Gene
| Gene Model ID | habu1_s7599_g18192 |
|---|---|
| Locus | habu1_scaffold7599 : 17106 ... 30127 : + |
| To GenomeBrowser | habu1_scaffold7599:17106..30127 |
| Genes list of scaffold | habu1_scaffold7599 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alcohol dehydrogenase 1-like isoform x1 | EC:1.1.1.105 EC:1.1.1.284 GO:0004024 GO:0004745 GO:0006069 GO:0008270 GO:0019841 GO:0035276 GO:0042572 GO:0051903 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7599_g18192.t2 | 1 | 1 | ADH_N | 11 | 132 | 5.4e-26 | 90.4 | 1.5e-29 | 5.4e-26 | 90.4 |
| habu1_s7599_g18192.t2 | 1 | 1 | ADH_zinc_N | 174 | 304 | 1.5e-22 | 79.5 | 6.5e-26 | 2.4e-22 | 78.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7599_g18192.t2 | gi|558165943|ref|XP_006123940.1| | PREDICTED: alcohol dehydrogenase 1-like isoform X1 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.4 |
| Venom grand-1 | 5.4 |
| Pit, infrared sensing | 2.7 |
| Nose | 2.0 |
| Brain-1 | 1.7 |
| Eye | 2.1 |
| fetal fibroblast | 3.4 |
| venom gland-2 | 6.0 |
| Brain-2 | 1.3 |
| Spleen | 2.4 |
| Lung | 3.6 |
| Liver | 41.4 |
| Kidney | 23.8 |
| Pancreas | 6.9 |
| Small intestine | 13.1 |
| Large intestine | 5.8 |
| Stomach | 8.2 |
| heart | 6.2 |
| ovary | 11.2 |
| cheek muscle | 7.7 |
Transcript
| Transcript ID | habu1_s7599_g18192.t1 |
|---|---|
| Definition | - |
>habu1_s7599_g18192.t1 tactgtagtcgcttttattttctccccccaattttccaaagcgataggccagggttttccgaaagcgagtggaaagatct tcgtgcagtacggtagctagtttgcagacatggacacttctgggaaagttatcaaatgtagagcagctgtggcttgggaa gtcggcaaaccgctttctattgaagaggtagaagtggctccaccaaggtctcatgaagttcgtgttaagataatagccac cggaatatgtgggacagattaccatgttctagaaggttctttccccaaagtagagtatcctgtaattcctggccatgaag gagctggaatagtagagagtattgggccaggagtgacatgtgtgaaaccaggagacaaagtgattcccctttgtctgccc cagtgtggagaatgcaactcatgtttaaaatcaaacaccaactgttgcctgaaaactcacatttctgaaccacaaaatct gatgcctgacaagactagtagattcagttgcaaagggaaacaagttcatcacttcttatggattagcactttctctcaat atacagtcatgcctgactctaccgtagttaaaattgatgatactgcacctttggataaagtctgcctttttggctgtgga ttctctactggttatggggctgtcctcaatacagctcaggttacacctggatccacctgtgcggtttttggtttgggagg agttggtctctctgtggtcatgggatgcaaaacagctggagcatctcgtatcattgggattgacattaatagcgacaaat ttggaaaggcaaaagaactgggagctacggaatgtatcaaccctcaagattacaagaaacccattcaagaagtaattgtg gaaatgactggacatggtgtagattatgcctttgaggttgttggatgtttggagacactgacagctgctttggcctcttg tcacatgggctgtgggacctgtgtgatgattggtctgcccccctcaggtgcaaaattctccttggatcctatcctgctta ttacagggcgcactctaaaagggagtttcattggaggctggaagatgaaagattcaattcctcaattagtctccagttac atagaaggaaaatttaaaccagatgttctgatcagccacattttaccattcagtgatattgggaaaggatttgacttgct tcgtgctggaaagagcattcgtactgtcttgaagttttaagtggctcaacttgctgaatctgtctggaagtctttaacgt ggaaccacgaagaatactcttttccttggccctatgtttgttctgaaaatactggaaaaagacattcgtgttttgtttct ctgggtgcttatatttaggtcgtagcataaattatatgatttataagatggaa |
