Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s7897_g18367
Locus habu1_scaffold7897 : 930204 ... 1094748 : +
To GenomeBrowser habu1_scaffold7897:930204..1094748
Genes list of scaffold habu1_scaffold7897

Annotation by Blast2GO
Annotation GO
protein jade-2 isoform x1 GO:0000123 GO:0008270 GO:0043966 GO:0043981 GO:0043982 GO:0043983 GO:0060395 GO:0070062

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s7897_g18367.t2 1 1 EPL1 39 216 1.2e-14 54.8 4.9e-18 1.2e-14 54.8
habu1_s7897_g18367.t2 1 1 PHD 241 287 2.7e-09 36.5 1.1e-12 2.7e-09 36.5
habu1_s7897_g18367.t2 1 1 PHD_2 254 287 3.1e-12 45.5 1.3e-15 3.1e-12 45.5
habu1_s7897_g18367.t2 1 1 zf-HC5HC2H_2 293 404 4.1e-30 104.0 1.6e-33 4.1e-30 104.0
habu1_s7897_g18367.t2 1 1 zf-HC5HC2H 315 405 1.1e-22 79.9 4.3e-26 1.1e-22 79.9

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 3.3
Venom grand-1 1.9
Pit, infrared sensing 2.1
Nose 0.9
Brain-1 13.2
Eye 2.0
fetal fibroblast 2.3
venom gland-2 1.3
Brain-2 12.4
Spleen 5.3
Lung 1.6
Liver 2.9
Kidney 3.8
Pancreas 6.3
Small intestine 4.3
Large intestine 2.9
Stomach 3.6
heart 6.3
ovary 1.3
cheek muscle 13.2

Transcript
Transcript IDhabu1_s7897_g18367.t1
Definition-
>habu1_s7897_g18367.t1
ggtcgtggcattaaaaaggttgagaaccactgacctagagtttggattccaagcaaattaccaagaggctaattacttgt
cctagtcctcattttcccttcccatttttatatgaatacaactgcttcaaaataaaaccatttccatccgcgttttatac
tttggtttcatgccattggtccatgccattgtaattttatcctcagaggcttttcaaagggattctcccaaactcttaat
tcattggattgttgaacttgaataagaagttgcaagatagccttttacttgcattatttctttggacttaccaagtaaat
tccttagtggagaatccttaaatttggatggaagagaaacggcgaaaatactcgatcagcagtgataactcagacaccac
tgacagtcaaacaacatcaacttcaaaatgctccaaaattccaagtacaaaatctagttggtcaaggcaaaaggagaaga
aaccctcagaggtttttcgcaccgacttgataacagcaatgaagattccagattctttccagctgagcccagatgagtac
tatatccttgctgatccctggagacaagagtgggagaagggtgttcaagtgccagcaaatacagaaacaatcccagaacc
agaggttaggataatacctctgctagatcattcttcatcacagacttttccaaggaacctgtccagctctgaatgttcag
atgcttccagaacatattcccagagagtatgtcgctatgatctagatgaaattgatgcatgctggttggaacttttcaac
atggagctcaaagaaatggaaaagccagaaatggatgaattcaccttggaaagagtgcttgaggaattggagactctgtg
ctctgagaatatgaatattgccattgagacagaagaaggccttgggatagagtacgatgaggatgtggtatgtgatgtgt
gccgttcaccagaaggagaagatggcaatgagatggttttctgtgacaaatgcaatgtctgtgtgcatcaggcttgttat
ggaatcctaaaagttccccttggaaactggctctgtcggacctgtgccctgggagttcagccaaagtgtttactctgtcc
aaagagagggggagccttgaaacctacccggagtggaacaaaatgggttcatgttagctgtgccttatggattcccgaag
ttagcattggatgccctgaaaaaatggaaccgattacaaaaatttcacatatcccagcaagcagatgggctctgtcgtgc
agtctttgcaaggagtgcactggaacctgtattcaatgttccatgccttcctgcatcacagccttccatgtaacatgtgc
