Gene
| Gene Model ID | habu1_s7547_g18141 |
|---|---|
| Locus | habu1_scaffold7547 : 468485 ... 493348 : - |
| To GenomeBrowser | habu1_scaffold7547:468485..493348 |
| Genes list of scaffold | habu1_scaffold7547 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| phosphoglycerate kinase-like | EC:2.7.2.3 GO:0004618 GO:0005524 GO:0005694 GO:0005829 GO:0006094 GO:0006096 GO:0015976 GO:0016310 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7547_g18141.t1 | 1 | 1 | PGK | 6 | 391 | 0.0 | 487.9 | 0.0 | 0.0 | 487.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7547_g18141.t1 | gi|602644576|ref|XP_007428740.1| | PREDICTED: phosphoglycerate kinase-like [Python bivittatus] | 0.0 |
| habu1_s7547_g18141.t1 | gi|514726829|ref|XP_005015253.1| | PREDICTED: phosphoglycerate kinase-like [Anas platyrhynchos] | 0.0 |
| habu1_s7547_g18141.t1 | gi|45384486|ref|NP_990316.1| | phosphoglycerate kinase [Gallus gallus] | 0.0 |
| habu1_s7547_g18141.t1 | gi|327285067|ref|XP_003227256.1| | PREDICTED: phosphoglycerate kinase 1 [Anolis carolinensis] | 0.0 |
| habu1_s7547_g18141.t1 | gi|543368224|ref|XP_005527462.1| | PREDICTED: phosphoglycerate kinase-like [Pseudopodoces humilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 71.2 |
| Venom grand-1 | 86.7 |
| Pit, infrared sensing | 106.9 |
| Nose | 61.3 |
| Brain-1 | 73.2 |
| Eye | 71.4 |
| fetal fibroblast | 194.4 |
| venom gland-2 | 87.8 |
| Brain-2 | 102.1 |
| Spleen | 66.3 |
| Lung | 54.9 |
| Liver | 197.0 |
| Kidney | 143.7 |
| Pancreas | 96.3 |
| Small intestine | 77.6 |
| Large intestine | 102.1 |
| Stomach | 147.3 |
| heart | 265.5 |
| ovary | 117.0 |
| cheek muscle | 831.3 |
Transcript
| Transcript ID | habu1_s7547_g18141.t1 |
|---|---|
| Definition | - |
>habu1_s7547_g18141.t1 gctggcctcgtgccccgcagccgagccttgcagagcccccccgcccccggggaacctgcagggcggcaaagaggggggcg ggggcgggaggggctcttcgcccagccgagtcccgcgtggaaaggccttcagaagcgccaagcagtaaagtaatcacgag cccctttcctacaatacggctgatgaacggccggaggttgcaggttgatttcaatgtaccaatgaagaataacaaaataa ccaacaatcaaagaatcaaggcagcgatcccgagcatcaagcattgtttggacaatggagccaaatctgtagtattgatg agtcatctgggtcgacctgacggagttgcaatgcctgataaattctctttggaaccggtagtggctgaactcaaatcact gctttgcagagacgtcacattcctgaaagattgtgtgggttcagaggtagaggccgcttgtgccaatcctgcagatggct ccgttattctcttggaaaacctccgattccatgtagaagaagaaggaaaagggaaggatctttcgggcaataagatcaag gctgattctgcaaaagtggatgctttcagagcatcactttctaaattaggagatgtttacattaatgatgcttttggaac tgcacatagagctcacagttccatggttggggtcaatctgtctcaaaaagcggctggatttctaatgaagaaagagctgg attattttgccaaagccctagagaacccagagcacccctttctggcaatccttggaggagctaaggttcaggataagatt cagctaatcagtaacatgctggataaggtcaatgagatgattattggtggtggaatggccttcaccttcctcaaagtact caacaatatggagattggtaactctttgtttgatgaagaaggatcaaaaatagtcaaagatctgatggccaaagccgaga agaatggtgtccggatcactttgcctgttgactttatcactgcagataaatttgatgagagcgctaacactggggaagcg acattggcctctggcatccctgcaggctggatgggattggattgtggccctgaaagcattaagctctttgtcgaagctgt gggcagagccaagcaaatagtgtggaacggtccagttggtgtctttgagtgggagaagtttgccaaaggaaccaaagccg tgatggataaagtagtggaagttaccagcaaaggctgtatcaccattatcggtggaggagacactgctacctgctgtgct aaatggaatactgaagataaagttagccacgttagtaccggaggtggagccagtctggaacttctcgaaggtaaagttct tccaggtgtcgatgctctgagcagtgtgtaatgcatagaacgtggaataaataaacaccacttccctgactgt |
|
Protein
| Protein ID | habu1_s7547_g18141.t1 |
|---|---|
| Definition | - |
>habu1_s7547_g18141.t1 MNGRRLQVDFNVPMKNNKITNNQRIKAAIPSIKHCLDNGAKSVVLMSHLGRPDGVAMPDKFSLEPVVAELKSLLCRDVTF LKDCVGSEVEAACANPADGSVILLENLRFHVEEEGKGKDLSGNKIKADSAKVDAFRASLSKLGDVYINDAFGTAHRAHSS MVGVNLSQKAAGFLMKKELDYFAKALENPEHPFLAILGGAKVQDKIQLISNMLDKVNEMIIGGGMAFTFLKVLNNMEIGN SLFDEEGSKIVKDLMAKAEKNGVRITLPVDFITADKFDESANTGEATLASGIPAGWMGLDCGPESIKLFVEAVGRAKQIV WNGPVGVFEWEKFAKGTKAVMDKVVEVTSKGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALS SV |
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