Gene
| Gene Model ID | habu1_s878_g03101 |
|---|---|
| Locus | habu1_scaffold878 : 33326 ... 51374 : + |
| To GenomeBrowser | habu1_scaffold878:33326..51374 |
| Genes list of scaffold | habu1_scaffold878 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| myocardial zonula adherens partial | GO:0035556 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03101.t1 | 1 | 1 | GCOM2 | 96 | 418 | 0.0 | 197.5 | 0.0 | 0.0 | 197.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s878_g03101.t1 | gi|602666879|ref|XP_007439009.1| | PREDICTED: myocardial zonula adherens protein, partial [Python bivittatus] | 0.0 |
| habu1_s878_g03101.t1 | gi|697501668|ref|XP_009679738.1| | PREDICTED: myocardial zonula adherens protein-like isoform X1 [Struthio camelus australis] | 0.0 |
| habu1_s878_g03101.t1 | gi|704523721|ref|XP_010084031.1| | PREDICTED: myocardial zonula adherens protein-like, partial [Pterocles gutturalis] | 0.0 |
| habu1_s878_g03101.t1 | gi|701306147|ref|XP_010013827.1| | PREDICTED: myocardial zonula adherens protein-like, partial [Nestor notabilis] | 0.0 |
| habu1_s878_g03101.t1 | gi|637358873|ref|XP_008119795.1| | PREDICTED: GRINL1A combined protein [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 17.1 |
| Venom grand-1 | 32.8 |
| Pit, infrared sensing | 13.3 |
| Nose | 10.0 |
| Brain-1 | 1.7 |
| Eye | 7.2 |
| fetal fibroblast | 2.1 |
| venom gland-2 | 19.7 |
| Brain-2 | 1.4 |
| Spleen | 3.2 |
| Lung | 127.2 |
| Liver | 3.2 |
| Kidney | 5.4 |
| Pancreas | 4.4 |
| Small intestine | 40.2 |
| Large intestine | 50.7 |
| Stomach | 25.3 |
| heart | 4.8 |
| ovary | 35.9 |
| cheek muscle | 4.1 |
Transcript
| Transcript ID | habu1_s878_g03101.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03101.t1 gggcggggcggggcgagggcccttcctctggcgcgcggggcggcggagcggctcacttggcccggggaggcgccgcgccc ggcggtggcggaggctgcgggcaggcggcggcggcggcgggcgagatgctgcgctacagctcggggctgacggtgacccg cactacgccgaggcagccgcagagcagtcggaaggcaaacatctgtcggctgcgcttaactctgcccccggaagaaagct ggcctccttgggaaggaacagatactgccgaaaagaccccaaagcaactttaccaaacatctggcggattgtctgccggg gacttaaagcacggtgttgtgtatggtgtagtgcaccggtctgatgacaaccataacaaagaaatggtggtttatggatg gtcagctcaccaactgaaggaagaaatgagatacatacgagatgtgaggttaacattagaaagagtaagaaacaaaatgt gtggagaatacgatgaaatgaaacgcaaaatccagcagctctcaagtgagctggcggtatcgcatgctgagcaggcatcc ctggaaaaccacatccaggtccatgcagcagccctggagagtttccgcgaaatgagcagttcgctgacctcagcctccat tgaactgcagaaaaccttagttgatgttactttggagaatacagttatacgtgaccagatacagaacctgaaacaaactc acgaacagtccatggaaaaactgaaagaaaagcagaagcaactggaaacggctaaggtggaaaatgaattgctccgcctc aaggtggaaagctcacaggaagcaaatgcagaagtcatgagagagatgaccaggaaactatacagtcagtatgaagaaaa gcttcaagaagaagaacagaaacataaacttgagaaagaaaccctccttctggaaacgaatcgtttacttacggccattg aggatgccaataaggagatgagagttacagagacaagtttgcaggaaaaagaccagcgaattggagagctggaccgactc atccggcgcatggaagatgaacgccatcagttgcaagagcaattaatagagtatgaaatgcaactacaaggagcaggtgt ttacaaccagtccagccaaccaaggtctctcaagttggaggaaataactgacagtctccgagaacgaatccggcacctgg acgacatggttctgtgtcagcaaaagaaagtcaagcacatggttgaggagatagcgctacaaaagagaaagctgaaacaa aaggaaatctttatattacaacttttagagaaaatctcttttctagagggagagaacaaggaactgcaggaccgtttgga ttacctgaaggagacccaatccaggcctgaggtggacaccagagacattggggttggatgtgacctccctgccagccctg aaaacggaagccgactgcctcctgaggagctgaagccagccagaacctaccgcccattcctgcgggtcctggaatattct tccaagcaccatgttttgggcccagcagccccctgcgagtgaggctgtacccagccagctagctcgatgggcggagggga gcaagcagtgcagggcgccactgaggcccttgagcactgaggtcatcctggggactgggaggccaacagagctgctgctt cgggggaggaaggcagctctacacttcaggcagctgcacaagaggcttccatccgggaattctgggaaatggatccatgg tccaaacttcatccaagatggcatatcttcatgcttcgcttggaataatattcattatggtgactttgcttctggcagca gctacagtccaagagagattgccacgtactgtggatgtgcacctgtggctctgccatgctgacgatgctcctcaacccta atgcaggaagagggcacagtggcccagcaagagcaccctgccttcctctgggtgtgggtgtgggtgcataaaggtttggc ctctccagctttctgagctaagggcacattcatcatcaagtttatttccaggtgagaaatctcagcgctcctgagccgct ttgctcaggggatccttccacacctgcctttccactggatccaggacactctgcccgggtcttacgtgccagtatatgcc agttcttacatttctacttgtaaagttccaattcagatgtttaaatggctgcattgttttataaacccaagttttctaag catttctcccttaaggtcttttaaaggaatgtcctgtgtatagacacctgaataaagttgtcattctttgtggaactg |
|
Protein
| Protein ID | habu1_s878_g03101.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03101.t1 MLRYSSGLTVTRTTPRQPQSSRKANICRLRLTLPPEESWPPWEGTDTAEKTPKQLYQTSGGLSAGDLKHGVVYGVVHRSD DNHNKEMVVYGWSAHQLKEEMRYIRDVRLTLERVRNKMCGEYDEMKRKIQQLSSELAVSHAEQASLENHIQVHAAALESF REMSSSLTSASIELQKTLVDVTLENTVIRDQIQNLKQTHEQSMEKLKEKQKQLETAKVENELLRLKVESSQEANAEVMRE MTRKLYSQYEEKLQEEEQKHKLEKETLLLETNRLLTAIEDANKEMRVTETSLQEKDQRIGELDRLIRRMEDERHQLQEQL IEYEMQLQGAGVYNQSSQPRSLKLEEITDSLRERIRHLDDMVLCQQKKVKHMVEEIALQKRKLKQKEIFILQLLEKISFL EGENKELQDRLDYLKETQSRPEVDTRDIGVGCDLPASPENGSRLPPEELKPARTYRPFLRVLEYSSKHHVLGPAAPCE |
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