Gene
| Gene Model ID | habu1_s878_g03104 |
|---|---|
| Locus | habu1_scaffold878 : 67390 ... 97445 : - |
| To GenomeBrowser | habu1_scaffold878:67390..97445 |
| Genes list of scaffold | habu1_scaffold878 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| retinal dehydrogenase 2 isoform x1 | EC:1.2.1.36 GO:0001568 GO:0001758 GO:0001936 GO:0003007 GO:0004028 GO:0005737 GO:0008284 GO:0008285 GO:0009855 GO:0009952 GO:0009954 GO:0010628 GO:0014032 GO:0016331 GO:0021915 GO:0030182 GO:0030324 GO:0030900 GO:0030902 GO:0031016 GO:0031076 GO:0034097 GO:0035115 GO:0035799 GO:0042572 GO:0042574 GO:0042904 GO:0043065 GO:0048384 GO:0048566 GO:0048738 GO:0055114 GO:0060324 GO:0071300 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03104.t2 | 1 | 1 | Aldedh | 27 | 490 | 0.0 | 621.2 | 0.0 | 0.0 | 621.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.1 |
| Brain-1 | 0.7 |
| Eye | 0.4 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 0.6 |
| Brain-2 | 0.7 |
| Spleen | 0.4 |
| Lung | 0.6 |
| Liver | 0.9 |
| Kidney | 1.3 |
| Pancreas | 1.5 |
| Small intestine | 0.5 |
| Large intestine | 1.4 |
| Stomach | 0.2 |
| heart | 0.5 |
| ovary | 0.2 |
| cheek muscle | 3.6 |
Transcript
| Transcript ID | habu1_s878_g03104.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03104.t1 cagaattttgcacagccaccaactgcattgagagcgcagttgcaccctcggagaggttttctgggtctgacatcttgatg actttcctcccacacccgcaacgagtgcttaattagacggcttgtagggagccccttccccttctgcagcctctgcccgt ctccggctggctttcggctgcgctgcatggaagacccagccagataacggggacagaactggaaagagctggaagagata gaggcgggagacgcgatgacttcaagcaaaattgagatgcctgctggaatgaaggcggatccggcggctctgatggcttc tctgcacttgctgccttctcccaccctcaacctggaaattaagttcaccaaaatctttatcaacaacgagtggcaaaact ctgagagtgggaaaatattccctgtatttaatcctgcaacaggagaacagatctgtgacgtgcaagaagctgacaaggtt gacacagacaaggcggtgcaggctgctcggctggccttctccctgggctcggtgtggcggaggatggatgcctctgagcg aggacacctcttggaaaagctggccgatctggtggagagagaccgggccctccttgccaccatggagtcgctgaacagtg ggaagccattcctccaggccttctacgttgaccttcacggcgtgatcaagaccttgcgatattttgccggttgggcagac aagattcatggattgaccatcccagtggacggagattatttcacctttacgaggcatgagcccatcggcgtgtgtggaca gatcatcccgtggaacttccctctcctgatgtttgcgtggaagattgcaccggccctttgctgcggcaacaccgtggtcc tcaagccggctgagcaaaccccgctcaccgccctccacctgggtgccctcatcaaggaggcggggtttcctccaggtgtg gtcaacattttgcccggatttggacccactgtgggggcggcaattgcttcgcacacagggattgataaaatcgccttcac aggttccacagaggttggaaagctggttcaagaagcagccggcaggagcaacttgaagcgggtgacgctggaactcgggg ggaagagccccaacattatctttgcggacgcagattgccagtgctgcacggccggctcccgcatctacgtggaggagacc atctacgaggagttcgtccggaggagcgtggaacgggccaagagaagagttgtgggcagcccccttgaccccaccaccga gcaaggaccacagattgacaagaagcagtacaacaaggtcctggagctgatccagagtggtgtggctgaaggggccaggc tggagtgcgggggcaaaggattggggcgcaagggcttcttcatcgaacccaccgttttctccaacgtgactgatgatatg cgtatcgccagggaagagatatttgggcctgtgcaagaaatcctgcagttcaaaaccatggaggaagtgatcgagagagc caacaattccgacttcgggctggtggccgctgtcttcaccagcgacatcaacaaggcgttgactgtctcctctgccatgc aggcaggaaccgtctgggtcaactgctacaatgccttaaatgcccagagtcctttcggaggtttcaagatgtccggcaac ggaagagaaatgggagaatgtggcttgcgagaatactccgaaataaagacagtgaccataaagattcctcagaagaactc ctaagaggaggaggctccacagcaccagacgcgcctctatctttctctagagggactgagcactcaggaatttttaaaaa