctccatggtattcctggggtctatccctactttgatgatgtcctcattgctggggagtcatctgggaacttagct gaaaggctgagggttgtcttgctgcgtttccgccaagcagggctgaagctgaagcaagacaaatgtaagattggagttac ctccactgaatttctggggttccgtattgatgctgaaggcatccatcctgctgaatccaagctcaaagcaattcagcagg ccccaagtcccaagtccaaaagtgaacttcagttttttctgggactgttaaacttttaccatgcatttctacctcacaag gccgcagtggctgagccattacactggctcttggataaacaggctccttggcagtggacacaagtccatgaaaagagctt ttcagaggtcaaggccttgctttcctcaaatgctgtgttagctcatttcaatgagcaattgcctatatgcatagcctgtg atgcatccccttatggggttggggctgtgctgagccacctcaaggctgataggacgcaagtctctgtggcctactactcc agaactctctcatctgcagagcgtaattacgcgcagattgacagagaagccttggcaatagtggctggcataaagaaatt ccatgatttcttatatggctgccatttcacggtctacacagaccataagcctctgctgggtttgttcacaacaaacaaac aaacccctcatataatatcccctagaatgctgagatggtcaattttcctgtcagcatatgactatactctggtccacaaa ccaggcggagcggggcggcttcggtacccgcagagaatgaagaaagggcctggagtgggacgagccatcttgttctgcat tgaaaaaagtgataactccaagccccgaaggaggctgccttggcccttcccagggcttcctgctggaggagaggcaccag gagccagaggtcagtggttgcaggaagtggtgagaacaggaggaaaacagaggagcctcctcattgtgatgctgtccaga tattttgggattacaatgcacatcatttccagaatagggtctccaagccactttcctccaaagagagagtgtggcggaat acttagcgtaaatttgctggtcaaggctcttctctgtccccaaagcttgcttcagaagtggcagcccgcagtgggtgcaa acaatacgctgctctgggcctccccttttccttccaatcagcttaaagcacaaaaaatcttcaaaggaacagaactggga cttcagatcatttctgagatgacttgaagatgggaccaagtgacttgcctcctgagaacaatgcctgttcagtctctgca tggtatcctgagaaggacaaagacttttgcacttcttccaaaatgttcctactggggtgtgagaataaggcaagcatcca gttttcttttctgctttttacaggtgcctgaattgtgattctgaaacttctgtcaagttcctgagggcaataaaaatatt aaaacattctgctatg |
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| Transcript ID | habu1_s7547_g18133.t2 |
| Definition | - |
>habu1_s7547_g18133.t2 agtcgagtcgagctggaagtgacattggaggtcttctagtccagccccctgctcagtctcttcttgaacatttccagtga tggagcgtcaacaatttttggggaattccagagtcagcgtgaaggcggaggccatgctcaagatgcagtgtaggagtttt gaagggctgctagatgtggtggtagttgggggtgatcatacgagtcttattggactcgattggttcgaggcccttgggat tcaagtgactggacttcacaatctgcaaacgtcaggccttgcagaagtttgcaaggagtttgctgatgtgttcagttcag agcttggctcgtacaaggggcctcccattgctttatgtttagacccagacatcacacccatcaggatcaagccccgaagg atgccttttgccctaaagaacaaaatagatgcagagctggacaagctgctccagcagggcatcttagaacctgtggactc tagtccatgggaaacccctatagtcacgccactgaaggccaatggagaagtccgaatttgtgcagactataaatgtacac taaataaggcattgcagcagcatgcctacctggtgcctgtggtgagccacattctggcctcactcaagggggggcaaatc ttggcaaagcttgatttggctcaggcctatcaacagctacctgttgatgaggcaacggctgaggcccaaacaattgtgac gcaccagggagactttaaagtaaaaaggctgcagtttggggttaatgtggcccctggaatattccagagtgtgatggagc gaacgctccatggtattcctggggtctatccctactttgatgatgtcctcattgctggggagtcatctgggaacttagct gaaaggctgagggttgtcttgctgcgtttccgccaagcagggctgaagctgaagcaagacaaatgtaagattggagttac ctccactgaatttctggggttccgtattgatgctgaaggcatccatcctgctgaatccaagctcaaagcaattcagcagg ccccaagtcccaagtccaaaagtgaacttcagttttttctgggactgttaaacttttaccatgcatttctacctcacaag gccgcagtggctgagccattacactggctcttggataaacaggctccttggcagtggacacaagtccatgaaaagagctt