Gene
| Gene Model ID | habu1_s8317_g18619 |
|---|---|
| Locus | habu1_scaffold8317 : 263856 ... 323918 : + |
| To GenomeBrowser | habu1_scaffold8317:263856..323918 |
| Genes list of scaffold | habu1_scaffold8317 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nucleoprotein tpr | GO:0005515 GO:0005643 GO:0005737 GO:0006405 GO:0006606 GO:0007094 GO:0010033 GO:0010629 GO:0015630 GO:0019219 GO:0034605 GO:0044087 GO:0044430 GO:0044710 GO:0044822 GO:0044877 GO:0046822 GO:0048522 GO:0065003 GO:0071822 GO:0090304 GO:0090316 GO:2000113 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s8317_g18619.t1 | 2 | 1 | TPR_MLP1_2 | 991 | 1121 | 7.7e-29 | 100.1 | 6.5e-31 | 3.2e-27 | 94.8 |
| habu1_s8317_g18619.t1 | 2 | 2 | TPR_MLP1_2 | 1326 | 1456 | 7.7e-29 | 100.1 | 2.9e-08 | 0.00014 | 21.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s8317_g18619.t1 | gi|602662702|ref|XP_007436992.1| | PREDICTED: nucleoprotein TPR [Python bivittatus] | 0.0 |
| habu1_s8317_g18619.t1 | gi|700379361|ref|XP_009929404.1| | PREDICTED: nucleoprotein TPR, partial [Opisthocomus hoazin] | 0.0 |
| habu1_s8317_g18619.t1 | gi|704336635|ref|XP_010173858.1| | PREDICTED: nucleoprotein TPR, partial [Caprimulgus carolinensis] | 0.0 |
| habu1_s8317_g18619.t1 | gi|697477000|ref|XP_009671129.1| | PREDICTED: nucleoprotein TPR [Struthio camelus australis] | 0.0 |
| habu1_s8317_g18619.t1 | gi|700412699|ref|XP_009960495.1| | PREDICTED: nucleoprotein TPR [Leptosomus discolor] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 11.1 |
| Venom grand-1 | 9.6 |
| Pit, infrared sensing | 9.0 |
| Nose | 7.5 |
| Brain-1 | 11.4 |
| Eye | 8.2 |
| fetal fibroblast | 25.7 |
| venom gland-2 | 11.0 |
| Brain-2 | 12.0 |
| Spleen | 11.2 |
| Lung | 10.0 |
| Liver | 9.1 |
| Kidney | 10.3 |
| Pancreas | 13.1 |
| Small intestine | 9.5 |
| Large intestine | 9.6 |
| Stomach | 7.5 |
| heart | 13.2 |
| ovary | 23.7 |
| cheek muscle | 22.9 |
Transcript
| Transcript ID | habu1_s8317_g18619.t1 |
|---|---|
| Definition | - |
>habu1_s8317_g18619.t1 tttcccagccttcctgttctaccctttccgggggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagcggaagtaatcctacacatactgtacttacacagatatctaaact tccttgatcataatgtcagagctgatgtgcatacaattggattctcgcaaacctagaggaggattgtgttctgccaacct gaactttgaggaagaaataggaacaaatttggagaaacagtttagatcaggggtccccaacccttggtccgtggaccagt accgggctgcggcatgccagcaaccggtccgcacaaacaagcaaagccccatccgtgggatgcaggcacgtaaccagtcc