Gene
| Gene Model ID | habu1_s85_g00483 |
|---|---|
| Locus | habu1_scaffold85 : 31694 ... 56395 : - |
| To GenomeBrowser | habu1_scaffold85:31694..56395 |
| Genes list of scaffold | habu1_scaffold85 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| phosphorylated adapter rna export protein | GO:0005730 GO:0005737 GO:0006408 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s85_g00483.t2 | 1 | 1 | RNA_GG_bind | 225 | 311 | 1.6e-32 | 111.0 | 7.7e-36 | 3.8e-32 | 109.8 |
| habu1_s85_g00483.t2 | 1 | 1 | DUF4513 | 396 | 500 | 2.4e-37 | 127.7 | 9.40005e-41 | 4.7e-37 | 126.7 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.7 |
| Venom grand-1 | 5.3 |
| Pit, infrared sensing | 4.4 |
| Nose | 6.0 |
| Brain-1 | 6.4 |
| Eye | 6.0 |
| fetal fibroblast | 7.1 |
| venom gland-2 | 6.1 |
| Brain-2 | 7.3 |
| Spleen | 5.3 |
| Lung | 7.2 |
| Liver | 10.1 |
| Kidney | 12.3 |
| Pancreas | 7.5 |
| Small intestine | 4.0 |
| Large intestine | 5.4 |
| Stomach | 6.4 |
| heart | 9.3 |
| ovary | 17.0 |
| cheek muscle | 18.5 |
Transcript
| Transcript ID | habu1_s85_g00483.t1 |
|---|---|
| Definition | - |
>habu1_s85_g00483.t1 acaggtctggcaaactcttaccagttcttcctgtgagctgaaggcttaagagggcagccgatattttgctgcacagaggg aaaccggcgagctttttgtaatgcgcagacggggagaatgatagtggtaatccggcaatatcttttccaagcagcagttc acaatcaacaacaagtgttccttatcggacagtgaaaagtatggattcaactgatgaaagtttttcagattctgatgaag agagtggtctatggaagcgaaagcgacaaaaatgttcaaaccatcctcccctcaaaccagagcctttccagttttctcca aaccctcacaaagagatccgtaaaaaagtcaacaatatatggggtgaagttctgcagaaacagaatcaagatgatatgtc aaaaaaccttgggattctatggatggatggcaacctggacagaagtcgaggctccgagacctacaactacatgttagcaa aagagttggtgaaaagctctgaatcagaagcagttaagacactagacaaagagttggaagaatatatgcaagatgataaa aagattgtatcaaaagaggaggaggaagaggtgaatggacaaggtctctggaaacggaaaaggcccataaaggagaaatt cggtcaaagacaagaaatgaattataaagggagatatgaaattacagaagatgatcctgaagaaaaagtggcagatgaaa ttgcctatcggcttcatgaaccaaagaaagatctaattgcacgggtagtgaaaatcattgggaaaaagaaatctattgaa ctactgatggaaaccactgaggtggagcaaaatggaggtctcttaatcatggatggttctagaagaagaactccaggtgg agtttatataaacttgctgaaaaacacaccttgcataaccagtgaacaaatcaaggaaatcttctatattgaaaatcaaa aggagtatgagaacaaatgtgctgcaaagaagaggagatttcaagtgctgggcaaaaagatgaagcaagcgattaaagga cttaatcttcacgaatacgatgatgcctcccgagagacttttgcgagcgacacaaatgaagccctggcttctctggatga cttgcaagaaggacatggggaaataaaatttgatgtagaacatgtttttgaaatagatgaaggatgttttggacaccttt atttagattgtgtgctaaggtttattcactgccatttaccaagtttttcatgcaaacatgggatgattccaaaccggtat gtgatgccctggaaacaagatatgaaataccgagcattacatttgcagcatgctgaccaggttgaactatatagtggagc ccgagaagacaccctatttctggagaagagtgagaggctttgccatggggaggaccgaaagaaacttatgcagaaagttc cacaagaagaaattattgtggatattcccatttattctcacctctccagataccacaaatccatggtggcttatggcttc aggatcaaactctgagattcctatcttccattgggatttcatcagctgtacataaaacaatgttacaagaaaaaaaaaag ctgtgtttgcttggtctttttcctaattaaggtaactcagtgaaatatatttttaaactaggaaagtaagatttgatcag ctaggaataatttaagatgtcctttcagatatttgcatacttttttcttttaatattaaaactttgcattagactggatt ct |
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| Transcript ID | habu1_s85_g00483.t2 |
| Definition | - |
