Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s7599_g18199
Locus habu1_scaffold7599 : 318436 ... 374462 : +
To GenomeBrowser habu1_scaffold7599:318436..374462
Genes list of scaffold habu1_scaffold7599

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.3
Venom grand-1 0.2
Pit, infrared sensing 0.4
Nose 1.7
Brain-1 0.5
Eye 0.3
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.6
Spleen 0.0
Lung 0.4
Liver 0.1
Kidney 0.4
Pancreas 0.2
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.9
cheek muscle 0.0

Transcript
Transcript IDhabu1_s7599_g18199.t1
Definition-
>habu1_s7599_g18199.t1
cgacggctgcacctgctgccgcgagccggcgacatgtacgaccgggctccccgctccttccctctgccggtgggctgcac
gagcccccacctaggccccggctgctacgacttgccttcccagaacagacagatccgaggtggctatgccccctttcttt
ctctggcaagtcgtgggcttgaagttatttctcaaaatgatgaggatgatcttccagggccaggatcctatgagattaat
agaatacagaaaactattaaaggaggcaaaagtcctcaaaacaaggaaaagcgttttaaagttataattaatgatacacc
tggtcctggaacatactgccaacctccttcattgagtccagaagatagtaagacaaaaagaccattgaaaatgccttctg
cacggaaaattgcaggctgtatcaaatattttcgaaagtcagaggctccatccattccttctcaaggacaagcatttggt
tatgaagaggctgaagatgggacacttataaaatttatccagcctgtaagagacagtacattgggaccagcatactatca
aacagtatataatgaaacgtatccaactttgaaatataaaggggtccattttggcaatttgacagaaaagcgtcttgaat
ttaagccacatgagggccctggacctgcatactatgatataattccggaaagtgcagtgcattgtgaaaatgtcaacatc
aagaaggaagacaagaaaaaatgtgttctctatattccacggtatcatgaagaaatagtattacaggaagaaaaaaaggg
tattccaggtcccggtaaatataatataaaaagtcagtttgggaaggcagatagcatcatgaaaagcgaagctcagcatg
ttccttttctttctctttctgagaggtttgcccctgtgaaatcttatactccagctcctggcacatacgatgaaacacgc
tctgctcttgaatatttgagaagaccgtgtaggtcaaaaagcatcccatttggccatacctcagttcgattcaccgaaga
taccagattgcaaacatcaccaggtcctgcattttataatatccgcaattacagaattgcaacacccaaccttaaaaatg
ttctcacagagacaaaaaagaaaggagcatttggatctacagttcctcgattgttatatttagttaagagggaagctttt
gctacacctggaccagctgattatcagatgaaacaagctgtggaacaatcacataagaagaaaaaggaattatctgtttt
tgtatcaacaattgagagaattccagcaatccactcaaatcttttgacaaatcacctaattcaacaagaacaatgatgtt
ggatcctttattaaatggtttcgctaaagccaggttactttttataacaggtaatccaccattccatatagtttcttctg
gcgtgcagaatttccgacctccccccggccttcgcatcctgccatcagtttgcgttttataaaaaaagttgtggactaat
atagtgttgtagaccctaacccttcatttccttatcatgggacacagccagtctttttactttcaaagtacagattaaaa
gttcttttctgttcagttctt
Transcript IDhabu1_s7599_g18199.t2
Definition-
>habu1_s7599_g18199.t2
cgacggctgcacctgctgccgcgagccggcgacatgtacgaccgggctccccgctccttccctctgccggtgggctgcac
gagcccccacctaggccccggctgctacgacttgccttcccagaacagacagatccgagacctttacagcctccagacac
cagaaagaaccttgataccttcacttggacagcctggatggagatggatacctgagtatgttgtgtatatctttgctgta
ttcgtcctgtgtggctatgccccctttctttctctggcaagtcgtgggcttgaagttatttctcaaaatgatgaggatga
tcttccagggccaggatcctatgagattaatagaatacagaaaactattaaaggaggcaaaagtcctcaaaacaaggaaa
agcgttttaaagttataattaatgatacacctggtcctggaacatactgccaacctccttcattgagtccagaagatagt
aagacaaaaagaccattgaaaatgccttctgcacggaaaattgcaggctgtatcaaatattttcgaaagtcagaggctcc
atccattccttctcaaggacaagcatttggttatgaagaggctgaagatgggacacttataaaatttatccagcctgtaa
gagacagtacattgggaccagcatactatcaaacagtatataatgaaacgtatccaactttgaaatataaaggggtccat
tttggcaatttgacagaaaagcgtcttgaatttaagccacatgagggccctggacctgcatactatgatataattccgga
aagtgcagtgcattgtgaaaatgtcaacatcaagaaggaagacaagaaaaaatgtgttctctatattccacggtatcatg
aagaaatagtattacaggaagaaaaaaagggtattccaggtcccggtaaatataatataaaaagtcagtttgggaaggca
gatagcatcatgaaaagcgaagctcagcatgttccttttctttctctttctgagaggtttgcccctgtgaaatcttatac
tccagctcctggcacatacgatgaaacacgctctgctcttgaatatttgagaagaccgtgtaggtcaaaaagcatcccat
ttggccatacctcagttcgattcaccgaagataccagattgcaaacatcaccaggtcctgcattttataatatccgcaat
tacagaattgcaacacccaaccttaaaaatgttctcacagagacaaaaaagaaaggagcatttggatctacagttcctcg
attgttatatttagttaagagggaagcttttgctacacctggaccagctgattatcagatgaaacaagctgtggaacaat
cacataagaagaaaaaggaattatctgtttttgtatcaacaattgagagaattccagcaatccactcaaatcttttgaca
aatcacctaattcaacaagaacaatgatgttggatcctttattaaatggtttcgctaaagccaggttactttttataaca
ggtaatccaccattccatatagtttcttctggcgtgcagaatttccgacctccccccggccttcgcatcctgccatcagt
ttgcgttttataaaaaaagttgtggactaatatagtgttgtagaccctaacccttcatttccttatcatgggacacagcc
agtctttttactttcaaagtacagattaaaagttcttttctgttcagttctt

