Gene
| Gene Model ID | habu1_s7897_g18369 |
|---|---|
| Locus | habu1_scaffold7897 : 1155727 ... 1177443 : - |
| To GenomeBrowser | habu1_scaffold7897:1155727..1177443 |
| Genes list of scaffold | habu1_scaffold7897 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gtp-binding protein sar1b | GO:0005525 GO:0005789 GO:0006886 GO:0016192 GO:0032580 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7897_g18369.t1 | 1 | 1 | Arf | 12 | 197 | 0.0 | 212.9 | 0.0 | 0.0 | 212.7 |
| habu1_s7897_g18369.t1 | 1 | 1 | SRPRB | 26 | 148 | 1.4e-08 | 34.1 | 1.1e-11 | 1.8e-08 | 33.8 |
| habu1_s7897_g18369.t1 | 1 | 1 | Miro | 27 | 137 | 2.2e-07 | 31.3 | 2.0e-10 | 3.2e-07 | 30.8 |
| habu1_s7897_g18369.t1 | 1 | 1 | Ras | 27 | 148 | 3.3e-07 | 29.8 | 2.3e-10 | 3.8e-07 | 29.6 |
| habu1_s7897_g18369.t1 | 1 | 1 | MMR_HSR1 | 28 | 135 | 8.8e-06 | 25.6 | 7.7e-09 | 1.3e-05 | 25.1 |
| habu1_s7897_g18369.t1 | 1 | 1 | G-alpha | 64 | 138 | 6.1e-10 | 38.3 | 2.1e-10 | 3.5e-07 | 29.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7897_g18369.t1 | gi|602630050|ref|XP_007421944.1| | PREDICTED: GTP-binding protein SAR1b [Python bivittatus] | 0.0 |
| habu1_s7897_g18369.t1 | gi|558130000|ref|XP_006116113.1| | PREDICTED: GTP-binding protein SAR1b [Pelodiscus sinensis] | 0.0 |
| habu1_s7897_g18369.t1 | gi|530645694|ref|XP_005309504.1| | PREDICTED: GTP-binding protein SAR1b [Chrysemys picta bellii] | 0.0 |
| habu1_s7897_g18369.t1 | gi|73971260|ref|XP_538630.2| | PREDICTED: GTP-binding protein SAR1b [Canis lupus familiaris] | 0.0 |
| habu1_s7897_g18369.t1 | gi|78369468|ref|NP_001030392.1| | GTP-binding protein SAR1b [Bos taurus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 22.7 |
| Venom grand-1 | 137.8 |
| Pit, infrared sensing | 36.4 |
| Nose | 44.2 |
| Brain-1 | 15.4 |
| Eye | 25.4 |
| fetal fibroblast | 26.6 |
| venom gland-2 | 55.3 |
| Brain-2 | 19.2 |
| Spleen | 8.1 |
| Lung | 10.8 |
| Liver | 110.3 |
| Kidney | 52.9 |
| Pancreas | 6.3 |
| Small intestine | 16.1 |
| Large intestine | 13.7 |
| Stomach | 13.8 |
| heart | 24.5 |
| ovary | 21.4 |
| cheek muscle | 718.8 |
Transcript
| Transcript ID | habu1_s7897_g18369.t1 |
|---|---|
| Definition | - |
>habu1_s7897_g18369.t1 gttcgctcacacggcccggaaggaaggaaggagtcgtggaggggcggagcggaggagagacagagcagagaagaggggag gcctccaggctgctgtgtcggtagttgtggatgaagggtgcgaatctcaggctccacacagcggatccaataagattttg aaatgtcctttatatttgactggatttacagcggcttcagtagtgtactgcaatttttaggattatataagaaaacaggt aaactagtattccttggattggataatgctggaaaaactactctcttgcacatgcttaaagatgacagactgggacaaca tgtccccacattacatcccacttcggaagagctgacaattgctggtatgacgtttacaacttttgatctaggaggacatg ctcaagctcgcagggtttggaaaaactatctgcctgccatcaacggcattgtctttctagtggactgtgcggatcatgaa agattggctgaatctaagcaagaacttgatgcattaatgacagatgaaactattgctaacgtgcctatcctaattcttgg caacaagattgacagaccagaagccatcagtgaagagaggttacgagaaatgtttggtttgtatggccagacaacaggaa agggaaatgtctcagtgaaggaattgaacactcggcccttagaagttttcatgtgcagtgtgttaaagagacaaggttat ggggaaggatttcgctggatggcacagtacattgattaatgccaaattcacattactacacactatccaaacctgttcat gttctgatcaatcagtgtacataacttgaacttaacagactttggttacaaaagcgtttttttttattgtatcaattgtg t |
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Protein
| Protein ID | habu1_s7897_g18369.t1 |
|---|---|
| Definition | - |
>habu1_s7897_g18369.t1 MSFIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHA QARRVWKNYLPAINGIVFLVDCADHERLAESKQELDALMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGK GNVSVKELNTRPLEVFMCSVLKRQGYGEGFRWMAQYID |
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