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| Transcript ID | habu1_s7599_g18192.t2 |
| Definition | - |
>habu1_s7599_g18192.t2 tactgtagtcgcttttattttctccccccaattttccaaagcgataggccagggttttccgaaagcgagtggaaagatct tcgtgcagtacggtagctagtttgcagacatggacacttctgggaaagttatcaaatgtagagcagctgtggcttgggaa gtcggcaaaccgctttctattgaagaggtagaagtggctccaccaaggtctcatgaagttcgtgttaaggtagatcaatt tttctgaataattttccctggtcctctattttggaaagcactgttttgttcttaaaggaaaactacaacgtgtcacttcc attaatttatttttcaagcatttgcaaagcagatttctaaataaatacctatacattggcaacccttgaaaggcgaagag aaaagtaaatgggaattgtgtttcagtcacagaccatgataatagccaccggaatatgtgggacagattaccatgttcta gaaggttctttccccaaagtagagtatcctgtaattcctggccatgaaggagctggaatagtagagagtattgggccagg agtgacatgtgtgaaaccaggagacaaagtgattcccctttgtctgccccagtgtggagaatgcaactcatgtttaaaat caaacaccaactgttgcctgaaaactcacatttctgaaccacaaaatctgatgcctgacaagactagtagattcagttgc aaagggaaacaagttcatcacttcttatggattagcactttctctcaatatacagtcatgcctgactctaccgtagttaa aattgatgatactgcacctttggataaagtctgcctttttggctgtggattctctactggttatggggctgtcctcaata cagctcaggttacacctggatccacctgtgcggtttttggtttgggaggagttggtctctctgtggtcatgggatgcaaa acagctggagcatctcgtatcattgggattgacattaatagcgacaaatttggaaaggcaaaagaactgggagctacgga atgtatcaaccctcaagattacaagaaacccattcaagaagtaattgtggaaatgactggacatggtgtagattatgcct ttgaggttgttggatgtttggagacactgacagctgctttggcctcttgtcacatgggctgtgggacctgtgtgatgatt ggtctgcccccctcaggtgcaaaattctccttggatcctatcctgcttattacagggcgcactctaaaagggagtttcat tggaggctggaagatgaaagattcaattcctcaattagtctccagttacatagaaggaaaatttaaaccagatgttctga tcagccacattttaccattcagtgatattgggaaaggatttgacttgcttcgtgctggaaagagcattcgtactgtcttg aagttttaagtggctcaacttgctgaatctgtctggaagtctttaacgtggaaccacgaagaatactcttttccttggcc ctatgtttgttctgaaaatactggaaaaagacattcgtgttttgtttctctgggtgcttatatttaggtcgtagcataaa ttatatgatttataagatggaa |
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Protein
| Protein ID | habu1_s7599_g18192.t1 |
|---|---|
| Definition | - |
>habu1_s7599_g18192.t1 MDTSGKVIKCRAAVAWEVGKPLSIEEVEVAPPRSHEVRVKIIATGICGTDYHVLEGSFPKVEYPVIPGHEGAGIVESIGP GVTCVKPGDKVIPLCLPQCGECNSCLKSNTNCCLKTHISEPQNLMPDKTSRFSCKGKQVHHFLWISTFSQYTVMPDSTVV KIDDTAPLDKVCLFGCGFSTGYGAVLNTAQVTPGSTCAVFGLGGVGLSVVMGCKTAGASRIIGIDINSDKFGKAKELGAT ECINPQDYKKPIQEVIVEMTGHGVDYAFEVVGCLETLTAALASCHMGCGTCVMIGLPPSGAKFSLDPILLITGRTLKGSF IGGWKMKDSIPQLVSSYIEGKFKPDVLISHILPFSDIGKGFDLLRAGKSIRTVLKF |
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| Protein ID | habu1_s7599_g18192.t2 |
| Definition | - |
>habu1_s7599_g18192.t2 MGIVFQSQTMIIATGICGTDYHVLEGSFPKVEYPVIPGHEGAGIVESIGPGVTCVKPGDKVIPLCLPQCGECNSCLKSNT NCCLKTHISEPQNLMPDKTSRFSCKGKQVHHFLWISTFSQYTVMPDSTVVKIDDTAPLDKVCLFGCGFSTGYGAVLNTAQ VTPGSTCAVFGLGGVGLSVVMGCKTAGASRIIGIDINSDKFGKAKELGATECINPQDYKKPIQEVIVEMTGHGVDYAFEV VGCLETLTAALASCHMGCGTCVMIGLPPSGAKFSLDPILLITGRTLKGSFIGGWKMKDSIPQLVSSYIEGKFKPDVLISH ILPFSDIGKGFDLLRAGKSIRTVLKF |
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