Gene
| Gene Model ID | habu1_s7547_g18146 |
|---|---|
| Locus | habu1_scaffold7547 : 655508 ... 663248 : - |
| To GenomeBrowser | habu1_scaffold7547:655508..663248 |
| Genes list of scaffold | habu1_scaffold7547 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein yipf6 | GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7547_g18146.t1 | 1 | 1 | Yip1 | 64 | 218 | 4.1e-16 | 58.9 | 5.5e-20 | 4.1e-16 | 58.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7547_g18146.t1 | gi|602658576|ref|XP_007434990.1| | PREDICTED: protein YIPF6-like [Python bivittatus] | 0.0 |
| habu1_s7547_g18146.t1 | gi|530566085|ref|XP_005279586.1| | PREDICTED: protein YIPF6 [Chrysemys picta bellii] | 0.0 |
| habu1_s7547_g18146.t1 | gi|591370981|ref|XP_007060311.1| | PREDICTED: protein YIPF6 [Chelonia mydas] | 0.0 |
| habu1_s7547_g18146.t1 | gi|729748321|ref|XP_010570666.1| | PREDICTED: protein YIPF6 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s7547_g18146.t1 | gi|529418726|ref|XP_005229234.1| | PREDICTED: protein YIPF6 [Falco peregrinus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 20.8 |
| Venom grand-1 | 38.2 |
| Pit, infrared sensing | 22.7 |
| Nose | 34.5 |
| Brain-1 | 24.9 |
| Eye | 29.7 |
| fetal fibroblast | 26.9 |
| venom gland-2 | 64.1 |
| Brain-2 | 18.3 |
| Spleen | 17.6 |
| Lung | 17.6 |
| Liver | 16.2 |
| Kidney | 12.7 |
| Pancreas | 33.8 |
| Small intestine | 13.2 |
| Large intestine | 17.2 |
| Stomach | 19.7 |
| heart | 20.8 |
| ovary | 35.1 |
| cheek muscle | 27.5 |
Transcript
| Transcript ID | habu1_s7547_g18146.t1 |
|---|---|
| Definition | - |
>habu1_s7547_g18146.t1 ctccgggctgcgctgcagtagccaggccgactggggaggcctttccggcgcccaagcgcggggaatccccggattcccct cggctttgcatgacgtcacgccccgcccccccggggccgcctcctggcctcgcgtcgtgcgtcgggaggaaccccgccca gtgacgtcatctcggcgccgtcacgcggcgatgacgtcatctccacgtcgccggtccacagccgcgggtcgagatggcgg cggcggcggcggcggccggagaggtggcggtgggcgacggagccacgaagccgctgtttgcaggtcttgcagatgtgtca atatcagaagacatccctgtagaaggagaaattactgttcctgtgggatctaataccccagacgaagactattccacatt agatgaaccagtaaaagagacagttatgcgagatttaaaagcagttggaaagaaatttgtccatgtcatgtatcccaaaa agagcagtgccctcctcagagactgggatttatggggtccattaatcctatgtgttttacttgcactaatgcttcaggga ggagcagcagatagtacagaagacagaggccctcagtttgcagaagtctttgttatcatctggtttggagcagttgtcat aacactaaattccaagctccttggaggaaccatatctttctttcagagcctttgtgtcctgggctactgcatcctgccac tcaccgtggctcttttagtgtgcaggcttgtactgatagcaaacagtgggactgctggcttcgttgtgcgtcttttagtt gtggtagcaatgtttggctggtcaactttagcctctaccgctttcctggcagacagccaacccccaaaccgcaaagctct cgttgtctaccccattttcctgttctacttcgtcatcagttggatgatcctcacctttacgccatagtgaaggtgctctc agcaaagacgacaaaaccgaatgaaggtgtttttgttgcttttcaatgaaaacctctctctgtggttgacctgcctgcct cttgctctgtttctgccgatatttataatgaatgctgtgaaaaggctggcaggttccatgtcggaaaccacaaactgctc ttactcctatttctttgaagagcactactgatatctccttgctgagttctgttttctactgattctgtgtcagcctccag tcaggagaatggctaaatgtaatcctatcttggccatcgagattgttgacaaaagaaaagactgactatctagagttaac tgatttatcagaaggccacagttctttaggagaatactatgttacagtttcaaaatatttgctttcttgggatgggaaat gctatccaatttcacttattgtccaaaaactaaaagggaacaggcgcagaaagattgtctttttcagttttttcatccgt ttttagttgttcaaatcagtgcagtctcttcactccctgcgcattggttcaaagggccttgtggaagaagacaagaaaag agccatttggcctagatcagccacaagagaccttggatctctctttaatgcaggaggaaaaaagaagctgcaccagacta gtcagcagttaagggcagagaggcagagtggttgtggcacgggaggttttgattctggaaacatgaaacacagagttcaa cttctgacctccgagtggagcctggtcatccgaaaggatttcagctgcatcagatctggcatcccaccccgtgtcccgta gggatggcctttcttatagaatgacttgtgaaaagggccatgggtttctctgcgagttctggctttttaattataaaacg gggaagctatttatttagtaaggtagggcacaagctgggctttttgggttctgcacgttcacatccattgtgaaggttct ggaagaagctgctcttgaaacgaaattcttcctgtctagccagatgtaggcggtagttgacagcttatacgtgatttaat tctcatggtgtaattaataccttattttatattattacctattaaattaattttattttgttgcatacttgttggggttt tgaagagtaaaactgttctctctatatataaattacttctttgtgtttcttactgaaaatatctgctgttttttctttac tatgagtttcataggcccctttttattttctcctaaaattccagctattgggcttttgtttctctcaattaaatgaagtc tgggataaattgctttgttctccttgctctatttgccatcaaatgtaaaaaaaaaagggcaagttgatatggaatattat ttctatgcaaatgtaaaggtatctgcagggagacttaaaagaacctctttaagttacttctgcttataacaaactgaatt taaataatctctgtgtaagaaaagttctttttaaaatacttgctgtttttttccagaggaatttaagaaaaggggcccta cagatccattaaaattaattttccttgtgaaattt |
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Protein
| Protein ID | habu1_s7547_g18146.t1 |
|---|---|
| Definition | - |
>habu1_s7547_g18146.t1 MAAAAAAAGEVAVGDGATKPLFAGLADVSISEDIPVEGEITVPVGSNTPDEDYSTLDEPVKETVMRDLKAVGKKFVHVMY PKKSSALLRDWDLWGPLILCVLLALMLQGGAADSTEDRGPQFAEVFVIIWFGAVVITLNSKLLGGTISFFQSLCVLGYCI LPLTVALLVCRLVLIANSGTAGFVVRLLVVVAMFGWSTLASTAFLADSQPPNRKALVVYPIFLFYFVISWMILTFTP |
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