Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s7547_g18140
Locus habu1_scaffold7547 : 401032 ... 454295 : -
To GenomeBrowser habu1_scaffold7547:401032..454295
Genes list of scaffold habu1_scaffold7547

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 11.8
Venom grand-1 5.5
Pit, infrared sensing 11.1
Nose 8.7
Brain-1 6.9
Eye 7.9
fetal fibroblast 17.0
venom gland-2 5.5
Brain-2 6.7
Spleen 8.9
Lung 17.9
Liver 5.1
Kidney 6.0
Pancreas 4.6
Small intestine 8.1
Large intestine 8.7
Stomach 6.6
heart 5.9
ovary 25.4
cheek muscle 2.9

Transcript
Transcript IDhabu1_s7547_g18140.t1
Definition-
>habu1_s7547_g18140.t1
gggggatgaaaaatcctgaaggcatctcagagagtgcagcgaatctggttccgagtgagggatccagactcctgttcatg
gaccagcagaggcccttccaggttctgttgaaatgatggccatggaccacaaagaggagagggtggaactagccctgggc
agctcatccattgctcctggggcaggatgtgtgcctttatccatccaaattctactcaaggcagttaacaatacaagtaa
aattcggataaagtggtatccatacattaggattggactctacatggggaacaatgcctaacggcttctgagtccaccaa
tacaagcccagggcagccacggcccgccttttgcattccacccaggagggatcgcagtggagatgaggaattcagaagag
caaacctcaacgacagttttacagcgtttgctgcaggagcagctccgatatgggaatcccaacgagagccgcagcctctt
tgctttgcaccagcaggccaccctgccttttgccagcagtgggggccccggggctcccaacgaagggctgagcaaccagg
accaccccattgggacccatgttgctcgccaggagccccagggccaggagattcaaatggacaacagtatcatggagaag
cagctctcgccaaggctccaaacaggtgaggacctcccgacctatgaagaagccaaagttcagtctcagtacttcagggg
tcaaccacatgcgagtgttggagccgcgttttatgtcaccggcgtctccaaccagaagatgaggaccgaagggcgcccca
cggtgcagcggctgagcccagggaaggtccaccaggatgaaggactgaaggatctcaagcagggtcacgtccgctccctg
agtgagcggttgatgcagctgtccctggccaccagcggcgtgaaggcccatgcccccgtcaccagcgccccgctttcccc
tctctcctcccagcagactaatgacttctacaagacttctggggcaggccctctgcagcccggggtgaaagggttagagc
acagggggcctcctcccgagtacccatacaagaatgtgtccagcccgtccatgagctgtaagccactggatcctgggcat
ttctatagtgactaccgcctgccccagcaaggacgctctgatgggcccacaatgaggtaccagcatccccctgaatacgg
ctcattccggcaaaacccagagattcaactgccattccaacaacgacttccccaccaccacagcccgacctcttcactga
cctctttggggtccctgacgctgttgccatcacttccgccttccaggctgtcgccttctcaacatcagccacctctgacc
cctagccacggagaccccttctctctgccccggacgcagcagctttttttgcccaaccagattcaccagggtgaccttta
tcgattctgccaacctcttactggacagcatcaaggggactcttactcggccctgcccaggcccccaccagcaccgtctc
cctatcagcaaatgccggtggacccctatgtcattgtctccagggcccagcagatggtggagatcctctccgaggagaac
aagtctctacggcaagagctggatggatgctatgaaaaagtagcaaggttgcaaaagctagaaacagaaatccaacaagt
ttcagaggcttataaaaatctggagaagtcttcttccaagcgggagtctctggaaaagaccatgagaaacaagctggaat
gtgaaatccgtagacttcatgattttaatcgtgacctcagagatcgtatggatactgctaataagcaacttgcagagaaa
gaatttgaaggcactgaggataacaggaaaaccatctcccagctctttgcacaaaataaagaaacacagagggagaagga
gaaactggaagtggagctagcaggtgttcgctcaactaatgaggagcaacggagacacattgagatccgtgaccaggcat
tgaacaatgcacaggccaaggtggtaaagcttgaggaagaactgaagaagaagcaggtttatgtggagaaggtggagaag
atgcagcaggcgctggttcagttgcaggcggcttgtgagaagcgggagcagctggagcaccggctcaggactcggctgga
aagagaactcgaatcgctccggatgcagcagcgccagggaagctctcagacggccaacgcctcctccgagtacagtgctg
ctggcctgatggagctcttgcgcgaaaaggaggagaggatcctggctctggaggcagacatgacgaagtgggagcagaag
tatctggaagaaagtgtcatgcgtcagttcgcactggatgcggcagccactgtggctgctcaccgagacacctctgtcat
cagcccttcgcccaacaccagctacgacacttccctggaagctcgcatccagaaggaagaggaggagatccttctggcta
accggaggtgccttgacatggagggcagaatcaagactcttcatgcgcagatcattgagaaggacgccatgatcaaggtc
cttcagcagcggtcccggaaggaggccagcaagactgaccagctgtcttccatgcggcctgccaagtccctcatctccat
ctccaacgctggctccggcttgctctcccactcctccacactcagcagcacccccatcctggaagagaagagggaggaca
agagctggaaaggcagcttaggtgttctgctgggaacagaatgccgctcggagtccatcccttccaccccctcaccggtt
cttccctccacgccgctgctctctgggcactccaaaacgggcagtcgggactgcagcactcagacggaccggggcagtga
gcagagcaaggcccctgccgcctcccctgcgccccccacagcaggaagactcccaatggtgaatctggcctacggggcag
acaaatcagatggctctgttttccattccagcaccctagaaaggaaaaactcacctcaaaatttggggcaggacctcaaa
gaaggagaaatggtggagtatcttatttgaaaagaacgtgctgaagacgtagcaagaataatttcttcggatacttttta
aaatagaaattacagttactgtctcataaaggaaccttttttatttgtgtatatagttttctctcaaagttatgaacagc
ttaacttataatttgttccaaaattattaaactagattaagaattgttttcct
Transcript IDhabu1_s7547_g18140.t2
Definition-
>habu1_s7547_g18140.t2
gggggatgaaaaatcctgaaggcatctcagagagtgcagcgaatctggttccgagtgagggatccagactcctgttcatg
gaccagcagaggcccttccaggttctgttgaaatgatggccatggaccacaaagaggagagggtggaactagccctgggc
agctcatgtgagtgcctgcctgccttaatccctgattatctccagattacgaagcacaacatttcttcccagccattgct
cctggggcaggatgtgtgcctttatccatccaaattctactcaaggcagttaacaatacaagtaaaattcggataaagtg
gtatccatacattaggattggactctacatggggaacaatgcctgtatttccagcacaccactttttggaagttgggcta
aaatgtggttcattataacagcatccaataatgtcatagaaatgtcaagctggatcaggccaactataaagcattttggg
tgttccagctct

