Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s7897_g18360
Locus habu1_scaffold7897 : 303129 ... 439455 : -
To GenomeBrowser habu1_scaffold7897:303129..439455
Genes list of scaffold habu1_scaffold7897

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s7897_g18360.t1 gi|602648505|ref|XP_007430669.1| PREDICTED: keratinocyte-associated transmembrane protein 2 [Python bivittatus] 0.0
habu1_s7897_g18360.t1 gi|591357176|ref|XP_007053663.1| PREDICTED: keratinocyte-associated transmembrane protein 2 [Chelonia mydas] 1.99965e-42
habu1_s7897_g18360.t1 gi|530612714|ref|XP_005297939.1| PREDICTED: keratinocyte-associated transmembrane protein 2 [Chrysemys picta bellii] 9.99995e-41
habu1_s7897_g18360.t1 gi|697433808|ref|XP_009677498.1| PREDICTED: keratinocyte-associated transmembrane protein 2 [Struthio camelus australis] 2.0e-40
habu1_s7897_g18360.t1 gi|719794282|ref|XP_010224440.1| PREDICTED: keratinocyte-associated transmembrane protein 2-like, partial [Tinamus guttatus] 1.0e-38

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 5.1
Venom grand-1 3.7
Pit, infrared sensing 4.7
Nose 7.3
Brain-1 3.6
Eye 4.4
fetal fibroblast 10.1
venom gland-2 11.0
Brain-2 3.7
Spleen 3.1
Lung 3.5
Liver 5.8
Kidney 4.6
Pancreas 8.6
Small intestine 2.9
Large intestine 3.6
Stomach 3.6
heart 3.5
ovary 6.8
cheek muscle 2.8

Transcript
Transcript IDhabu1_s7897_g18360.t1
Definition-
>habu1_s7897_g18360.t1
gaggccacgtcccccggcgacggtatggcggcagccatggcggccaccgagcggagagcgaagtgtaccgcgatggggga
ggcgccgtcactgtcgtccttggcgcgaacgtcgctttttcttttgctcctggcctttccgcttcgggcccagcttccag
acgatactacacctaaagcagaaatacctcagaacgctaagtcaattcataaggatgaaaaccagaatttatcctcagtt
atgtctgcaaccacagaagataaagtagtccagcctcctgtgtcaccttcagaaactgttagccttaatcaacaaaatat
tgatgtttcagaagatgcagatagcaaagaatatgacatgacagacagaaatatatttactagttccctaccaacagcaa
aagaacctaaagattatgtcatctatgatgcagcttctaactctcagaataatcaagatgaccaagatgtgtcagaattt
gcagaagattcagggatgggaaacttcgagaataaaaaatcatttgctcataacatgaaggacactacagtctcaggatt
ggaagatgacagtcatttcttttttcaccttgttatttttgcctttttggttgctatagtttatatcacatatcacaata
agagaaagataattttgttggttcagaatagaagatggcgagatggtctgtgttccagaacagttggatatcaacgttta
gatcaaaatgtttatggcaggggtccccaacccccaatctgtggactggcaccaggccgtggcatgccagaaaccagtcc
gcgcaagcaaagccccatccatgggatgcaggcagtatatgaaaccacgtcctctgtggtctgcagaaaaaccttcacgg
aaccggtccctggtgtcaaaagccctcttagcactagtcccatgatgaaaggaggtgatcagtgcatctttgagcacatc
acacaatatgtccttgcatgtttaagtgagaaggccttcataatctacatggcttgctgtatctgcataaattttccttt
ggactcaccatgtcttcaaagcccacagacaaatgagcagatactatcaggagatttcatgtcaaagcatgatgaatagg
aaagacttggctgatgtactttgaacttgctcaagtggacctcctggccataaatgtggaacacctgaagagagaaaatt
tgatagacttatttattttaaagaagaaatgcacaaagcaggggagaccattgcttctcaggtcttccacaaaacaatag
gataaaaataaacttcagccacacatgaaagggt

Protein
Protein IDhabu1_s7897_g18360.t1
Definition-
>habu1_s7897_g18360.t1
MAAAMAATERRAKCTAMGEAPSLSSLARTSLFLLLLAFPLRAQLPDDTTPKAEIPQNAKSIHKDENQNLSSVMSATTEDK
VVQPPVSPSETVSLNQQNIDVSEDADSKEYDMTDRNIFTSSLPTAKEPKDYVIYDAASNSQNNQDDQDVSEFAEDSGMGN
FENKKSFAHNMKDTTVSGLEDDSHFFFHLVIFAFLVAIVYITYHNKRKIILLVQNRRWRDGLCSRTVGYQRLDQNVYGRG
PQPPICGLAPGRGMPETSPRKQSPIHGMQAVYETTSSVVCRKTFTEPVPGVKSPLSTSPMMKGGDQCIFEHITQYVLACL
SEKAFIIYMACCICINFPLDSPCLQSPQTNEQILSGDFMSKHDE

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