Gene
| Gene Model ID | habu1_s7547_g18143 |
|---|---|
| Locus | habu1_scaffold7547 : 538459 ... 539781 : + |
| To GenomeBrowser | habu1_scaffold7547:538459..539781 |
| Genes list of scaffold | habu1_scaffold7547 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7547_g18143.t1 | 1 | 1 | Retrotrans_gag | 92 | 184 | 2.3e-12 | 46.8 | 9.1e-16 | 2.3e-12 | 46.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7547_g18143.t1 | gi|605052056|ref|NP_001278271.1| | retrotransposon-derived protein PEG10 isoform 2 [Leptonychotes weddellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.0 |
| Brain-1 | 0.1 |
| Eye | 0.1 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.1 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 0.0 |
| heart | 0.1 |
| ovary | 0.0 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s7547_g18143.t1 |
|---|---|
| Definition | - |
>habu1_s7547_g18143.t1 actctgtgacggacaaagctaaatctctggcgaagtagtttgctgtggattgaatttcaaactgtgtgtattgttttttg tttctgtgttctctgagtaaaagttcttggcaggcagatacggagctgctgccaagtttcttatctgtggcgtggagtgt ggagaagttatttaaccctcggctggctgtttgggtgtgtgtgtcagacggggacagaacatcttgtccgtcatgcgaac ataatccatcgttaacccacgatggaccaacagctgcagcagcaggtacagcagctgatagatgccaatcagctcctaca gcagcaagtggcccagttaaatgctcaacttgctttgggaaatgctcctgcagctcttcccccccctcctcctcctcccc gttcgagatgcccagtgaacgtgccagatagattttctgggcagacggagctgttcccggccttcatgggacaatgccaa ctctttatggcgatgaggcgggaggattttccggatgattgggctcgggtggcattcgtgattagcttcctttctggctc tgccgcccgatgggccacgcccctgttgttgcaaaacagcccattactctcggactatcagggctttttgaaacacctgt gcgtgatgtacaaggaccccctgcgcgttcagacggcagcgaggcgcatcaaggacctccgccaaggaaagcgtgccctg caggactatatcgctgagttccgacttctaggccaggactcggcttggaatgaggcggcgctgatggatgccttccagga tggcctctcagaagatctgcaggatgaactggttcggatggaggtgcctcagaccctcgacaccctggtgatccaatgcc tgcgcatcgacacccgtcttcaacggcgacggcctcgtcggccccttccggaaccaccgacagcttcggcacccccgcgt tttgcaccgacagtatcccggactaccccacgctttgtggcaacggctgaggagcccatggagctcggagcagctagacc tcaactgacggcccaggagcggatgcggagatgccaagggggattgtgcctctattgcggcgaggctggacattttgctg cctcgtgtcccaggaagcggagtggggcgctcaagcctgttccggaatctcggcgcgaccaaccgggaaatgggccaggc ctggcctaggggaaaccctaggccaggcacgtagccatgccccaccggagtcggcgactgtggactgtgagcccccttgg cacctgattctggacacccgggtgttgttggccaatcggtcgg |
|
Protein
| Protein ID | habu1_s7547_g18143.t1 |
|---|---|
| Definition | - |
>habu1_s7547_g18143.t1 MDQQLQQQVQQLIDANQLLQQQVAQLNAQLALGNAPAALPPPPPPPRSRCPVNVPDRFSGQTELFPAFMGQCQLFMAMRR EDFPDDWARVAFVISFLSGSAARWATPLLLQNSPLLSDYQGFLKHLCVMYKDPLRVQTAARRIKDLRQGKRALQDYIAEF RLLGQDSAWNEAALMDAFQDGLSEDLQDELVRMEVPQTLDTLVIQCLRIDTRLQRRRPRRPLPEPPTASAPPRFAPTVSR TTPRFVATAEEPMELGAARPQLTAQERMRRCQGGLCLYCGEAGHFAASCPRKRSGALKPVPESRRDQPGNGPGLA |
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