ctggtgcccaaaagggataatacagtactgaagtatattaatggatgttttacagagcaacaatattttgaagtagaaaa acgattggctcagagtcaggagaggcttgttaatgaaacacaggaatgtcagaatctccgagaagagctcaccaagctta atgagcaattgaagaagctaaatgagaaaaacaaagaactggaaggtgctcaagatcacaatgtgaccatacagagtcag ctcaccagagcgaaagaagaattggaagcagagaagagagatttagtccggacgagtgaaagaagagctcaagaactaga acatttaaatgaggatgttaaacgtctgaatgagaaacttacagcaacaaacactgcaaagatagagcttcagttaaaac tggatgagcttcagacatcagccctttctgtaaaacaccgtgagcagaggtgggaacaagaaaaggagctattgcagaat cagaacgcttggctgaatactgaactgaaggccaaaacagatgagcttctggtccttgctcgagaaaaaggaagtgaaat attggagctcaaatgtggcctggagaacaagaaagaggaggtagaggaaatcaattttcaatcaatcaatattactatgg cggatcaggtttctagactggatgaacaagtcactggactaaaacagtctaacaacaatctacaaaaacacgtggaggat cttttggaaaaattaaaagaggcaaaagagcaacaagctagtatggaagagagattccacaatgaactaaatgctcatat caagttatctaatttatataagctttacaatgcctatgtagaagctcaggatcagctgcttttggaaaaattagagaata agaggatcaataaatatttggatgaaatagtgcaggaagtggaagccaaggcacccattctgaagcgccagcgagaagaa tatgaacgctcccaaaaggctgtagcgagtctttctgctaaacttgagcaagctatgaaggaaatccagcgcttacaaga agaggctgataaagcaaacaagcatgtttctgtctttgaaagagagaatcagaggtttgaaattcaggtcaaagatcttt cacaacagataagagtattattgatggagcttgaagaagcccgaggtaatcacgtcatccgtgatgaagaagtcagttct gcagacatcagcagctcttctgaagtaataagtcaacgcctggtttcctaccgaaacattgaggaacttcagcagcaaaa tcaacgcctcttaatagctcttcgagagctgggagaggcaaaggagaaagaagaacaagaaaccacttctaccaagattt ctgagctccagaatcaacttggagaagctataattgagctagaaaagctgcgtgaggcacggcaccatcaaatgcagctt gtagagtccatcgttcgtcagcgtgacatgtatcggattttgctggcccaaactactggagttgccattccattgcaagc ttcaagcatcttgtctgaggaactgacatcaacccctaaacgcctgtcaggttccctccctgcttcaactccaacttcag tcccagtgatcgagtcaactgaagcagcagaagcaaaggctgcccttaaacagctgcaggaattttttgagaactataag aaagaaaaggcagagaatgacaagctgctgaatgaacaaaatgagaagcttcaagaacaggttactgacttgaagtcaca gaacacaaagatttctacccagcttgaatttgcctctaagcgttatgagatgttgcaagataacgtagagggatatcggc gagagatcacatcactgcatgagaaaattcaaaagctgtcagcaactactcagaagcaggaacagatcatcaacacaatg actcaagaattaagaggagccaatgaaaaattaacggttgcagaggtgagagcagagaatttgaaaaaagaaaaagatat tttaaaaatggccgaagttcgtttgactcagcaaaaggaatctttaatagcagaacatagaggacaaaatctgctcctta ctaatctgcaatctattcaggtaattttggaaaagggagagacagaaactcgacagaggctcaataatcaaattgagaag ttggaaagagaaatagcccagctgaagaaaaaactggaaaatgaggtggagcaaagacacacactttccaaaaatcagga tattcacctcttggatgctaaaagacagtgtgaaactgaagtgaatcttcatgctaacaccaaagaactgctgaagaatg