ctttgagcacaatttggacatgcggacactgttagcagaaaatgatgaggtaaagttcaagtcattttgtattgagcaca
gcactggtgctaccaagccaccagatgaggcacggatggaggcagatcaaggtaaactagacatggaaaaggtaacactg
agaaaacagaagctccagcagttggaagaggacttctatgatcttgtgaaaccttctgaagtggctgagaaccttgattt
gactgagtggctagttgattttgtctatcagtactggaagatgaagagaaaagccaattataacaagccactactgatgc
ccaagacagacgaagtggataatttggctcagcaagagcaggatgtattgtaccggcgtttgaagctgttcacacacctt
agacaggatcttgaaagggttagaaatctttgttatatggtaacaaaacgagagaaaatgaagcactccatttgcaaact
ccaggaacagattttccatctccagatgaaacttattgagaaagatctttatgcagagcaagctgagaagagaacaaaag
gaaggagaagtgatccaaaaagaaaaggaagagatgatagaaaaagcagtcctgagaagaaagaaaagagaaaatcaggg
aatgagttagtactgggacagctaggcttgtcaacttcctttcccattgctgggaccttcttcaatagctggttggctca
atctgtacagatcaccacagagaacatggcaatgagtgagtggtccttgaacaacggccatcgtgaaaatacaactccag
gcctttctgaggaacttttacaagatgaagagaccttactaagttttatgatggatcattccttgaagtccccattgaaa
cagagtgatacaaccaagaaaactaaaagtaaaaatcgaacacacactaagaaaaaaacagcaagaaatggcttaaatgc
cctctttaaaagacatcaagaaggggattcaaataaatggactaacagcagttatttggcaaataacaccacaaaatctt
tatcccatgatttaagaaacggcaaggcagagaaaagtatggacaagctacagtcagaacgtaaaggggtatgtgaagtg
aaaaagtcgtctaagaagggctcttctcatccagcacttcctcttccaaaagcaaatgattctcaagcatccccgagtct
cataaataacctaaacaatgatgaggatgtcatgaaatacaccccaactgatcctaactctctggttcaagtgcctgatt
cagtaggtagtctgaaaacagtggtgaggttcaaattaccgaaagaaggcaaagggactcaaagaccacagaacaagacg
cccgaattgcttcatggacctccagaaaatgaaagatcaaaggttattttgcatccttttgacaatgagactgatggcta
cttttcagatgcagaaatgagtgactctgacacagaatctggaagtggcagagggcaccacagccagttagattcaggaa
atgaggataatttcagaatgagtattttagcatcttaatgcacctttgagaccagtcatgacagctttgtgaggcttaaa
tccagttaacaactgccatgtccaatttcaactggtatcataacaaaggattttggtttgttactttgtttttaatttgt
atatataattcagaaatgagcactgttgtttcctctctctatacgcttgagaaacagctccaggcttcaccaatttagac
tcctatacagtcacagtagttaggctttgtcacatgtatatcttggttacatagaatgcaagcatacacattattaagga
catccgttttctgggagcaagcaggacatctcaggattttaatgaggagatctgagattgccagcgcctgttgttcatgc
agggacgacagttttatgggcattacttaagcaaattgatttcatgatctgccagatgttacagtctctttcggggcagg
tttcagaaggagattactactatggaagccaacatagaacatggaatagtaaaaatagatgttcataggtatgtg
Transcript IDhabu1_s7897_g18367.t2
Definition-
>habu1_s7897_g18367.t2
ggtcgtggcattaaaaaggttgagaaccactgacctagagtttggattccaagcaaattaccaagaggctaattacttgt
cctagtcctcattttcccttcccatttttatatgaatacaactgcttcaaaataaaaccatttccatccgcgttttatac
tttggtttcatgccattggtccatgccattgtaattttatcctcagaggcttttcaaagggattctcccaaactcttaat
tcattggattgttgaacttgaataagaagttgcaagatagccttttacttgcattatttctttggacttaccaagtaaat
tccttagtggagaatccttaaatttggatggaagagaaacggcgaaaatactcgatcagcagtgataactcagacaccac
