Gene
| Gene Model ID | habu1_s7897_g18384 |
|---|---|
| Locus | habu1_scaffold7897 : 1890781 ... 1971525 : + |
| To GenomeBrowser | habu1_scaffold7897:1890781..1971525 |
| Genes list of scaffold | habu1_scaffold7897 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| solute carrier family 25 member 48 isoform x1 | GO:0006810 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7897_g18384.t2 | 3 | 1 | Mito_carr | 38 | 158 | 0.0 | 170.7 | 7.9e-20 | 1.2e-15 | 57.0 |
| habu1_s7897_g18384.t2 | 3 | 2 | Mito_carr | 174 | 272 | 0.0 | 170.7 | 3.9e-21 | 5.8e-17 | 61.1 |
| habu1_s7897_g18384.t2 | 3 | 3 | Mito_carr | 282 | 338 | 0.0 | 170.7 | 1.5e-17 | 2.3e-13 | 49.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7897_g18384.t2 | gi|694912492|ref|XP_009447980.1| | PREDICTED: solute carrier family 25 member 48 isoform X5 [Pan troglodytes] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 1.2 |
| Nose | 0.1 |
| Brain-1 | 1.3 |
| Eye | 0.6 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 3.1 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 1.2 |
| Kidney | 21.3 |
| Pancreas | 0.0 |
| Small intestine | 0.3 |
| Large intestine | 0.1 |
| Stomach | 0.0 |
| heart | 0.1 |
| ovary | 0.6 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s7897_g18384.t1 |
|---|---|
| Definition | - |
>habu1_s7897_g18384.t1 ctcgacttacgaccggtttagtcctcgacttatgaccggttggggtcacggcattaaaaaggagatgaatgtaaccgcat cacccaagactaaaactgaacaggagtgcttaagatatggtaaaacgggcagctttcagttggatgattttatagctgga tgggtaggaggagctgcaggtgttgtcgtgggacatcctttggacacagtaaagactcgcttacaagctgggcaaggcta tggaaacacagttaactgtgtccgcactatatacaaaaatgaagctgttactggtttttttaagggaatgtctttccctt taatcagcattgctgcttataattcattggtatttggtgtcttcagcagtacccaaaggtttatttgccaacatcggtat gggatacctaaccatcctcctgcactcacagatataactttagcaagcatggtaactggggctttctcagtaggaattgg ttgcccagttgacctagtaaaaataaggctacagatgcagacacagacttttcctaaggccaacttggaaataaagcaca aagcaactggcgtttcagtacaggctgcctaccgaggtccaattcactgtgtcgctacaattcttcagcaggaaggcctg gcaggactctttcgaggtacgaccgccatgcttctgagggatgtcccaggatactgcctctactttatcccttacgcatt ggtttccgtctggatcacttcagaagaatgtctttctcccactccctttgcagcatggatggctggtggcattgcaggaa tcatatcttggggaacagcaactcctatggatgttgtgaaatgtcgtctccaagcagatggggtttatttaaacaaatac aaaggagtcattgactgtatctatcaaagttacaacagtgaaggtttaaaattgaagtaattgatatttctcatggcata tcatatgtcccaaatatattccagtttccttttttatgatattcataaatcataaattctttggccatttttttgaggta gtgcctcattttgaatataatcaacaatggcatttcaaataatccataaatccaagacttctattctgctgatagcatca gttggcaagaccttgtacaatttatcaatggaattatagtcttaagtcccaaaagttaataaattgacttatttttcaaa acatt |
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| Transcript ID | habu1_s7897_g18384.t2 |
| Definition | - |
>habu1_s7897_g18384.t2 ctcgacttacgaccggtttagtcctcgacttatgaccggttggggtcacggcattaaaaaggagatgaatgtaaccgcat cacccaagactaaaactgaacaggagtgcttaagatatggtaaaacgggcagctttcagttggatgattttatagctgga tgggtaggaggagctgcaggtgttgtcgtgggacatcctttggacacagtaaagactcgcttacaagctgggcaaggcta tggaaacacagttaactgtgtccgcactatatacaaaaatgaagcttggattgccaagagcttgacagtggccttcaaca agaatgtcaaagaatatgatttctggagtactacaaaaagaattacaaaaagaattcagaaagatctgctaacatttcaa gttactggtttttttaagggaatgtctttccctttaatcagcattgctgcttataattcattggtatttggtgtcttcag cagtacccaaaggtttatttgccaacatcggtatgggatacctaaccatcctcctgcactcacagatataactttagcaa gcatggtaactggggctttctcagtaggaattggttgcccagttgacctagtaaaaataaggctacagatgcagacacag acttttcctaaggccaacttggaaataaagcacaaagcaactggcgtttcagtacaggctgcctaccgaggtccaattca ctgtgtcgctacaattcttcagcaggaaggcctggcaggactctttcgaggtacgaccgccatgcttctgagggatgtcc caggatactgcctctactttatcccttacgcattggtttccgtctggatcacttcagaagaatgtctttctcccactccc tttgcagcatggatggctggtggcattgcaggaatcatatcttggggaacagcaactcctatggatgttgtgaaatgtcg tctccaagcagatggggtttatttaaacaaatacaaaggagtcattgactgtatctatcaaagttacaacagtgaaggtt taaaattgaagtaattgatatttctcatggcatatcatatgtcccaaatatattccagtttccttttttatgatattcat aaatcataaattctttggccatttttttgaggtagtgcctcattttgaatataatcaacaatggcatttcaaataatcca taaatccaagacttctattctgctgatagcatcagttggcaagaccttgtacaatttatcaatggaattatagtcttaag tcccaaaagttaataaattgacttatttttcaaaacatt |
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Protein
| Protein ID | habu1_s7897_g18384.t1 |
|---|---|
| Definition | - |
>habu1_s7897_g18384.t1 MTGWGHGIKKEMNVTASPKTKTEQECLRYGKTGSFQLDDFIAGWVGGAAGVVVGHPLDTVKTRLQAGQGYGNTVNCVRTI YKNEAVTGFFKGMSFPLISIAAYNSLVFGVFSSTQRFICQHRYGIPNHPPALTDITLASMVTGAFSVGIGCPVDLVKIRL QMQTQTFPKANLEIKHKATGVSVQAAYRGPIHCVATILQQEGLAGLFRGTTAMLLRDVPGYCLYFIPYALVSVWITSEEC LSPTPFAAWMAGGIAGIISWGTATPMDVVKCRLQADGVYLNKYKGVIDCIYQSYNSEGLKLK |
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| Protein ID | habu1_s7897_g18384.t2 |
| Definition | - |
>habu1_s7897_g18384.t2 MTGWGHGIKKEMNVTASPKTKTEQECLRYGKTGSFQLDDFIAGWVGGAAGVVVGHPLDTVKTRLQAGQGYGNTVNCVRTI YKNEAWIAKSLTVAFNKNVKEYDFWSTTKRITKRIQKDLLTFQVTGFFKGMSFPLISIAAYNSLVFGVFSSTQRFICQHR YGIPNHPPALTDITLASMVTGAFSVGIGCPVDLVKIRLQMQTQTFPKANLEIKHKATGVSVQAAYRGPIHCVATILQQEG LAGLFRGTTAMLLRDVPGYCLYFIPYALVSVWITSEECLSPTPFAAWMAGGIAGIISWGTATPMDVVKCRLQADGVYLNK YKGVIDCIYQSYNSEGLKLK |
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