ctcaaaaggagatagcagcgttaaagcagcagctccacaatatggaagctcaaatagcttctcagtcattgcagagagct gctggccaaggccaatctagtgttggagaggatgtggatgatcttgtaagtcgattgaggcaatctgatgaccaaattaa tgatttgaaggagaggctaaagactgccacaagtaatgtggagcagtaccgtacgatggttgtgagccttgaagagtccc ttaacaaagaaaagcaggtgactgaagaggttcgggccactgttgaggctcgcttgaaagagtcctcagagtatcattcc cagctagagaagaaactaatggaggctgagaaagaaaaacaggagcttcaagatgaaaaacgtaaagccatagaaaacat ggaacaacagctttccgaattaaagaaaaacctctccaatatgaagtctgaacttcaggaagctctccagagagcaaaca cagccctcagcaatgaacaacaagctaaacgggactgccaagagcaagcaaagatagctgctgaagctcaaagtaaatat gaacgggagctgatgcttcattcttctgatgttgaagctttacaagctgtcaaggagcaagttgcaaagaattccacaat aaagcagcaattagaggaagcagcccaaaaagcagaatccaccttgcgagagagcagagcttcatgggaagagcgagaaa gagcattaaaggatgaagcttctaagcttgcatctcgctgtgaagacttagagaaacaaagccaactgttgcacgaacag ctggaaactctgagcaataagatgatggcttcaatgaaggaaggcgggccaggagccctgaatgtgtctctcagtgaaga aggaaaatcacaagagcaaatggtagaaattatcaggtttatccgcagagaaaaggagattgcagaaactcgatttgagg tggcacaagtagaaagcttacgctatcgccagcaggtggaacatttagaaagagagctgcatgagctgcagcaaagtctg aatgcagagagggagaaagtacaagtgactgcaaaaacaattgctcaacatgaagaattaatgaagaagactgagaccat gaatgttttgatagaaacaaataagatattaagagaagagaaagagaaattggaacaagaacttcagcaaatgcaagcaa aagtacgtaagctggaagctgatatcttgcctctgcaagaatccaatgctgagctcagtgagaaaagtgggatgcttcaa gcagagaaaaagttgttggaagaggatgtcaagcgatggaaaacccggactcagcatttattaagccaacaaaaagatgc agatgttgaagaatatcggaagcttctttcggagaaggaggtgaacaacaaacgcattcagcagctaagtgaagaaatag gcagacttaaagcagaaattgcaagaaccaatgcatcactgacaacaaatcagaatctggtccagagcctccgggaagat ctaacaaaaacaaaaacagaaaaggaaacccttcaaaaggacttggaaatgaaagtagtagacatccaagagaaagtcaa gacaataactcaagtcaagaaaattggacgccgctacaagactcagtatgaagagctgaaagcacagcatgataagatgg ttgctgaggcttccacacagtcttttgcggagcagccagagcagcatgcgtcagacaaagaacatcaggagatgaaagag gctctaaaccaagctgaggtcaaaataaaagctttagaggggcagattgaagttcttcagaagactctaggagagaagga cactgaagtaaagaatcttcaggagcaagtatcccagctgcaatcagagctttcccgccttcaacaagatctacaggaaa aaacaacacaggaagaacaactcagacagcaagtgactgaaaaagaggagaaaactaaaaagacacttctggctgccaag cagaggattgcacagctggcaggggcaaaagatcagctgactaaagaaaatgaggaatggaagcaaaagagtagcacatt ggaggaacaaaagacagagttagaagttcggatgagtgcacttaaatcacaatacgaaggccggatttgtcgtctagagc gagaactcagagagcaacaagagagacatcatgaacagcgagatgagcctccagaatctactagcaaggctccagagcag caaaggcagatcactctcaaatcaactcaagctgcaggcgaccgaggaatagctagtgcttcagatccaccaacagccaa catcaagccaactcctgttgtgtctgccccaagcaaagtgacagctgctgccatacccgggaacaagcccaccccaaggg