Gene
| Gene Model ID | habu1_s85_g00485 |
|---|---|
| Locus | habu1_scaffold85 : 95964 ... 172565 : - |
| To GenomeBrowser | habu1_scaffold85:95964..172565 |
| Genes list of scaffold | habu1_scaffold85 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s85_g00485.t3 | 1 | 1 | GRAM | 115 | 180 | 6.4e-13 | 48.0 | 4.3e-16 | 1.6e-12 | 46.7 |
| habu1_s85_g00485.t3 | 1 | 1 | DUF4371 | 429 | 601 | 1.2e-23 | 83.8 | 4.2e-27 | 1.6e-23 | 83.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s85_g00485.t3 | gi|530648422|ref|XP_005310777.1| | PREDICTED: GRAM domain-containing protein 3 isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.9 |
| Venom grand-1 | 0.7 |
| Pit, infrared sensing | 0.6 |
| Nose | 1.2 |
| Brain-1 | 0.8 |
| Eye | 0.5 |
| fetal fibroblast | 1.1 |
| venom gland-2 | 1.2 |
| Brain-2 | 0.4 |
| Spleen | 1.8 |
| Lung | 1.1 |
| Liver | 1.0 |
| Kidney | 0.9 |
| Pancreas | 1.7 |
| Small intestine | 1.7 |
| Large intestine | 1.0 |
| Stomach | 3.4 |
| heart | 0.7 |
| ovary | 0.2 |
| cheek muscle | 3.7 |
Transcript
| Transcript ID | habu1_s85_g00485.t1 |
|---|---|
| Definition | - |
>habu1_s85_g00485.t1 gtcgaggactaaaccggtcagaaaacccaggagtagaagaggaagagtccagtcttgtacgcagctggtcaatatgccac cgaagaatgtggccgtcttccaaggaaacctcgtacgacaagggccccgtgaccttgcagaccacagctggaatcacagt gttcataagggaattatgattcctcctaaaaattgttcagaaaatgaaaacggaacagaagaaaagaagaaatctggaaa accaggctttggggtgccacaaatatcatttaatgaggccgactattttgaagaccagaaaaaagttgcaattgcacggt caaagacaattgtggataatagtttcttgacgatagatggcaagaacgactcaaaagctgaaaggaagaagcatacctca aaccagtttaaggcaaatgctcattttcacaagctgtttctggatgtcccaattgatgaacctttgagacaaaattttac ctgtgccttacaaaaagaaattgtataccaagggaagctatatgtatcggagaactggatttgcttcaattccaaagtct ttggcaaaggtaccaagattagtatacctgtgttatctgtaaccctaataaagaagactaaaactgcccttttagtgcca aatgctctcattataactacagtctcagataggcacatgttcgtctcttttctgtccagagacactgtttacaaattgtt aaaatctatttgcagtcatctagaggatggcaacagtcctaatccttcttccctagaaaatagtttcagagctgatcggc ctacaacattacccctggatttcaatcatgatttctctgaattggatggcatcatacagagacgtagacaggagatggaa gaatccagcagcactggttctcaaacaccagaattggaacacttacaagatcaccatgagtctgataaccagtctcattt caaaagttccaagacagaaatgaaagatgtccataaaaatgtacagtctaaatgtagacgtgatgatcaaatcaggaatc tttcgggaaacatttcttcaggaatcctcggatcttttgacagaatgaattttcaattatttgtgtcggtgactcacgta ctcattgtttatgcaattcttgtttttatcctcatatgttccacattctatttgcgatataaagttcatcatttggaaga gcaacttgtattcatggcttctactgtggatccacatatgaatgaacatccaatacaaggtggtttgggatatcaccaaa aatttaatgttgacggtctgtatgcagagctaacagctaatcttatcaaactggaaaagatacaaagcaatttacagaag