gtgacactgatatttgtttttttttaaaagtaacatcacaaccaggttcattattcaacttgaggagttcttctccactg ctgacaccgcactcttttgatcttgcgcaagatttctctcaaaagagaaatcttttgaagcatgtttgagctggatggcc gattcccatgctgagagacacaggcacactgtcttcttggccggacaagaagggctgtgctgagaggacttttgcagggg aggagcaggcaggagacagcccctggctgggacagccgctctgctctctgggcaacccagccaggcaggcctggagcatc ttgtgggcatccgtcccgctgcctgtgccattgccttgggaggctctcctagctctcctcagggggaaggaacaggcagt ttggccaggtggtgttcctggagggccttggctcctcctattctctctccttcccccgtggatcactaagaggcagccct tctcagcagccctcactgctgcttcatgaaatgggcttcctggcgcctccatttattccccttgtctgactgcagaaggc cctttgggggtggggtggggagatgctttccttccctatgcaggggcctcagaattcccaaagtccccatcatccaggtg gttcttccctcgcccaggcatcggactccagctcctctgatgattttgccccccccccgtgccaacctggccctctttga agtggctttgaagtagtgaccaaacagatgtccctcccaccactggcaaaggttttgaggagaaccctccccccaaaaaa cctctgctgacctacagcctcaggaggctggatttaagactggaagccgtaggtcggcagatggagccgagttaccgccg tcgatgggtcccattcctgccatcagcaggaaccatcctcctcggctgctttctgcttgaaatgatttcaggcagcaact tttgttccgaagagggagccctcaactcactcaatggctccctggaacaccctccccccagttctggctggggagctggg agcccctgaaaacagcacggccgcagcaccacgctcagccagatctggctaggcttccccaggagctgagccaaaaccca gagtgcctcccagggcatcaggggcccaaaggctgaagtggctcttgggctgcatttgacctgttgggaggacagctgtg tgtactcagctgcattcggtgaatggatctccaaaatgattgtgtgtcagaaacactccgcttttcttccgtgtcaggca gcgctcaagactggcttcaggcagcacaggggtctccgtggcataaaacagatggctcccccccccacaccatgtggccc agagtagcaggcgttttctacgcaagcctcattgcacacaatgggcgtgcatgcagaaagacctgtgctagcaataagca tttatactatatactctacaatatatgtgtggtgtcagtgtgtgtaattccaaataaacaattattgttaggtaacaaac |
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| Transcript ID | habu1_s878_g03104.t2 |
| Definition | - |
>habu1_s878_g03104.t2 cagaattttgcacagccaccaactgcattgagagcgcagttgcaccctcggagaggttttctgggtctgacatcttgatg actttcctcccacacccgcaacgagtgcttaattagacggcttgtagggagccccttccccttctgcagcctctgcccgt ctccggctggctttcggctgcgctgcatggaagacccagccagataacggggacagaactggaaagagctggaagagata gaggcgggagacgcgatgacttcaagcaaaattgagatgcctgctggaatgaaggcggatccggcggctctgatggcttc tctgcacttgctgccttctcccaccctcaacctggaaattaagttcaccaaaatctttatcaacaacgagtggcaaaact ctgagagtgggaaaatattccctgtatttaatcctgcaacaggagaacagatctgtgacgtgcaagaagctgacaaggtt gacacagacaaggcggtgcaggctgctcggctggccttctccctgggctcggtgtggcggaggatggatgcctctgagcg aggacacctcttggaaaagctggccgatctggtggagagagaccgggccctccttgccaccatggagtcgctgaacagtg ggaagccattcctccaggccttctacgttgaccttcacggcgtgatcaagaccttgcgatattttgccggttgggcagac aagattcatggattgaccatcccagtggacggagattatttcacctttacgaggcatgagcccatcggcgtgtgtggaca gatcatcccgtggaacttccctctcctgatgtttgcgtggaagattgcaccggccctttgctgcggcaacaccgtggtcc tcaagccggctgagcaaaccccgctcaccgccctccacctgggtgccctcatcaaggaggcggggtttcctccaggtgtg gtcaacattttgcccggatttggacccactgtgggggcggcaattgcttcgcacacagggattgataaaatcgccttcac aggttccacagaggttggaaagctggttcaagaagcagccggcaggagcaacttgaagcgggtgacgctggaactcgggg ggaagagccccaacattatctttgcggacgcagatttggagcacgcagtggagcaggcccaccagggggtctttttcaac caaggccagtgctgcacggccggctcccgcatctacgtggaggagaccatctacgaggagttcgtccggaggagcgtgga acgggccaagagaagagttgtgggcagcccccttgaccccaccaccgagcaaggaccacagattgacaagaagcagtaca acaaggtcctggagctgatccagagtggtgtggctgaaggggccaggctggagtgcgggggcaaaggattggggcgcaag ggcttcttcatcgaacccaccgttttctccaacgtgactgatgatatgcgtatcgccagggaagagatatttgggcctgt