Gene
| Gene Model ID | habu1_s7599_g18197 |
|---|---|
| Locus | habu1_scaffold7599 : 172516 ... 207533 : + |
| To GenomeBrowser | habu1_scaffold7599:172516..207533 |
| Genes list of scaffold | habu1_scaffold7599 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tetraspanin-5 isoform x2 | GO:0005886 GO:0016021 GO:0019899 GO:0045747 GO:0051604 GO:0090002 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7599_g18197.t2 | 1 | 1 | Tetraspannin | 2 | 244 | 3.36312e-44 | 150.7 | 0.0 | 4.06377e-44 | 150.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7599_g18197.t2 | gi|635043874|ref|XP_007997518.1| | PREDICTED: tetraspanin-5 isoform X4 [Chlorocebus sabaeus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.6 |
| Venom grand-1 | 2.4 |
| Pit, infrared sensing | 4.0 |
| Nose | 2.0 |
| Brain-1 | 23.5 |
| Eye | 7.9 |
| fetal fibroblast | 5.4 |
| venom gland-2 | 0.3 |
| Brain-2 | 21.3 |
| Spleen | 0.7 |
| Lung | 2.1 |
| Liver | 0.2 |
| Kidney | 0.2 |
| Pancreas | 0.5 |
| Small intestine | 0.6 |
| Large intestine | 1.7 |
| Stomach | 1.9 |
| heart | 2.9 |
| ovary | 58.3 |
| cheek muscle | 8.7 |
Transcript
| Transcript ID | habu1_s7599_g18197.t1 |
|---|---|
| Definition | - |
>habu1_s7599_g18197.t1 gcattaaaaaggttgagaaccactggcctaatgttcctgggcatagcatttcttggaataggactttgggcatggaatga aaaaggggtgctgtccaacatctcttccattactgacctgggtggctttgatccagtttggctcttccttgtggttggag gagtgatgttcatattgggctttgcaggatgcatcggtgctctgcgggagaacacttttcttctcaagtttttctcagtc ttccttggaataatcttcttcctggaactcacagcgggagttctggcatttgttttcaaagactggatcaaagaccagct gtatttctttatcaacaacaatatccgagcatacagagatgacattgatttgcaaaatctcatagactttacccaagaat attggcagtgctgtggggcctttggggctgatgactggaacctcaacatttacttcaactgcacagacaccaatgctagt cgagaacggtgtggagtacctttctcttgctgcactaaagatcctgctgaagatgtcattaatactcagtgtggttatga tgcccgacaaaaaccagaagtggatcaacagattgttatttacacaaaaggctgtgtcccacagtttgaaaaatggctgc aggacaacttgaccatagtagccggcatattcattggaattgcattattacagatatttggcatatgcttggctcaaaac ttggttagtgatattgaagctgtccgagccagttggtaaaaactctttaacgtaacccacataagatcttgttttgtagt ttttatttgtttacgattgtaagccatccagctctaccctgtggtaagatgggtggccaataaaatttacaaacaaataa atggcc |
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| Transcript ID | habu1_s7599_g18197.t2 |
| Definition | - |
>habu1_s7599_g18197.t2 gcattaaaaaggttgagaaccactggcctaatgttcctgggcatagcatttcttggaataggactttgggcatggaatga aaaaggggtgctgtccaacatctcttccattactgacctgggtggctttgatccagtttggctcttccttgtggttggag gagtgatgttcatattgggctttgcaggatgcatcggtgctctgcgggagaacacttttcttctcaagtttttctcagtc ttccttggaataatcttcttcctggaactcacagcgggagttctggcatttgttttcaaagactggatcaaagaccagct gtatttctttatcaacaacaatatccgagcatacagagatgacattgatttgcaaaatctcatagactttacccaagaat attggcagtgctgtggggcctttggggctgatgactggaacctcaacatttacttcaactgcacagacaccaatgctagt cgagaacggtgtggagtacctttctcttgctgcactaaagatcctgctacaaacctggcccatccctctggaatggagaa gaaagaagatgtcattaatactcagtgtggttatgatgcccgacaaaaaccagaagtggatcaacagattgttatttaca caaaaggctgtgtcccacagtttgaaaaatggctgcaggacaacttgaccatagtagccggcatattcattggaattgca ttattacagatatttggcatatgcttggctcaaaacttggttagtgatattgaagctgtccgagccagttggtaaaaact ctttaacgtaacccacataagatcttgttttgtagtttttatttgtttacgattgtaagccatccagctctaccctgtgg taagatgggtggccaataaaatttacaaacaaataaatggcc |
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Protein
| Protein ID | habu1_s7599_g18197.t1 |
|---|---|
| Definition | - |
>habu1_s7599_g18197.t1 MFLGIAFLGIGLWAWNEKGVLSNISSITDLGGFDPVWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLEL TAGVLAFVFKDWIKDQLYFFINNNIRAYRDDIDLQNLIDFTQEYWQCCGAFGADDWNLNIYFNCTDTNASRERCGVPFSC CTKDPAEDVINTQCGYDARQKPEVDQQIVIYTKGCVPQFEKWLQDNLTIVAGIFIGIALLQIFGICLAQNLVSDIEAVRA SW |
|
| Protein ID | habu1_s7599_g18197.t2 |
| Definition | - |
>habu1_s7599_g18197.t2 MFLGIAFLGIGLWAWNEKGVLSNISSITDLGGFDPVWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLEL TAGVLAFVFKDWIKDQLYFFINNNIRAYRDDIDLQNLIDFTQEYWQCCGAFGADDWNLNIYFNCTDTNASRERCGVPFSC CTKDPATNLAHPSGMEKKEDVINTQCGYDARQKPEVDQQIVIYTKGCVPQFEKWLQDNLTIVAGIFIGIALLQIFGICLA QNLVSDIEAVRASW |
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