ctacttgaagacaccaggcaaaccttacccttacgtggtcactctgaagatttaaatacagatggtaactgtggaaattt cttagaaactttcaagttacttgccaaatatgacccagttgccaaacaacatcttcacagagtacaacgcacagatggtt acattgtgtcctatctctctccacagagccagaatgagtttattagcctgctcggcgatcacattcgaacaatcatcttt caaaatatcataaaggccaagtattttgctataacgtttgatagcactcctgatatttcacacactgaccaaatatccca agtgattcgatatgtgcatattgaagattcaggagtccatgtgacagagtctttcattgactttattcagttatatggga aatcagctgatgtcattacaaaacaaatttgtgacaagttgcaagctgatggccttaaactagagcattgctacggccag ggatacgacaatgctgcgactatggctggacacattagtggtgtacaaaaacgtattttggatatgaatcccaaagcaat gtttgtgccatgtaacaatcactcgctcgatcttgctgggatgcatgcagttggtgttgggacaaagtctgttactttct ttggcactgtggaaaaggtgtattcatttttctcaagttccacccacaggtgggatatccttaagaaacatgtaccaatt cgtgtaaagcgatcgtgtaacacaagatggagttcaacgcatgaagctgtatgcgtacttgctgaacacactgagaaaat aatagacgctttggaagcgttgagagatgggccggaagaaacctctgaaaccaggggtgatgcaggaagtcttttagttt gcataatgacatatgtttttttctctttcttgcatttttggaacccagtactaaccgaagtaaatgatactcagatctac ctgcagcaagaaggacttgcgcttgatcaatgcgtgcaaaagttaaaagcattgactttattttgtcatgaaaaatgtga tagtctagtgtcaaaggcaactgagaaagctctgcaggtatgcaaaacctattgcatacctacagagagaagagttggaa gacgcaagaagatggatggtgagaacagttgcgatgctggcttgaccttaatacaggaaacaagcagagaacaactggaa gcaattgatcagcttcaggcagaaattaaaaaacgtactacgcagatgaatacgctgcaccagcgatttgcttttttgca aatccaaacattgttggatactaaaaaagatgattttattaagaaacaaattcagcacacgtgtgctcagtacacggaat tgaatgctgcatctatgctcaccgaaataactcgacttcggcaccacattatcttgtataaggaggtcaatcctgatgag caggttgcaaactgatcagctttagatttgcttcgctgggtgtataagtggaagctgcaagaaagtttaactaactttgt tgtcacattaagaatctttcttactatcactgtttctacagcgagttgtgaaagaagtttctcaaaacttaaactaatta aaacatatcagagatctacaatgagccaagaaagactgagtaatctagcaatactgtccattgagagagactttaatgta gatttcaattccgttgttgaaaaatttgcgctaattaaaagcaggcgaatttaaattaatctgtatattatatacagatt gatatcttgcacttctattaaagaattacaattagaggtacaggattgaggaagttggctccatctagcccagtcttgga tcatctccagggtatggttccattttgatgtttagtttttgttcttgatattttttgtcgtttacgatggttgtgagacg acatataatagcatggcccatgctaggttactacatttgtagatttgtattcatagacctgctgaaaatgtggagaatgt gtaatgcatgttcgcactcaataaagtgtttgaaaataaacttgtat |
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| Transcript ID | habu1_s85_g00485.t2 |
| Definition | - |
