Gene
| Gene Model ID | habu1_s7897_g18364 |
|---|---|
| Locus | habu1_scaffold7897 : 706132 ... 730199 : - |
| To GenomeBrowser | habu1_scaffold7897:706132..730199 |
| Genes list of scaffold | habu1_scaffold7897 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein phosphatase 2a catalytic subunit alpha isoform | EC:3.1.3.16 GO:0000159 GO:0000775 GO:0000922 GO:0004721 GO:0005634 GO:0005829 GO:0005886 GO:0006470 GO:0007165 GO:0007498 GO:0008022 GO:0008637 GO:0010468 GO:0010719 GO:0034976 GO:0042542 GO:0043161 GO:0046677 GO:0046872 GO:0046982 GO:0050811 GO:0070062 GO:0071902 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7897_g18364.t1 | 1 | 1 | Metallophos | 41 | 233 | 2.70002e-41 | 141.1 | 2.8026e-45 | 3.50002e-41 | 140.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7897_g18364.t1 | gi|723150348|ref|XP_010292596.1| | PREDICTED: serine/threonine-protein phosphatase 2A catalytic subunit beta isoform [Phaethon lepturus] | 0.0 |
| habu1_s7897_g18364.t1 | gi|698449794|ref|XP_009700571.1| | PREDICTED: serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like [Cariama cristata] | 0.0 |
| habu1_s7897_g18364.t1 | gi|701330033|ref|XP_009977440.1| | PREDICTED: serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like [Tauraco erythrolophus] | 0.0 |
| habu1_s7897_g18364.t1 | gi|57525024|ref|NP_001006152.1| | serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [Gallus gallus] | 0.0 |
| habu1_s7897_g18364.t1 | gi|148230509|ref|NP_001080353.1| | protein phosphatase 2, catalytic subunit, alpha isozyme [Xenopus laevis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 48.4 |
| Venom grand-1 | 35.3 |
| Pit, infrared sensing | 35.7 |
| Nose | 50.4 |
| Brain-1 | 65.3 |
| Eye | 32.3 |
| fetal fibroblast | 102.8 |
| venom gland-2 | 86.6 |
| Brain-2 | 75.9 |
| Spleen | 32.2 |
| Lung | 29.8 |
| Liver | 33.6 |
| Kidney | 31.7 |
| Pancreas | 22.5 |
| Small intestine | 26.2 |
| Large intestine | 46.7 |
| Stomach | 31.3 |
| heart | 27.2 |
| ovary | 56.5 |
| cheek muscle | 17.6 |
Transcript
| Transcript ID | habu1_s7897_g18364.t1 |
|---|---|
| Definition | - |
>habu1_s7897_g18364.t1 ggctccgctgagatgtgagaagcgggtgcgggccaggagggcgctgagacgagcgcggacttgagagccaccgcaagggg cgccgtcccgccgggatgaaaggagaagcggcggcggcggaagcggagtacatctacccggggaaggcagagcggggtgt gtccccggctaaagaaatcttaacaaaagaatccaatgttcaagaagtaagatgtccagtaacagtttgtggagatgtcc atggacaatttcacgatctcatggaacttttcagaattggaggcaaatcaccagacacaaattatttgtttatgggggac tacgttgataggggatactactctgttgaaacagtaacacttctggtagcgcttaaggtccgttaccgtgaacgcatcac aatccttcgagggaaccatgaaagcaggcagatcacccaagtgtatggtttctatgatgagtgtttaaggaaatacggaa atgcaaatgtctggaaatacttcacagatctttttgattatcttcctcttactgctttggtggatggacagattttctgt ctacatggaggtctctctccatctatagatacactggatcatattagagcactggatcgtctccaagaagttccacatga gggtccaatgtgtgatttgctgtggtcagatcctgatgaccggggtggctggggtatttctcctcgaggagctggctata cttttggacaagacatttcagaaactttcaaccatgctaatggtcttacattggtttcaagggctcatcagctggtaatg gagggatacaactggtgtcatgatcggaatgtagtaacaatttttagtgctccaaattattgttaccgttgtggtaacca agctgcaattatggagcttgatgatactctaaaatactcatttttacagtttgatccagcaccacgcagaggtgaaccac atgttactcgtcgcaccccagactactttctgtaatgagattttccacttgtacagtattgccatgaaccatgtgttgac ctaaaggaacatgggaagagcaacagtaactccaaagtgtcagaaaacatttaacattgaaacctgttttcacatggacc aaaagatgtgccatattgaaattcaaagcctcttgtctgtcagcgactgtgaccactttagaatgaaccagttcattgca tgcttgaagcaacattgttggtcaagaaatcagtttctggcatagttctacttgtagttacttttgctttctctgagaga ctgcaaatattaatacgtagacatttaaacacttcgtgaattacaagtaactttccatttagctttagctttccagcatg attgtagataagaatagcaaactatcattgaagcttaatgaacattttaaataagcaccaagactgacttttcttatttg tgttcttattttgttttttagggaaacagtttaatttaattgtcttattgtttcatctgaactctgttcccacctcattt ttctctcacacttttcctctacaaagtgtcccatgtatgtgttcatcatagtgaattactttgaaagaacaatttatttc tgtaagacgttgctgctggagagtgttgcagcatttttcataataaacttgtgaactaagtttgaaaga |
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Protein
| Protein ID | habu1_s7897_g18364.t1 |
|---|---|
| Definition | - |
>habu1_s7897_g18364.t1 MKGEAAAAEAEYIYPGKAERGVSPAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRG YYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGL SPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNW CHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPDYFL |
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