Gene
| Gene Model ID | habu1_s7897_g18381 |
|---|---|
| Locus | habu1_scaffold7897 : 1675208 ... 1706455 : - |
| To GenomeBrowser | habu1_scaffold7897:1675208..1706455 |
| Genes list of scaffold | habu1_scaffold7897 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7897_g18381.t1 | 1 | 1 | Histone | 15 | 88 | 1.3e-22 | 79.7 | 1.6e-25 | 3.9e-22 | 78.1 |
| habu1_s7897_g18381.t1 | 1 | 1 | Macro | 212 | 325 | 1.0e-29 | 102.8 | 9.1e-33 | 2.2e-29 | 101.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7897_g18381.t1 | gi|602633542|ref|XP_007423649.1| | PREDICTED: core histone macro-H2A.1-like isoform X2 [Python bivittatus] | 0.0 |
| habu1_s7897_g18381.t1 | gi|697502234|ref|XP_009679939.1| | PREDICTED: core histone macro-H2A.1 isoform X4 [Struthio camelus australis] | 0.0 |
| habu1_s7897_g18381.t1 | gi|637326123|ref|XP_008113727.1| | PREDICTED: core histone macro-H2A.1 isoform X3 [Anolis carolinensis] | 0.0 |
| habu1_s7897_g18381.t1 | gi|677869902|ref|XP_009068209.1| | PREDICTED: core histone macro-H2A.1 isoform X6 [Acanthisitta chloris] | 0.0 |
| habu1_s7897_g18381.t1 | gi|591357131|ref|XP_007053641.1| | PREDICTED: core histone macro-H2A.1-like isoform X4 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.1 |
| Venom grand-1 | 19.3 |
| Pit, infrared sensing | 10.0 |
| Nose | 13.1 |
| Brain-1 | 7.9 |
| Eye | 8.5 |
| fetal fibroblast | 5.3 |
| venom gland-2 | 19.0 |
| Brain-2 | 9.5 |
| Spleen | 8.6 |
| Lung | 10.1 |
| Liver | 10.4 |
| Kidney | 7.3 |
| Pancreas | 8.5 |
| Small intestine | 7.5 |
| Large intestine | 10.0 |
| Stomach | 7.6 |
| heart | 9.5 |
| ovary | 9.0 |
| cheek muscle | 22.4 |
Transcript
| Transcript ID | habu1_s7897_g18381.t1 |
|---|---|
| Definition | - |
>habu1_s7897_g18381.t1 gaaaacttgggttttcaagattatagtgtatatgcataattcgctgccgttgtttcgaactttataaggggtgcaagaat atatcagaagcattctaggggtgtggggtatagaaaaggttgggagccactgctctagatgtgctgatccagaccccctt gaaaaaaaatgtccagcaggggtggaaagaaaaagtcaaccaaaacatctcgctcagcaaaggctggggtcatattccct gttggacgaatgcttcgttatattaagaaaggtcatccaaaatacagaattggagtcggtgctccagtatatatggcagc agtacttgaatacttgactgcggaaattcttgaattggctggaaatgcagcacgagataacaagaaaggccgtgtcaccc ctagacatatcttgctggctgtagcaaatgacgaagagttaaatcagttgttgaaaggtgtcaccatagccagtggtggt gtattaccaaatattcacccagagttgttggccaaaaagcggggttcaaaaggaaaattggaagctatcatcactccacc cccagctaaaaaagcaaagtcaccatcacagaagaaaaccacaacgaagaaagcaagtgcaaagaaagtagcaagaaagt ctaagaaacagggagaagtcagtaaatcagcaagtgctgacagcacaacagaaggcaccccaacagatggtttcactgtc ttatccaccaaaagtctatttcttgggcaaaagttgcaagttgttcaggctgacattgccacaatcgacagtgatgctgt cgttcacccgacaaattctgacttctacaccggtggtgaagtagggagcacattggagaagcggggtggaaaagaattcc tggaggctgttgttgaacttcgcaaaaagaacgggccattggacacagcaggagctgttgtcagttcaggacatggattg cctgcaaaattcgtgatccactgcaatagtcccagttggggttcagacaaatgtgaggagttgttggaaaagacagtgaa aaactgcttagcactggcagatgaaaagaagctgaagtcaattgcatttccttccattggaagtggcaggaatggtttcc caaagcagactgctgctcagctgatcctgaaagccatttccagctattttgtatcaacaatgtcctcttcaatcaagaca gtctattttgttctctttgatagtgagagtataggaatttatgtgcaagaaatggccaagttagatgccaactaagtcta gaaagcaaacgatacttgcctctttgcccagacccctctccttaaattcctcattgtaaaacagagagccccttatttta aagttcattcatctagggaataaagatgggctttttttttactttt |
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Protein
| Protein ID | habu1_s7897_g18381.t1 |
|---|---|
| Definition | - |
>habu1_s7897_g18381.t1 MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAGNAARDNKKGRVTPRH ILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGSKGKLEAIITPPPAKKAKSPSQKKTTTKKASAKKVARKSKK QGEVSKSASADSTTEGTPTDGFTVLSTKSLFLGQKLQVVQADIATIDSDAVVHPTNSDFYTGGEVGSTLEKRGGKEFLEA VVELRKKNGPLDTAGAVVSSGHGLPAKFVIHCNSPSWGSDKCEELLEKTVKNCLALADEKKLKSIAFPSIGSGRNGFPKQ TAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIGIYVQEMAKLDAN |
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