>habu1_s85_g00485.t2 gtcgaggactaaaccggtcagaaaacccaggagtagaagaggaagagtccagtcttgtacgcagctggtcaatatgccac cgaagaatgtggccgtcttccaaggaaacctcgtacgacaagggccccgtgaccttgcagaccacagctggaatcacagc cctattgacaacgctgaatcagtgttcataagttcagaaaatgaaaacggaacagaagaaaagaagaaatctggaaaacc aggctttggggtgccacaaatatcatttaatgaggccgactattttgaagaccagaaaaaagttgcaattgcacggtcaa agacaattgtggataatagtttcttgacgatagatggcaagaacgactcaaaagctgaaaggaagaagcatacctcaaac cagtttaaggcaaatgctcattttcacaagctgtttctggatgtcccaattgatgaacctttgagacaaaattttacctg tgccttacaaaaagaaattgtataccaagggaagctatatgtatcggagaactggatttgcttcaattccaaagtctttg gcaaaggtaccaagattagtatacctgtgttatctgtaaccctaataaagaagactaaaactgcccttttagtgccaaat gctctcattataactacagtctcagataggcacatgttcgtctcttttctgtccagagacactgtttacaaattgttaaa atctatttgcagtcatctagaggatggcaacagtcctaatccttcttccctagaaaatagtttcagagctgatcggccta caacattacccctggatttcaatcatgatttctctgaattggatggcatcatacagagacgtagacaggagatggaagaa tccagcagcactggttctcaaacaccagaattggaacacttacaagatcaccatgagtctgataaccagtctcatttcaa aagttccaagacagaaatgaaagatgtccataaaaatgtacagtctaaatgtagacgtgatgatcaaatcaggaatcttt cgggaaacatttcttcaggaatcctcggatcttttgacagaatgaattttcaattatttgtgtcggtgactcacgtactc attgtttatgcaattcttgtttttatcctcatatgttccacattctatttgcgatataaagttcatcatttggaagagca acttgtattcatggcttctactgtggatccacatatgaatgaacatccaatacaaggtggtttgggatatcaccaaaaat ttaatgttgacggtctgtatgcagagctaacagctaatcttatcaaactggaaaagatacaaagcaatttacagaagcta cttgaagacaccaggcaaaccttacccttacgtggtcactctgaagatttaaatacagatggtaactgtggaaatttctt agaaactttcaagttacttgccaaatatgacccagttgccaaacaacatcttcacagagtacaacgcacagatggttaca ttgtgtcctatctctctccacagagccagaatgagtttattagcctgctcggcgatcacattcgaacaatcatctttcaa aatatcataaaggccaagtattttgctataacgtttgatagcactcctgatatttcacacactgaccaaatatcccaagt gattcgatatgtgcatattgaagattcaggagtccatgtgacagagtctttcattgactttattcagttatatgggaaat cagctgatgtcattacaaaacaaatttgtgacaagttgcaagctgatggccttaaactagagcattgctacggccaggga tacgacaatgctgcgactatggctggacacattagtggtgtacaaaaacgtattttggatatgaatcccaaagcaatgtt tgtgccatgtaacaatcactcgctcgatcttgctgggatgcatgcagttggtgttgggacaaagtctgttactttctttg gcactgtggaaaaggtgtattcatttttctcaagttccacccacaggtgggatatccttaagaaacatgtaccaattcgt gtaaagcgatcgtgtaacacaagatggagttcaacgcatgaagctgtatgcgtacttgctgaacacactgagaaaataat agacgctttggaagcgttgagagatgggccggaagaaacctctgaaaccaggggtgatgcaggaagtcttttagtttgca taatgacatatgtttttttctctttcttgcatttttggaacccagtactaaccgaagtaaatgatactcagatctacctg cagcaagaaggacttgcgcttgatcaatgcgtgcaaaagttaaaagcattgactttattttgtcatgaaaaatgtgatag tctagtgtcaaaggcaactgagaaagctctgcaggtatgcaaaacctattgcatacctacagagagaagagttggaagac gcaagaagatggatggtgagaacagttgcgatgctggcttgaccttaatacaggaaacaagcagagaacaactggaagca attgatcagcttcaggcagaaattaaaaaacgtactacgcagatgaatacgctgcaccagcgatttgcttttttgcaaat ccaaacattgttggatactaaaaaagatgattttattaagaaacaaattcagcacacgtgtgctcagtacacggaattga