Gene
| Gene Model ID | habu1_s7897_g18374 |
|---|---|
| Locus | habu1_scaffold7897 : 1309986 ... 1314793 : + |
| To GenomeBrowser | habu1_scaffold7897:1309986..1314793 |
| Genes list of scaffold | habu1_scaffold7897 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| thioredoxin domain-containing protein 15 | GO:0045454 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7897_g18374.t1 | 1 | 1 | Thioredoxin | 194 | 279 | 1.1e-09 | 37.9 | 1.3e-13 | 1.9e-09 | 37.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7897_g18374.t1 | gi|602649716|ref|XP_007431259.1| | PREDICTED: thioredoxin domain-containing protein 15 [Python bivittatus] | 0.0 |
| habu1_s7897_g18374.t1 | gi|637326092|ref|XP_003223995.2| | PREDICTED: thioredoxin domain-containing protein 15 [Anolis carolinensis] | 0.0 |
| habu1_s7897_g18374.t1 | gi|543360304|ref|XP_005523802.1| | PREDICTED: thioredoxin domain-containing protein 15 [Pseudopodoces humilis] | 0.0 |
| habu1_s7897_g18374.t1 | gi|591357121|ref|XP_007053636.1| | PREDICTED: thioredoxin domain-containing protein 15 [Chelonia mydas] | 0.0 |
| habu1_s7897_g18374.t1 | gi|611972879|ref|XP_007473432.1| | PREDICTED: thioredoxin domain-containing protein 15 isoform X3 [Monodelphis domestica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 23.2 |
| Venom grand-1 | 49.4 |
| Pit, infrared sensing | 26.0 |
| Nose | 35.3 |
| Brain-1 | 14.6 |
| Eye | 26.5 |
| fetal fibroblast | 33.2 |
| venom gland-2 | 81.9 |
| Brain-2 | 18.1 |
| Spleen | 29.3 |
| Lung | 21.0 |
| Liver | 83.3 |
| Kidney | 50.2 |
| Pancreas | 72.2 |
| Small intestine | 41.1 |
| Large intestine | 22.8 |
| Stomach | 44.6 |
| heart | 30.6 |
| ovary | 77.0 |
| cheek muscle | 67.4 |
Transcript
| Transcript ID | habu1_s7897_g18374.t1 |
|---|---|
| Definition | - |
>habu1_s7897_g18374.t1 ggccggtccccctcccttgcgaggaggatgctcttgtcctcgcgcgggtgggggcggcacctcggcgtggtctggctgct cgcgttccttgtggcagcagaaacagatgaaacctctgacctgctgtcaaaagggttaagtgaaacttccctaccattaa atcaggaaagcagttctgcccattcaagcagcgatggacatagagaatcggtacagtacaggactgcagaaattgctgat gctatgatgagtggtagccttcttgccgaccatcatgtcgtattgtcagttattccaagtgacacaaaggagtcacatct ctctgaagcagacactggtacttgtgatgcagcagcagatggtgaatgcagtacgaataacatggcatctgtatctcaac aagtgtcgcatgcacaagagccagtagtacatccaccagtagtgttggaagcagtgcatccttcatcagcagaggactca aataacacagatggtacgaaaaccccaaaagtgaactgtgaagaaagaaacattacaggaatgacaaatttcacattaca aattttgaatatttcccaagatttaatggaatttttaaatccaaatggcagtgactgcaccttggtcttattttataccc cttggtgtcgtttttcagccaatttggctcctcattttaattgtctgccacgagtgttcccaacactacatttcttggcc ttggatgcctcccaacatagcagtttatcaactcgatttggaactgtggctgttcctaacatcctcctttttcaaggggc taagccaatggcaagatttaaccatacagatcgaactctggaaacactgaaagcattcattgttaatcagactggaatac aacctaagtctgatgtgatggtgagcatggaagaccatgttggtcccctgcctagcacactgagtaaaggaatagattgg ctcctcttattttctttattgtttcttatcagtttcatcatgtatgctactattcggacagagagcatccgttggttaat acctggtcaagatcaggagcatcaggagtgatatgtgatttgaggactatctgctttcagaataagttgataaacttgtg aattcttcatgtcttg |
|
Protein
| Protein ID | habu1_s7897_g18374.t1 |
|---|---|
| Definition | - |
>habu1_s7897_g18374.t1 MLLSSRGWGRHLGVVWLLAFLVAAETDETSDLLSKGLSETSLPLNQESSSAHSSSDGHRESVQYRTAEIADAMMSGSLLA DHHVVLSVIPSDTKESHLSEADTGTCDAAADGECSTNNMASVSQQVSHAQEPVVHPPVVLEAVHPSSAEDSNNTDGTKTP KVNCEERNITGMTNFTLQILNISQDLMEFLNPNGSDCTLVLFYTPWCRFSANLAPHFNCLPRVFPTLHFLALDASQHSSL STRFGTVAVPNILLFQGAKPMARFNHTDRTLETLKAFIVNQTGIQPKSDVMVSMEDHVGPLPSTLSKGIDWLLLFSLLFL ISFIMYATIRTESIRWLIPGQDQEHQE |
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