Gene
| Gene Model ID | habu1_s7599_g18196 |
|---|---|
| Locus | habu1_scaffold7599 : 102856 ... 118226 : + |
| To GenomeBrowser | habu1_scaffold7599:102856..118226 |
| Genes list of scaffold | habu1_scaffold7599 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| eukaryotic translation initiation factor 4e | GO:0000082 GO:0000932 GO:0003743 GO:0005840 GO:0005845 GO:0006446 GO:0010494 GO:0016281 GO:0016442 GO:0033391 GO:0044822 GO:0045931 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7599_g18196.t2 | 1 | 1 | IF4E | 45 | 207 | 0.0 | 195.7 | 0.0 | 0.0 | 195.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7599_g18196.t2 | gi|698421422|ref|XP_009695552.1| | PREDICTED: eukaryotic translation initiation factor 4E [Cariama cristata] | 0.0 |
| habu1_s7599_g18196.t2 | gi|697825206|ref|XP_009633058.1| | PREDICTED: eukaryotic translation initiation factor 4E [Egretta garzetta] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 31.2 |
| Venom grand-1 | 18.8 |
| Pit, infrared sensing | 28.7 |
| Nose | 27.8 |
| Brain-1 | 26.7 |
| Eye | 23.9 |
| fetal fibroblast | 110.8 |
| venom gland-2 | 44.7 |
| Brain-2 | 27.7 |
| Spleen | 17.5 |
| Lung | 18.7 |
| Liver | 17.4 |
| Kidney | 18.9 |
| Pancreas | 12.7 |
| Small intestine | 14.1 |
| Large intestine | 20.1 |
| Stomach | 16.5 |
| heart | 35.6 |
| ovary | 42.2 |
| cheek muscle | 55.0 |
Transcript
| Transcript ID | habu1_s7599_g18196.t1 |
|---|---|
| Definition | - |
>habu1_s7599_g18196.t1 cgcctccacgtgactccccaccggccaatcgttttcgaacctgatttgttatccgccttccccttttacctctctcctcc cctcagcgcttgtgcgatcagagcgatctaagatggcgacggtggaaccggaaaccatttctaaccctcagacttcagaa gaagagaaaactgagacatcagcaagtcaggagattgtgaatcctgaaacatacgttaagcatccattacaaaacaggtg ggcactttggttctttaaaaatgataaaagtaaaacttggcaagcaaatcttcgtctgatctcaaagtttgatactgttg aagatttttgggcgttatataaccatattcagctctctagtaatttaatgcctggttgtgattattcactttttaaggat ggtattgaacccatgtgggaagatgagaagaataaacggggagggagatggctaattacactaaataagcagcagagacg aagtgatcttgatcgcttctggctagagacactgctgtgccttattggagaatcctttgatgactacagtgatgatgtat gtggagctgttgttaatgttagaaccaagggggataaaatagcaatatggactactgaatgtgaaaacagagatgctgtt acacatatagggagagtatacaaggaaaggttaggacttcctcaaaagatagtgattggttaccagtcccatgctgacac agctactaaaagtggttccaccactaaaaatagcatgatcattgctgtaattgatgctgatggctgctagatttaattta tttgtttcccttttctgataacattagtgatattctgatttcggttcttgctcatgtaacattggtgaaggatctgggaa tatgacaaaaggtttaataaacataattttgtgcattctatgg |
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| Transcript ID | habu1_s7599_g18196.t2 |
| Definition | - |
>habu1_s7599_g18196.t2 cgcctccacgtgactccccaccggccaatcgttttcgaacctgatttgttatccgccttccccttttacctctctcctcc cctcagcgcttgtgcgatcagagcgatctaagatggcgacggtggaaccgagttggcataatttacaagtgtattatttt tctagtccataaatgttgccaggatgatgcaaggtttttaagctcagaagaaaaaataaactacggaatgatccataatt actactagattacagccttaagcgtgtttgcctttttggaaacttcttttctgataaactttgcacattcctaattttta tactgtgagcattattagtttccaatgcaaatagaggaaaaaagtacatgtacatagaagacttacatgaatgacatttt taaaaactttgaatcatcatgaatgaaagccattctaggttatgtagttcagtaaaggaaaccatttctaaccctcagac ttcagaagaagagaaaactgagacatcagcaagtcaggagattgtgaatcctgaaacatacgttaagcatccattacaaa acaggtgggcactttggttctttaaaaatgataaaagtaaaacttggcaagcaaatcttcgtctgatctcaaagtttgat actgttgaagatttttgggcgttatataaccatattcagctctctagtaatttaatgcctggttgtgattattcactttt taaggatggtattgaacccatgtgggaagatgagaagaataaacggggagggagatggctaattacactaaataagcagc agagacgaagtgatcttgatcgcttctggctagagacactgctgtgccttattggagaatcctttgatgactacagtgat gatgtatgtggagctgttgttaatgttagaaccaagggggataaaatagcaatatggactactgaatgtgaaaacagaga tgctgttacacatatagggagagtatacaaggaaaggttaggacttcctcaaaagatagtgattggttaccagtcccatg ctgacacagctactaaaagtggttccaccactaaaaatagcatgatcattgctgtaattgatgctgatggctgctagatt taatttatttgtttcccttttctgataacattagtgatattctgatttcggttcttgctcatgtaacattggtgaaggat ctgggaatatgacaaaaggtttaataaacataattttgtgcattctatgg |
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Protein
| Protein ID | habu1_s7599_g18196.t1 |
|---|---|
| Definition | - |
>habu1_s7599_g18196.t1 MATVEPETISNPQTSEEEKTETSASQEIVNPETYVKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQ LSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRTKG DKIAIWTTECENRDAVTHIGRVYKERLGLPQKIVIGYQSHADTATKSGSTTKNSMIIAVIDADGC |
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| Protein ID | habu1_s7599_g18196.t2 |
| Definition | - |
>habu1_s7599_g18196.t2 MNESHSRLCSSVKETISNPQTSEEEKTETSASQEIVNPETYVKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFW ALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAV VNVRTKGDKIAIWTTECENRDAVTHIGRVYKERLGLPQKIVIGYQSHADTATKSGSTTKNSMIIAVIDADGC |
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