atgctgcatctatgctcaccgaaataactcgacttcggcaccacattatcttgtataaggaggtcaatcctgatgagcag gttgcaaactgatcagctttagatttgcttcgctgggtgtataagtggaagctgcaagaaagtttaactaactttgttgt cacattaagaatctttcttactatcactgtttctacagcgagttgtgaaagaagtttctcaaaacttaaactaattaaaa catatcagagatctacaatgagccaagaaagactgagtaatctagcaatactgtccattgagagagactttaatgtagat ttcaattccgttgttgaaaaatttgcgctaattaaaagcaggcgaatttaaattaatctgtatattatatacagattgat atcttgcacttctattaaagaattacaattagaggtacaggattgaggaagttggctccatctagcccagtcttggatca tctccagggtatggttccattttgatgtttagtttttgttcttgatattttttgtcgtttacgatggttgtgagacgaca tataatagcatggcccatgctaggttactacatttgtagatttgtattcatagacctgctgaaaatgtggagaatgtgta atgcatgttcgcactcaataaagtgtttgaaaataaacttgtat |
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| Transcript ID | habu1_s85_g00485.t3 |
| Definition | - |
>habu1_s85_g00485.t3 gtcgaggactaaaccggtcccctggccaccatagatggctgcgcgcaagcgccttcatccggacaatgccgggatggccc ccatggagggaagccaagattctagatctcaacgagcctgacggggacgaactaaagcccgtcagggtggccagtaaaaa ggaaaaagcggctttaatccattcagaaaatgaaaacggaacagaagaaaagaagaaatctggaaaaccaggctttgggg tgccacaaatatcatttaatgaggccgactattttgaagaccagaaaaaagttgcaattgcacggtcaaagacaattgtg gataatagtttcttgacgatagatggcaagaacgactcaaaagctgaaaggaagaagcatacctcaaaccagtttaaggc aaatgctcattttcacaagctgtttctggatgtcccaattgatgaacctttgagacaaaattttacctgtgccttacaaa aagaaattgtataccaagggaagctatatgtatcggagaactggatttgcttcaattccaaagtctttggcaaaggtacc aagattagtatacctgtgttatctgtaaccctaataaagaagactaaaactgcccttttagtgccaaatgctctcattat aactacagtctcagataggcacatgttcgtctcttttctgtccagagacactgtttacaaattgttaaaatctatttgca gtcatctagaggatggcaacagtcctaatccttcttccctagaaaatagtttcagagctgatcggcctacaacattaccc ctggatttcaatcatgatttctctgaattggatggcatcatacagagacgtagacaggagatggaagaatccagcagcac tggttctcaaacaccagaattggaacacttacaagatcaccatgagtctgataaccagtctcatttcaaaagttccaaga cagaaatgaaagatgtccataaaaatgtacagtctaaatgtagacgtgatgatcaaatcaggaatctttcgggaaacatt tcttcaggaatcctcggatcttttgacagaatgaattttcaattatttgtgtcggtgactcacgtactcattgtttatgc aattcttgtttttatcctcatatgttccacattctatttgcgatataaagttcatcatttggaagagcaacttgtattca tggcttctactgtggatccacatatgaatgaacatccaatacaaggtggtttgggatatcaccaaaaatttaatgttgac ggtctgtatgcagagctaacagctaatcttatcaaactggaaaagatacaaagcaatttacagaagctacttgaagacac caggcaaaccttacccttacgtggtcactctgaagatttaaatacagatggtaactgtggaaatttcttagaaactttca agttacttgccaaatatgacccagttgccaaacaacatcttcacagagtacaacgcacagatggttacattgtgtcctat ctctctccacagagccagaatgagtttattagcctgctcggcgatcacattcgaacaatcatctttcaaaatatcataaa ggccaagtattttgctataacgtttgatagcactcctgatatttcacacactgaccaaatatcccaagtgattcgatatg