ctagcatccgtccaatggttacacctgctacagtcaccaatcctacaactactccaacagccaccgttatgccaacaaca caagtggagactcaagaagccatgcagtcagaaggaccagttgaacacgttccagtctttggaagcacaagcggatctgt gcgctccacgagccccaatgtgcagacctctctttcccagcccatcttgacggttccgcaacagagtcaggccacagctt ttgtacagcctactcaacagagtcatcctcagattgaaccagctgcccaagagccgtccccagccatcatggaggtggtg cagagctcccagatggaaagaccttctacgtcaacggcagtgtttggcacagtttcagctactcccagctcgtctctgcc caaacgagcacgagaggaagaagaagagaatgccgtcgaaaactcagaacagattcccgaggaaatggttgatctgcctc ttgcaaagaaactgagaactttgcaaagagttgggccagaggaggaagtagctgcagaagagagcacagacggagaaata gaagctcagacttacaatcaggattcacaggattccattggtgaaggtgtcacgcagggcgagtatacacctatggagga tagtgaggaaacttctcagtccctccctatagaccttggacctcttcaatcagatcagcagaatacaacctcatcccaag agtgtcagggcaagagagatgatgtcattgtcattgacagtgatgatgaagaggatgacgatgaggaaaatgatggtgaa gcagaagaatatgaagatgaagaagatgaggatgacgacgacgatgatgaagacacaggaatgggggacgaaggcgagga tagcaatgaaagcactggcagcgtagatggtaacgatggatatgaagcagatgatgctgaggctgctgatgggatggatc ccagtacagaaactgaagagagtattgctggaggtgaaaatagccagagggcagctgactcccagaactgtggcgatggg agcacaggtactgtagagtctacattctctcaggaaagcccaagggaacagcagcccacatctgcttctgagagacaagt tcctcgtccacctcgacctcatcccttacctccacgattaactatccatgctattcctgctccaccccaggagctgggac caccagtccagaggatacaaacggctcggagacagtctgtggggcgtggacttcaactaactccaggtataggtggcatg cagcaacatttcttcgatgatgaggaccggacagttccaagcaccccaacattggtggtaccgcatcgtacagatgggtt cgcagaagcaattcattctcctcaggttgccggagttcctcggttcaggtttggacctcctgaagatatgccacaaacct ctggccaatcagatcttggccaacttgcatcgcaaggagggctaggaatgtatgaaacacccctctttcttgcccatgaa gaggaatccggaggccgtagtgtcccaacaactccactacaagttgcagcacctgtgtctgtatttactgaaagcgcttc tgccgatgcttccgagcatgcctcccaatctgttccaatggttacaacttccactggtaacttatcaaccacttcagaat ctggaacaggtgatgatggtgacgaggtttttgtggaggcagaatcagaaggaatttcttcagaggtgggtctagacatt gatagccagcaagaggaggaatcatctcaaactcctgatgaatcagatcttccttctaccagtcaagatcctccttctag ttcatctgcagatacaagcagcaatcatcccaaacccttccgacgcgttagacttcagcccccaaccttaagggctggag tccgtggtcgtcagtttaatagacacaggggtataactcattcaatgggtggcagaggaggcctgaacagaggcaatatt aactaaatgctgtacaaattttggaaatggtgtatactgtttagtctgcctttattctgcattagtataatagctgccaa gcttaaagcagtctttttttaaaatgttaa |
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Protein
| Protein ID | habu1_s8317_g18619.t1 |
|---|---|
| Definition | - |