Protein
Protein IDhabu1_s7547_g18140.t1
Definition-
>habu1_s7547_g18140.t1
MMAMDHKEERVELALGSSSIAPGAGCVPLSIQILLKAVNNTSKIRIKWYPYIRIGLYMGNNAXRLLSPPIQAQGSHGPPF
AFHPGGIAVEMRNSEEQTSTTVLQRLLQEQLRYGNPNESRSLFALHQQATLPFASSGGPGAPNEGLSNQDHPIGTHVARQ
EPQGQEIQMDNSIMEKQLSPRLQTGEDLPTYEEAKVQSQYFRGQPHASVGAAFYVTGVSNQKMRTEGRPTVQRLSPGKVH
QDEGLKDLKQGHVRSLSERLMQLSLATSGVKAHAPVTSAPLSPLSSQQTNDFYKTSGAGPLQPGVKGLEHRGPPPEYPYK
NVSSPSMSCKPLDPGHFYSDYRLPQQGRSDGPTMRYQHPPEYGSFRQNPEIQLPFQQRLPHHHSPTSSLTSLGSLTLLPS
LPPSRLSPSQHQPPLTPSHGDPFSLPRTQQLFLPNQIHQGDLYRFCQPLTGQHQGDSYSALPRPPPAPSPYQQMPVDPYV
IVSRAQQMVEILSEENKSLRQELDGCYEKVARLQKLETEIQQVSEAYKNLEKSSSKRESLEKTMRNKLECEIRRLHDFNR
DLRDRMDTANKQLAEKEFEGTEDNRKTISQLFAQNKETQREKEKLEVELAGVRSTNEEQRRHIEIRDQALNNAQAKVVKL
EEELKKKQVYVEKVEKMQQALVQLQAACEKREQLEHRLRTRLERELESLRMQQRQGSSQTANASSEYSAAGLMELLREKE
ERILALEADMTKWEQKYLEESVMRQFALDAAATVAAHRDTSVISPSPNTSYDTSLEARIQKEEEEILLANRRCLDMEGRI
KTLHAQIIEKDAMIKVLQQRSRKEASKTDQLSSMRPAKSLISISNAGSGLLSHSSTLSSTPILEEKREDKSWKGSLGVLL
GTECRSESIPSTPSPVLPSTPLLSGHSKTGSRDCSTQTDRGSEQSKAPAASPAPPTAGRLPMVNLAYGADKSDGSVFHSS
TLERKNSPQNLGQDLKEGEMVEYLI
Protein IDhabu1_s7547_g18140.t2
Definition-
>habu1_s7547_g18140.t2
MMAMDHKEERVELALGSSCECLPALIPDYLQITKHNISSQPLLLGQDVCLYPSKFYSRQLTIQVKFG

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Okinawa Institute of Science and Technology
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