tgcatattgaagattcaggagtccatgtgacagagtctttcattgactttattcagttatatgggaaatcagctgatgtc attacaaaacaaatttgtgacaagttgcaagctgatggccttaaactagagcattgctacggccagggatacgacaatgc tgcgactatggctggacacattagtggtgtacaaaaacgtattttggatatgaatcccaaagcaatgtttgtgccatgta acaatcactcgctcgatcttgctgggatgcatgcagttggtgttgggacaaagtctgttactttctttggcactgtggaa aaggtgtattcatttttctcaagttccacccacaggtgggatatccttaagaaacatgtaccaattcgtgtaaagcgatc gtgtaacacaagatggagttcaacgcatgaagctgtatgcgtacttgctgaacacactgagaaaataatagacgctttgg aagcgttgagagatgggccggaagaaacctctgaaaccaggggtgatgcaggaagtcttttagtttgcataatgacatat gtttttttctctttcttgcatttttggaacccagtactaaccgaagtaaatgatactcagatctacctgcagcaagaagg acttgcgcttgatcaatgcgtgcaaaagttaaaagcattgactttattttgtcatgaaaaatgtgatagtctagtgtcaa aggcaactgagaaagctctgcaggtatgcaaaacctattgcatacctacagagagaagagttggaagacgcaagaagatg gatggtgagaacagttgcgatgctggcttgaccttaatacaggaaacaagcagagaacaactggaagcaattgatcagct tcaggcagaaattaaaaaacgtactacgcagatgaatacgctgcaccagcgatttgcttttttgcaaatccaaacattgt tggatactaaaaaagatgattttattaagaaacaaattcagcacacgtgtgctcagtacacggaattgaatgctgcatct atgctcaccgaaataactcgacttcggcaccacattatcttgtataaggaggtcaatcctgatgagcaggttgcaaactg atcagctttagatttgcttcgctgggtgtataagtggaagctgcaagaaagtttaactaactttgttgtcacattaagaa tctttcttactatcactgtttctacagcgagttgtgaaagaagtttctcaaaacttaaactaattaaaacatatcagaga tctacaatgagccaagaaagactgagtaatctagcaatactgtccattgagagagactttaatgtagatttcaattccgt tgttgaaaaatttgcgctaattaaaagcaggcgaatttaaattaatctgtatattatatacagattgatatcttgcactt ctattaaagaattacaattagaggtacaggattgaggaagttggctccatctagcccagtcttggatcatctccagggta tggttccattttgatgtttagtttttgttcttgatattttttgtcgtttacgatggttgtgagacgacatataatagcat ggcccatgctaggttactacatttgtagatttgtattcatagacctgctgaaaatgtggagaatgtgtaatgcatgttcg cactcaataaagtgtttgaaaataaacttgtat |
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Protein
| Protein ID | habu1_s85_g00485.t1 |
|---|---|
| Definition | - |
>habu1_s85_g00485.t1 MPPKNVAVFQGNLVRQGPRDLADHSWNHSVHKGIMIPPKNCSENENGTEEKKKSGKPGFGVPQISFNEADYFEDQKKVAI ARSKTIVDNSFLTIDGKNDSKAERKKHTSNQFKANAHFHKLFLDVPIDEPLRQNFTCALQKEIVYQGKLYVSENWICFNS KVFGKGTKISIPVLSVTLIKKTKTALLVPNALIITTVSDRHMFVSFLSRDTVYKLLKSICSHLEDGNSPNPSSLENSFRA DRPTTLPLDFNHDFSELDGIIQRRRQEMEESSSTGSQTPELEHLQDHHESDNQSHFKSSKTEMKDVHKNVQSKCRRDDQI RNLSGNISSGILGSFDRMNFQLFVSVTHVLIVYAILVFILICSTFYLRYKVHHLEEQLVFMASTVDPHMNEHPIQGGLGY HQKFNVDGLYAELTANLIKLEKIQSNLQKLLEDTRQTLPLRGHSEDLNTDGNCGNFLETFKLLAKYDPVAKQHLHRVQRT DGYIVSYLSPQSQNEFISLLGDHIRTIIFQNIIKAKYFAITFDSTPDISHTDQISQVIRYVHIEDSGVHVTESFIDFIQL YGKSADVITKQICDKLQADGLKLEHCYGQGYDNAATMAGHISGVQKRILDMNPKAMFVPCNNHSLDLAGMHAVGVGTKSV TFFGTVEKVYSFFSSSTHRWDILKKHVPIRVKRSCNTRWSSTHEAVCVLAEHTEKIIDALEALRDGPEETSETRGDAGSL LVCIMTYVFFSFLHFWNPVLTEVNDTQIYLQQEGLALDQCVQKLKALTLFCHEKCDSLVSKATEKALQVCKTYCIPTERR VGRRKKMDGENSCDAGLTLIQETSREQLEAIDQLQAEIKKRTTQMNTLHQRFAFLQIQTLLDTKKDDFIKKQIQHTCAQY TELNAASMLTEITRLRHHIILYKEVNPDEQVAN |