tgacagtcaaacaacatcaacttcaaaatgctccaaaattccaagtacaaaatctagttggtcaaggcaaaaggagaaga
aaccctcagaggtttttcgcaccgacttgataacagcaatgaagattccagattctttccagctgagcccagatgagtac
tatatccttgctgatccctggagacaagagtgggagaagggtgttcaagtgccagcaaatacagaaacaatcccagaacc
agaggttaggaggattcctatttttatctccagatttcaggacggtgcaaaattccaccaatcaaatataaccacaatga
agccacagcccatggtgtcacctcctgccaatgcagaagtaaaactcatgataatacctctgctagatcattcttcatca
cagacttttccaaggaacctgtccagctctgaatgttcagatgcttccagaacatattcccagagagtatgtcgctatga
tctagatgaaattgatgcatgctggttggaacttttcaacatggagctcaaagaaatggaaaagccagaaatggatgaat
tcaccttggaaagagtgcttgaggaattggagactctgtgctctgagaatatgaatattgccattgagacagaagaaggc
cttgggatagagtacgatgaggatgtggtatgtgatgtgtgccgttcaccagaaggagaagatggcaatgagatggtttt
ctgtgacaaatgcaatgtctgtgtgcatcaggcttgttatggaatcctaaaagttccccttggaaactggctctgtcgga
cctgtgccctgggagttcagccaaagtgtttactctgtccaaagagagggggagccttgaaacctacccggagtggaaca
aaatgggttcatgttagctgtgccttatggattcccgaagttagcattggatgccctgaaaaaatggaaccgattacaaa
aatttcacatatcccagcaagcagatgggctctgtcgtgcagtctttgcaaggagtgcactggaacctgtattcaatgtt
ccatgccttcctgcatcacagccttccatgtaacatgtgcctttgagcacaatttggacatgcggacactgttagcagaa
aatgatgaggtaaagttcaagtcattttgtattgagcacagcactggtgctaccaagccaccagatgaggcacggatgga
ggcagatcaaggtaaactagacatggaaaaggtaacactgagaaaacagaagctccagcagttggaagaggacttctatg
atcttgtgaaaccttctgaagtggctgagaaccttgatttgactgagtggctagttgattttgtctatcagtactggaag
atgaagagaaaagccaattataacaagccactactgatgcccaagacagacgaagtggataatttggctcagcaagagca
ggatgtattgtaccggcgtttgaagctgttcacacaccttagacaggatcttgaaagggttagaaatctttgttatatgg
taacaaaacgagagaaaatgaagcactccatttgcaaactccaggaacagattttccatctccagatgaaacttattgag
aaagatctttatgcagagcaagctgagaagagaacaaaaggaaggagaagtgatccaaaaagaaaaggaagagatgatag
aaaaagcagtcctgagaagaaagaaaagagaaaatcagggaatgagttagtactgggacagctaggcttgtcaacttcct
ttcccattgctgggaccttcttcaatagctggttggctcaatctgtacagatcaccacagagaacatggcaatgagtgag
tggtccttgaacaacggccatcgtgaaaatacaactccaggcctttctgaggaacttttacaagatgaagagaccttact
aagttttatgatggatcattccttgaagtccccattgaaacagagtgatacaaccaagaaaactaaaagtaaaaatcgaa
cacacactaagaaaaaaacagcaagaaatggcttaaatgccctctttaaaagacatcaagaaggggattcaaataaatgg
actaacagcagttatttggcaaataacaccacaaaatctttatcccatgatttaagaaacggcaaggcagagaaaagtat
ggacaagctacagtcagaacgtaaaggggtatgtgaagtgaaaaagtcgtctaagaagggctcttctcatccagcacttc
ctcttccaaaagcaaatgattctcaagcatccccgagtctcataaataacctaaacaatgatgaggatgtcatgaaatac
accccaactgatcctaactctctggttcaagtgcctgattcagtaggtagtctgaaaacagtggtgaggttcaaattacc
gaaagaaggcaaagggactcaaagaccacagaacaagacgcccgaattgcttcatggacctccagaaaatgaaagatcaa
aggttattttgcatccttttgacaatgagactgatggctacttttcagatgcagaaatgagtgactctgacacagaatct