ttcagaggtcaaggccttgctttcctcaaatgctgtgttagctcatttcaatgagcaattgcctatatgcatagcctgtg atgcatccccttatggggttggggctgtgctgagccacctcaaggctgataggacgcaagtctctgtggcctactactcc agaactctctcatctgcagagcgtaattacgcgcagattgacagagaagccttggcaatagtggctggcataaagaaatt ccatgatttcttatatggctgccatttcacggtctacacagaccataagcctctgctgggtttgttcacaacaaacaaac aaacccctcatataatatcccctagaatgctgagatggtcaattttcctgtcagcatatgactatactctggtccacaaa ccaggcggagcggggcggcttcggtacccgcagagaatgaagaaagggcctggagtgggacgagccatcttgttctgcat tgaaaaaagtgataactccaagccccgaaggaggctgccttggcccttcccagggcttcctgctggaggagaggcaccag gagccagaggaagtggtgagaacaggaggaaaacagaggagcctcctcattgtgatgctgtccagatattttgggattac aatgcacatcatttccagaatagggtctccaagccactttcctccaaagagagagtgtggcggaatacttagcgtaaatt tgctggtcaaggctcttctctgtccccaaagcttgcttcagaagtggcagcccgcagtgggtgcaaacaatacgctgctc tgggcctccccttttccttccaatcagcttaaagcacaaaaaatcttcaaaggaacagaactgggacttcagatcatttc tgagatgacttgaagatgggaccaagtgacttgcctcctgagaacaatgcctgttcagtctctgcatggtatcctgagaa ggacaaagacttttgcacttcttccaaaatgttcctactggggtgtgagaataaggcaagcatccagttttcttttctgc tttttacaggtgcctgaattgtgattctgaaacttctgtcaagttcctgagggcaataaaaatattaaaacattctgcta tg |
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| Transcript ID | habu1_s7547_g18133.t3 |
| Definition | - |
>habu1_s7547_g18133.t3 agtcgagtcgagctggaagtgacattggaggtcttctagtccagccccctgctcagtctcttcttgaacatttccagtga tggagcgtcaacaatttttggggaattccagagtcagcgtgaaggcggaggccatgctcaagatgcagtgtaggagtttt gaagggctgctagatgtggtggtagttgggggtgatcatacgagtcttattggactcgattggttcgaggcccttgggat tcaagtgactggacttcacaatctgcaaacgtcaggccttgcagaagtttgcaaggagtttgctgatgtgttcagttcag agcttggctcgtacaaggggcctcccattgctttatgtttagacccagacatcacacccatcaggatcaagccccgaagg atgccttttgccctaaagaacaaaatagatgcagagctggacaagctgctccagcagggcatcttagaacctgtggactc tagtccatgggaaacccctatagtcacgccactgaaggccaatggagaagtccgaatttgtgcagactataaatgtacac taaataaggcattgcagcagcatgcctacctggtgcctgtggtgagccacattctggcctcactcaagggggggcaaatc ttggcaaagcttgatttggctcaggcctatcaacagctacctgttgatgaggcaacggctgaggcccaaacaattgtgac gcaccagggagactttaaagtaaaaaggctgcagtttggggttaatgtggcccctggaatattccagagtgtgatggagc gaacgctccatggtattcctggggtctatccctactttgatgatgtcctcattgctggggagtcatctgggaacttagct gaaaggctgagggttgtcttgctgcgtttccgccaagcagggctgaagctgaagcaagacaaatgtaagattggagttac ctccactgaatttctggggttccgtattgatgctgaaggcatccatcctgctgaatccaagctcaaagcaattcagcagg ccccaagtcccaagtccaaaagtgaacttcagttttttctgggactgttaaacttttaccatgcatttctacctcacaag gccgcagtggctgagccattacactggctcttggataaacaggctccttggcagtggacacaagtccatgaaaagagctt ttcagaggtcaaggccttgctttcctcaaatgctgtgttagctcatttcaatgagcaattgcctatatgcatagcctgtg atgcatccccttatggggttggggctgtgctgagccacctcaaggctgataggacgcaagtctctgtggcctactactcc agaactctctcatctgcagagcgtaattacgcgcagattgacagagaagccttggcaatagtggctggcataaagaaatt ccatgatttcttatatggctgccatttcacggtctacacagaccataagcctctgctgggcggagcggggcggcttcggt acccgcagagaatgaagaaagggcctggagtgggacgagccatcttgttctgcattgaaaaaagtgataactccaagccc