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| Protein ID | habu1_s85_g00485.t2 |
| Definition | - |
>habu1_s85_g00485.t2 MPPKNVAVFQGNLVRQGPRDLADHSWNHSPIDNAESVFISSENENGTEEKKKSGKPGFGVPQISFNEADYFEDQKKVAIA RSKTIVDNSFLTIDGKNDSKAERKKHTSNQFKANAHFHKLFLDVPIDEPLRQNFTCALQKEIVYQGKLYVSENWICFNSK VFGKGTKISIPVLSVTLIKKTKTALLVPNALIITTVSDRHMFVSFLSRDTVYKLLKSICSHLEDGNSPNPSSLENSFRAD RPTTLPLDFNHDFSELDGIIQRRRQEMEESSSTGSQTPELEHLQDHHESDNQSHFKSSKTEMKDVHKNVQSKCRRDDQIR NLSGNISSGILGSFDRMNFQLFVSVTHVLIVYAILVFILICSTFYLRYKVHHLEEQLVFMASTVDPHMNEHPIQGGLGYH QKFNVDGLYAELTANLIKLEKIQSNLQKLLEDTRQTLPLRGHSEDLNTDGNCGNFLETFKLLAKYDPVAKQHLHRVQRTD GYIVSYLSPQSQNEFISLLGDHIRTIIFQNIIKAKYFAITFDSTPDISHTDQISQVIRYVHIEDSGVHVTESFIDFIQLY GKSADVITKQICDKLQADGLKLEHCYGQGYDNAATMAGHISGVQKRILDMNPKAMFVPCNNHSLDLAGMHAVGVGTKSVT FFGTVEKVYSFFSSSTHRWDILKKHVPIRVKRSCNTRWSSTHEAVCVLAEHTEKIIDALEALRDGPEETSETRGDAGSLL VCIMTYVFFSFLHFWNPVLTEVNDTQIYLQQEGLALDQCVQKLKALTLFCHEKCDSLVSKATEKALQVCKTYCIPTERRV GRRKKMDGENSCDAGLTLIQETSREQLEAIDQLQAEIKKRTTQMNTLHQRFAFLQIQTLLDTKKDDFIKKQIQHTCAQYT ELNAASMLTEITRLRHHIILYKEVNPDEQVAN |
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| Protein ID | habu1_s85_g00485.t3 |
| Definition | - |
>habu1_s85_g00485.t3 MPGWPPWREAKILDLNEPDGDELKPVRVASKKEKAALIHSENENGTEEKKKSGKPGFGVPQISFNEADYFEDQKKVAIAR SKTIVDNSFLTIDGKNDSKAERKKHTSNQFKANAHFHKLFLDVPIDEPLRQNFTCALQKEIVYQGKLYVSENWICFNSKV FGKGTKISIPVLSVTLIKKTKTALLVPNALIITTVSDRHMFVSFLSRDTVYKLLKSICSHLEDGNSPNPSSLENSFRADR PTTLPLDFNHDFSELDGIIQRRRQEMEESSSTGSQTPELEHLQDHHESDNQSHFKSSKTEMKDVHKNVQSKCRRDDQIRN LSGNISSGILGSFDRMNFQLFVSVTHVLIVYAILVFILICSTFYLRYKVHHLEEQLVFMASTVDPHMNEHPIQGGLGYHQ KFNVDGLYAELTANLIKLEKIQSNLQKLLEDTRQTLPLRGHSEDLNTDGNCGNFLETFKLLAKYDPVAKQHLHRVQRTDG YIVSYLSPQSQNEFISLLGDHIRTIIFQNIIKAKYFAITFDSTPDISHTDQISQVIRYVHIEDSGVHVTESFIDFIQLYG KSADVITKQICDKLQADGLKLEHCYGQGYDNAATMAGHISGVQKRILDMNPKAMFVPCNNHSLDLAGMHAVGVGTKSVTF FGTVEKVYSFFSSSTHRWDILKKHVPIRVKRSCNTRWSSTHEAVCVLAEHTEKIIDALEALRDGPEETSETRGDAGSLLV CIMTYVFFSFLHFWNPVLTEVNDTQIYLQQEGLALDQCVQKLKALTLFCHEKCDSLVSKATEKALQVCKTYCIPTERRVG RRKKMDGENSCDAGLTLIQETSREQLEAIDQLQAEIKKRTTQMNTLHQRFAFLQIQTLLDTKKDDFIKKQIQHTCAQYTE LNAASMLTEITRLRHHIILYKEVNPDEQVAN |
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