ggaagtggcagagggcaccacagccagttagattcaggaaatgaggataatttcagaatgagtattttagcatcttaatg
cacctttgagaccagtcatgacagctttgtgaggcttaaatccagttaacaactgccatgtccaatttcaactggtatca
taacaaaggattttggtttgttactttgtttttaatttgtatatataattcagaaatgagcactgttgtttcctctctct
atacgcttgagaaacagctccaggcttcaccaatttagactcctatacagtcacagtagttaggctttgtcacatgtata
tcttggttacatagaatgcaagcatacacattattaaggacatccgttttctgggagcaagcaggacatctcaggatttt
aatgaggagatctgagattgccagcgcctgttgttcatgcagggacgacagttttatgggcattacttaagcaaattgat
ttcatgatctgccagatgttacagtctctttcggggcaggtttcagaaggagattactactatggaagccaacatagaac
atggaatagtaaaaatagatgttcataggtatgtg

Protein
Protein IDhabu1_s7897_g18367.t1
Definition-
>habu1_s7897_g18367.t1
MEEKRRKYSISSDNSDTTDSQTTSTSKCSKIPSTKSSWSRQKEKKPSEVFRTDLITAMKIPDSFQLSPDEYYILADPWRQ
EWEKGVQVPANTETIPEPEVRIIPLLDHSSSQTFPRNLSSSECSDASRTYSQRVCRYDLDEIDACWLELFNMELKEMEKP
EMDEFTLERVLEELETLCSENMNIAIETEEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILKVPLGN
WLCRTCALGVQPKCLLCPKRGGALKPTRSGTKWVHVSCALWIPEVSIGCPEKMEPITKISHIPASRWALSCSLCKECTGT
CIQCSMPSCITAFHVTCAFEHNLDMRTLLAENDEVKFKSFCIEHSTGATKPPDEARMEADQGKLDMEKVTLRKQKLQQLE
EDFYDLVKPSEVAENLDLTEWLVDFVYQYWKMKRKANYNKPLLMPKTDEVDNLAQQEQDVLYRRLKLFTHLRQDLERVRN
LCYMVTKREKMKHSICKLQEQIFHLQMKLIEKDLYAEQAEKRTKGRRSDPKRKGRDDRKSSPEKKEKRKSGNELVLGQLG
LSTSFPIAGTFFNSWLAQSVQITTENMAMSEWSLNNGHRENTTPGLSEELLQDEETLLSFMMDHSLKSPLKQSDTTKKTK
SKNRTHTKKKTARNGLNALFKRHQEGDSNKWTNSSYLANNTTKSLSHDLRNGKAEKSMDKLQSERKGVCEVKKSSKKGSS
HPALPLPKANDSQASPSLINNLNNDEDVMKYTPTDPNSLVQVPDSVGSLKTVVRFKLPKEGKGTQRPQNKTPELLHGPPE
NERSKVILHPFDNETDGYFSDAEMSDSDTESGSGRGHHSQLDSGNEDNFRMSILAS
Protein IDhabu1_s7897_g18367.t2
Definition-
>habu1_s7897_g18367.t2
MEEKRRKYSISSDNSDTTDSQTTSTSKCSKIPSTKSSWSRQKEKKPSEVFRTDLITAMKIPDSFQLSPDEYYILADPWRQ
EWEKGVQVPANTETIPEPEVRRIPIFISRFQDGAKFHQSNITTMKPQPMVSPPANAEVKLMIIPLLDHSSSQTFPRNLSS
SECSDASRTYSQRVCRYDLDEIDACWLELFNMELKEMEKPEMDEFTLERVLEELETLCSENMNIAIETEEGLGIEYDEDV
VCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILKVPLGNWLCRTCALGVQPKCLLCPKRGGALKPTRSGTKWVHVSCAL
WIPEVSIGCPEKMEPITKISHIPASRWALSCSLCKECTGTCIQCSMPSCITAFHVTCAFEHNLDMRTLLAENDEVKFKSF
CIEHSTGATKPPDEARMEADQGKLDMEKVTLRKQKLQQLEEDFYDLVKPSEVAENLDLTEWLVDFVYQYWKMKRKANYNK
PLLMPKTDEVDNLAQQEQDVLYRRLKLFTHLRQDLERVRNLCYMVTKREKMKHSICKLQEQIFHLQMKLIEKDLYAEQAE
KRTKGRRSDPKRKGRDDRKSSPEKKEKRKSGNELVLGQLGLSTSFPIAGTFFNSWLAQSVQITTENMAMSEWSLNNGHRE
NTTPGLSEELLQDEETLLSFMMDHSLKSPLKQSDTTKKTKSKNRTHTKKKTARNGLNALFKRHQEGDSNKWTNSSYLANN
TTKSLSHDLRNGKAEKSMDKLQSERKGVCEVKKSSKKGSSHPALPLPKANDSQASPSLINNLNNDEDVMKYTPTDPNSLV
QVPDSVGSLKTVVRFKLPKEGKGTQRPQNKTPELLHGPPENERSKVILHPFDNETDGYFSDAEMSDSDTESGSGRGHHSQ
LDSGNEDNFRMSILAS

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