Protein
Protein IDhabu1_s7599_g18199.t1
Definition-
>habu1_s7599_g18199.t1
MYDRAPRSFPLPVGCTSPHLGPGCYDLPSQNRQIRGGYAPFLSLASRGLEVISQNDEDDLPGPGSYEINRIQKTIKGGKS
PQNKEKRFKVIINDTPGPGTYCQPPSLSPEDSKTKRPLKMPSARKIAGCIKYFRKSEAPSIPSQGQAFGYEEAEDGTLIK
FIQPVRDSTLGPAYYQTVYNETYPTLKYKGVHFGNLTEKRLEFKPHEGPGPAYYDIIPESAVHCENVNIKKEDKKKCVLY
IPRYHEEIVLQEEKKGIPGPGKYNIKSQFGKADSIMKSEAQHVPFLSLSERFAPVKSYTPAPGTYDETRSALEYLRRPCR
SKSIPFGHTSVRFTEDTRLQTSPGPAFYNIRNYRIATPNLKNVLTETKKKGAFGSTVPRLLYLVKREAFATPGPADYQMK
QAVEQSHKKKKELSVFVSTIERIPAIHSNLLTNHLIQQEQ
Protein IDhabu1_s7599_g18199.t2
Definition-
>habu1_s7599_g18199.t2
MYDRAPRSFPLPVGCTSPHLGPGCYDLPSQNRQIRDLYSLQTPERTLIPSLGQPGWRWIPEYVVYIFAVFVLCGYAPFLS
LASRGLEVISQNDEDDLPGPGSYEINRIQKTIKGGKSPQNKEKRFKVIINDTPGPGTYCQPPSLSPEDSKTKRPLKMPSA
RKIAGCIKYFRKSEAPSIPSQGQAFGYEEAEDGTLIKFIQPVRDSTLGPAYYQTVYNETYPTLKYKGVHFGNLTEKRLEF
KPHEGPGPAYYDIIPESAVHCENVNIKKEDKKKCVLYIPRYHEEIVLQEEKKGIPGPGKYNIKSQFGKADSIMKSEAQHV
PFLSLSERFAPVKSYTPAPGTYDETRSALEYLRRPCRSKSIPFGHTSVRFTEDTRLQTSPGPAFYNIRNYRIATPNLKNV
LTETKKKGAFGSTVPRLLYLVKREAFATPGPADYQMKQAVEQSHKKKKELSVFVSTIERIPAIHSNLLTNHLIQQEQ

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495