cgaaggaggctgccttggcccttcccagggcttcctgctggaggagaggcaccaggagccagaggaagtggtgagaacag gaggaaaacagaggagcctcctcattgtgatgctgtccagatattttgggattacaatgcacatcatttccagaataggg tctccaagccactttcctccaaagagagagtgtggcggaatacttagcgtaaatttgctggtcaaggctcttctctgtcc ccaaagcttgcttcagaagtggcagcccgcagtgggtgcaaacaatacgctgctctgggcctccccttttccttccaatc agcttaaagcacaaaaaatcttcaaaggaacagaactgggacttcagatcatttctgagatgacttgaagatgggaccaa gtgacttgcctcctgagaacaatgcctgttcagtctctgcatggtatcctgagaaggacaaagacttttgcacttcttcc aaaatgttcctactggggtgtgagaataaggcaagcatccagttttcttttctgctttttacaggtgcctgaattgtgat tctgaaacttctgtcaagttcctgagggcaataaaaatattaaaacattctgctatg |
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Protein
| Protein ID | habu1_s7547_g18133.t1 |
|---|---|
| Definition | - |
>habu1_s7547_g18133.t1 MLKMQCRSFEGLLDVVVVGGDHTSLIGLDWFEALGIQVTGLHNLQTSGLAEVCKEFADVFSSELGSYKGPPIALCLDPDI TPIRIKPRRMPFALKNKIDAELDKLLQQGILEPVDSSPWETPIVTPLKANGEVRICADYKCTLNKALQQHAYLVPVVSHI LASLKGGQILAKLDLAQAYQQLPVDEATAEAQTIVTHQGDFKVKRLQFGVNVAPGIFQSVMERTLHGIPGVYPYFDDVLI AGESSGNLAERLRVVLLRFRQAGLKLKQDKCKIGVTSTEFLGFRIDAEGIHPAESKLKAIQQAPSPKSKSELQFFLGLLN FYHAFLPHKAAVAEPLHWLLDKQAPWQWTQVHEKSFSEVKALLSSNAVLAHFNEQLPICIACDASPYGVGAVLSHLKADR TQVSVAYYSRTLSSAERNYAQIDREALAIVAGIKKFHDFLYGCHFTVYTDHKPLLGLFTTNKQTPHIISPRMLRWSIFLS AYDYTLVHKPGGAGRLRYPQRMKKGPGVGRAILFCIEKSDNSKPRRRLPWPFPGLPAGGEAPGARGQWLQEVVRTGGKQR SLLIVMLSRYFGITMHIISRIGSPSHFPPKRECGGILSVNLLVKALLCPQSLLQKWQPAVGANNTLLWASPFPSNQLKAQ KIFKGTELGLQIISEMT |
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| Protein ID | habu1_s7547_g18133.t2 |
| Definition | - |
>habu1_s7547_g18133.t2 MLKMQCRSFEGLLDVVVVGGDHTSLIGLDWFEALGIQVTGLHNLQTSGLAEVCKEFADVFSSELGSYKGPPIALCLDPDI TPIRIKPRRMPFALKNKIDAELDKLLQQGILEPVDSSPWETPIVTPLKANGEVRICADYKCTLNKALQQHAYLVPVVSHI LASLKGGQILAKLDLAQAYQQLPVDEATAEAQTIVTHQGDFKVKRLQFGVNVAPGIFQSVMERTLHGIPGVYPYFDDVLI AGESSGNLAERLRVVLLRFRQAGLKLKQDKCKIGVTSTEFLGFRIDAEGIHPAESKLKAIQQAPSPKSKSELQFFLGLLN FYHAFLPHKAAVAEPLHWLLDKQAPWQWTQVHEKSFSEVKALLSSNAVLAHFNEQLPICIACDASPYGVGAVLSHLKADR TQVSVAYYSRTLSSAERNYAQIDREALAIVAGIKKFHDFLYGCHFTVYTDHKPLLGLFTTNKQTPHIISPRMLRWSIFLS AYDYTLVHKPGGAGRLRYPQRMKKGPGVGRAILFCIEKSDNSKPRRRLPWPFPGLPAGGEAPGARGSGENRRKTEEPPHC DAVQIFWDYNAHHFQNRVSKPLSSKERVWRNT |
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| Protein ID | habu1_s7547_g18133.t3 |
| Definition | - |
>habu1_s7547_g18133.t3 MLKMQCRSFEGLLDVVVVGGDHTSLIGLDWFEALGIQVTGLHNLQTSGLAEVCKEFADVFSSELGSYKGPPIALCLDPDI TPIRIKPRRMPFALKNKIDAELDKLLQQGILEPVDSSPWETPIVTPLKANGEVRICADYKCTLNKALQQHAYLVPVVSHI LASLKGGQILAKLDLAQAYQQLPVDEATAEAQTIVTHQGDFKVKRLQFGVNVAPGIFQSVMERTLHGIPGVYPYFDDVLI AGESSGNLAERLRVVLLRFRQAGLKLKQDKCKIGVTSTEFLGFRIDAEGIHPAESKLKAIQQAPSPKSKSELQFFLGLLN FYHAFLPHKAAVAEPLHWLLDKQAPWQWTQVHEKSFSEVKALLSSNAVLAHFNEQLPICIACDASPYGVGAVLSHLKADR TQVSVAYYSRTLSSAERNYAQIDREALAIVAGIKKFHDFLYGCHFTVYTDHKPLLGGAGRLRYPQRMKKGPGVGRAILFC IEKSDNSKPRRRLPWPFPGLPAGGEAPGARGSGENRRKTEEPPHCDAVQIFWDYNAHHFQNRVSKPLSSKERVWRNT |
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