>habu1_s8317_g18619.t1 MSELMCIQLDSRKPRGGLCSANLNFEEEIGTNLEKQFRSGVPNPWSVDQYRAAACQQPVRTNKQSPIRGMQARNQSLVPK RDNTVLKYINGCFTEQQYFEVEKRLAQSQERLVNETQECQNLREELTKLNEQLKKLNEKNKELEGAQDHNVTIQSQLTRA KEELEAEKRDLVRTSERRAQELEHLNEDVKRLNEKLTATNTAKIELQLKLDELQTSALSVKHREQRWEQEKELLQNQNAW LNTELKAKTDELLVLAREKGSEILELKCGLENKKEEVEEINFQSINITMADQVSRLDEQVTGLKQSNNNLQKHVEDLLEK LKEAKEQQASMEERFHNELNAHIKLSNLYKLYNAYVEAQDQLLLEKLENKRINKYLDEIVQEVEAKAPILKRQREEYERS QKAVASLSAKLEQAMKEIQRLQEEADKANKHVSVFERENQRFEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADIS SSSEVISQRLVSYRNIEELQQQNQRLLIALRELGEAKEKEEQETTSTKISELQNQLGEAIIELEKLREARHHQMQLVESI VRQRDMYRILLAQTTGVAIPLQASSILSEELTSTPKRLSGSLPASTPTSVPVIESTEAAEAKAALKQLQEFFENYKKEKA ENDKLLNEQNEKLQEQVTDLKSQNTKISTQLEFASKRYEMLQDNVEGYRREITSLHEKIQKLSATTQKQEQIINTMTQEL RGANEKLTVAEVRAENLKKEKDILKMAEVRLTQQKESLIAEHRGQNLLLTNLQSIQVILEKGETETRQRLNNQIEKLERE IAQLKKKLENEVEQRHTLSKNQDIHLLDAKRQCETEVNLHANTKELLKNAQKEIAALKQQLHNMEAQIASQSLQRAAGQG QSSVGEDVDDLVSRLRQSDDQINDLKERLKTATSNVEQYRTMVVSLEESLNKEKQVTEEVRATVEARLKESSEYHSQLEK KLMEAEKEKQELQDEKRKAIENMEQQLSELKKNLSNMKSELQEALQRANTALSNEQQAKRDCQEQAKIAAEAQSKYEREL MLHSSDVEALQAVKEQVAKNSTIKQQLEEAAQKAESTLRESRASWEERERALKDEASKLASRCEDLEKQSQLLHEQLETL SNKMMASMKEGGPGALNVSLSEEGKSQEQMVEIIRFIRREKEIAETRFEVAQVESLRYRQQVEHLERELHELQQSLNAER EKVQVTAKTIAQHEELMKKTETMNVLIETNKILREEKEKLEQELQQMQAKVRKLEADILPLQESNAELSEKSGMLQAEKK LLEEDVKRWKTRTQHLLSQQKDADVEEYRKLLSEKEVNNKRIQQLSEEIGRLKAEIARTNASLTTNQNLVQSLREDLTKT KTEKETLQKDLEMKVVDIQEKVKTITQVKKIGRRYKTQYEELKAQHDKMVAEASTQSFAEQPEQHASDKEHQEMKEALNQ AEVKIKALEGQIEVLQKTLGEKDTEVKNLQEQVSQLQSELSRLQQDLQEKTTQEEQLRQQVTEKEEKTKKTLLAAKQRIA QLAGAKDQLTKENEEWKQKSSTLEEQKTELEVRMSALKSQYEGRICRLERELREQQERHHEQRDEPPESTSKAPEQQRQI TLKSTQAAGDRGIASASDPPTANIKPTPVVSAPSKVTAAAIPGNKPTPRASIRPMVTPATVTNPTTTPTATVMPTTQVET QEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQTSLSQPILTVPQQSQATAFVQPTQQSHPQIEPAAQEPSPAIMEVVQSSQ MERPSTSTAVFGTVSATPSSSLPKRAREEEEENAVENSEQIPEEMVDLPLAKKLRTLQRVGPEEEVAAEESTDGEIEAQT YNQDSQDSIGEGVTQGEYTPMEDSEETSQSLPIDLGPLQSDQQNTTSSQECQGKRDDVIVIDSDDEEDDDEENDGEAEEY EDEEDEDDDDDDEDTGMGDEGEDSNESTGSVDGNDGYEADDAEAADGMDPSTETEESIAGGENSQRAADSQNCGDGSTGT VESTFSQESPREQQPTSASERQVPRPPRPHPLPPRLTIHAIPAPPQELGPPVQRIQTARRQSVGRGLQLTPGIGGMQQHF FDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSGQSDLGQLASQGGLGMYETPLFLAHEEESG GRSVPTTPLQVAAPVSVFTESASADASEHASQSVPMVTTSTGNLSTTSESGTGDDGDEVFVEAESEGISSEVGLDIDSQQ EEESSQTPDESDLPSTSQDPPSSSSADTSSNHPKPFRRVRLQPPTLRAGVRGRQFNRHRGITHSMGGRGGLNRGNIN |
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