>habu1_s85_g00483.t2 tggggctgcccgagtttctgcctcactcgcgcatcttaaaggcaaaggcgcgaacaactgaagtttatccaatggctgca gaagtcaaaacgcattttcacacctgtctagagcagtgtttctcaaccttgacaattttaaggcatgtggacttcaactc ccagaattccacagccagcaatgctggctgtggaatgctgggagttgaagtccacatgcctttaaattgtcaaggttgag aaacactggtctagagcataaaatacaggtctgaaaggaccaacgtaggaaatctctcaatagagaaaacggatgtaaat tctcgggcggaaagaaatgaaaagactacaattcgtgaagattcaagaaggaagggaagaaatgctaattgtcccgcctt tttttccttagagcaaagcattgtggtctctgtagtttttctagactaaggccagcatttgtccctttcgcggcttctgg tctgattgagagaggaaagatggcgtcgggagttccaagaatggagcaggatgtcgaagatggagaacttttggactcgg actccgaaatgccggtctcggctccttccaggagtccccaacagaatgatagtggtaatccggcaatatcttttccaagc agcagttcacaatcaacaacaagtgttccttatcggacagtgaaaagtatggattcaactgatgaaagtttttcagattc tgatgaagagagtggtctatggaagcgaaagcgacaaaaatgttcaaaccatcctcccctcaaaccagagcctttccagt tttctccaaaccctcacaaagagatccgtaaaaaagtcaacaatatatggggtgaagttctgcagaaacagaatcaagat gatatgtcaaaaaaccttgggattctatggatggatggcaacctggacagaagtcgaggctccgagacctacaactacat gttagcaaaagagttggtgaaaagctctgaatcagaagcagttaagacactagacaaagagttggaagaatatatgcaag atgataaaaagattgtatcaaaagaggaggaggaagaggtgaatggacaaggtctctggaaacggaaaaggcccataaag gagaaattcggtcaaagacaagaaatgaattataaagggagatatgaaattacagaagatgatcctgaagaaaaagtggc agatgaaattgcctatcggcttcatgaaccaaagaaagatctaattgcacgggtagtgaaaatcattgggaaaaagaaat ctattgaactactgatggaaaccactgaggtggagcaaaatggaggtctcttaatcatggatggttctagaagaagaact ccaggtggagtttatataaacttgctgaaaaacacaccttgcataaccagtgaacaaatcaaggaaatcttctatattga aaatcaaaaggagtatgagaacaaatgtgctgcaaagaagaggagatttcaagtgctgggcaaaaagatgaagcaagcga ttaaaggacttaatcttcacgaatacgatgatgcctcccgagagacttttgcgagcgacacaaatgaagccctggcttct ctggatgacttgcaagaaggacatggggaaataaaatttgatgtagaacatgtttttgaaatagatgaaggatgttttgg acacctttatttagattgtgtgctaaggtttattcactgccatttaccaagtttttcatgcaaacatgggatgattccaa accggtatgtgatgccctggaaacaagatatgaaataccgagcattacatttgcagcatgctgaccaggttgaactatat agtggagcccgagaagacaccctatttctggagaagagtgagaggctttgccatggggaggaccgaaagaaacttatgca gaaagttccacaagaagaaattattgtggatattcccatttattctcacctctccagataccacaaatccatggtggctt atggcttcaggatcaaactctgagattcctatcttccattgggatttcatcagctgtacataaaacaatgttacaagaaa aaaaaaagctgtgtttgcttggtctttttcctaattaaggtaactcagtgaaatatatttttaaactaggaaagtaagat ttgatcagctaggaataatttaagatgtcctttcagatatttgcatacttttttcttttaatattaaaactttgcattag actggattct |
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Protein
| Protein ID | habu1_s85_g00483.t1 |
|---|---|
| Definition | - |
>habu1_s85_g00483.t1 MDSTDESFSDSDEESGLWKRKRQKCSNHPPLKPEPFQFSPNPHKEIRKKVNNIWGEVLQKQNQDDMSKNLGILWMDGNLD RSRGSETYNYMLAKELVKSSESEAVKTLDKELEEYMQDDKKIVSKEEEEEVNGQGLWKRKRPIKEKFGQRQEMNYKGRYE ITEDDPEEKVADEIAYRLHEPKKDLIARVVKIIGKKKSIELLMETTEVEQNGGLLIMDGSRRRTPGGVYINLLKNTPCIT SEQIKEIFYIENQKEYENKCAAKKRRFQVLGKKMKQAIKGLNLHEYDDASRETFASDTNEALASLDDLQEGHGEIKFDVE HVFEIDEGCFGHLYLDCVLRFIHCHLPSFSCKHGMIPNRYVMPWKQDMKYRALHLQHADQVELYSGAREDTLFLEKSERL CHGEDRKKLMQKVPQEEIIVDIPIYSHLSRYHKSMVAYGFRIKL |
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| Protein ID | habu1_s85_g00483.t2 |
| Definition | - |
>habu1_s85_g00483.t2 MEQDVEDGELLDSDSEMPVSAPSRSPQQNDSGNPAISFPSSSSQSTTSVPYRTVKSMDSTDESFSDSDEESGLWKRKRQK CSNHPPLKPEPFQFSPNPHKEIRKKVNNIWGEVLQKQNQDDMSKNLGILWMDGNLDRSRGSETYNYMLAKELVKSSESEA VKTLDKELEEYMQDDKKIVSKEEEEEVNGQGLWKRKRPIKEKFGQRQEMNYKGRYEITEDDPEEKVADEIAYRLHEPKKD LIARVVKIIGKKKSIELLMETTEVEQNGGLLIMDGSRRRTPGGVYINLLKNTPCITSEQIKEIFYIENQKEYENKCAAKK RRFQVLGKKMKQAIKGLNLHEYDDASRETFASDTNEALASLDDLQEGHGEIKFDVEHVFEIDEGCFGHLYLDCVLRFIHC HLPSFSCKHGMIPNRYVMPWKQDMKYRALHLQHADQVELYSGAREDTLFLEKSERLCHGEDRKKLMQKVPQEEIIVDIPI YSHLSRYHKSMVAYGFRIKL |
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