gcaagaaatcctgcagttcaaaaccatggaggaagtgatcgagagagccaacaattccgacttcgggctggtggccgctg tcttcaccagcgacatcaacaaggcgttgactgtctcctctgccatgcaggcaggaaccgtctgggtcaactgctacaat gccttaaatgcccagagtcctttcggaggtttcaagatgtccggcaacggaagagaaatgggagaatgtggcttgcgaga atactccgaaataaagacagtgaccataaagattcctcagaagaactcctaagaggaggaggctccacagcaccagacgc gcctctatctttctctagagggactgagcactcaggaatttttaaaaagtgacactgatatttgtttttttttaaaagta acatcacaaccaggttcattattcaacttgaggagttcttctccactgctgacaccgcactcttttgatcttgcgcaaga tttctctcaaaagagaaatcttttgaagcatgtttgagctggatggccgattcccatgctgagagacacaggcacactgt cttcttggccggacaagaagggctgtgctgagaggacttttgcaggggaggagcaggcaggagacagcccctggctggga cagccgctctgctctctgggcaacccagccaggcaggcctggagcatcttgtgggcatccgtcccgctgcctgtgccatt gccttgggaggctctcctagctctcctcagggggaaggaacaggcagtttggccaggtggtgttcctggagggccttggc tcctcctattctctctccttcccccgtggatcactaagaggcagcccttctcagcagccctcactgctgcttcatgaaat gggcttcctggcgcctccatttattccccttgtctgactgcagaaggccctttgggggtggggtggggagatgctttcct tccctatgcaggggcctcagaattcccaaagtccccatcatccaggtggttcttccctcgcccaggcatcggactccagc tcctctgatgattttgccccccccccgtgccaacctggccctctttgaagtggctttgaagtagtgaccaaacagatgtc cctcccaccactggcaaaggttttgaggagaaccctccccccaaaaaacctctgctgacctacagcctcaggaggctgga tttaagactggaagccgtaggtcggcagatggagccgagttaccgccgtcgatgggtcccattcctgccatcagcaggaa ccatcctcctcggctgctttctgcttgaaatgatttcaggcagcaacttttgttccgaagagggagccctcaactcactc aatggctccctggaacaccctccccccagttctggctggggagctgggagcccctgaaaacagcacggccgcagcaccac gctcagccagatctggctaggcttccccaggagctgagccaaaacccagagtgcctcccagggcatcaggggcccaaagg ctgaagtggctcttgggctgcatttgacctgttgggaggacagctgtgtgtactcagctgcattcggtgaatggatctcc aaaatgattgtgtgtcagaaacactccgcttttcttccgtgtcaggcagcgctcaagactggcttcaggcagcacagggg tctccgtggcataaaacagatggctcccccccccacaccatgtggcccagagtagcaggcgttttctacgcaagcctcat tgcacacaatgggcgtgcatgcagaaagacctgtgctagcaataagcatttatactatatactctacaatatatgtgtgg tgtcagtgtgtgtaattccaaataaacaattattgttaggtaacaaac |
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Protein
| Protein ID | habu1_s878_g03104.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03104.t1 MASLHLLPSPTLNLEIKFTKIFINNEWQNSESGKIFPVFNPATGEQICDVQEADKVDTDKAVQAARLAFSLGSVWRRMDA SERGHLLEKLADLVERDRALLATMESLNSGKPFLQAFYVDLHGVIKTLRYFAGWADKIHGLTIPVDGDYFTFTRHEPIGV CGQIIPWNFPLLMFAWKIAPALCCGNTVVLKPAEQTPLTALHLGALIKEAGFPPGVVNILPGFGPTVGAAIASHTGIDKI AFTGSTEVGKLVQEAAGRSNLKRVTLELGGKSPNIIFADADCQCCTAGSRIYVEETIYEEFVRRSVERAKRRVVGSPLDP TTEQGPQIDKKQYNKVLELIQSGVAEGARLECGGKGLGRKGFFIEPTVFSNVTDDMRIAREEIFGPVQEILQFKTMEEVI ERANNSDFGLVAAVFTSDINKALTVSSAMQAGTVWVNCYNALNAQSPFGGFKMSGNGREMGECGLREYSEIKTVTIKIPQ KNS |
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| Protein ID | habu1_s878_g03104.t2 |
| Definition | - |
>habu1_s878_g03104.t2 MASLHLLPSPTLNLEIKFTKIFINNEWQNSESGKIFPVFNPATGEQICDVQEADKVDTDKAVQAARLAFSLGSVWRRMDA SERGHLLEKLADLVERDRALLATMESLNSGKPFLQAFYVDLHGVIKTLRYFAGWADKIHGLTIPVDGDYFTFTRHEPIGV CGQIIPWNFPLLMFAWKIAPALCCGNTVVLKPAEQTPLTALHLGALIKEAGFPPGVVNILPGFGPTVGAAIASHTGIDKI AFTGSTEVGKLVQEAAGRSNLKRVTLELGGKSPNIIFADADLEHAVEQAHQGVFFNQGQCCTAGSRIYVEETIYEEFVRR SVERAKRRVVGSPLDPTTEQGPQIDKKQYNKVLELIQSGVAEGARLECGGKGLGRKGFFIEPTVFSNVTDDMRIAREEIF GPVQEILQFKTMEEVIERANNSDFGLVAAVFTSDINKALTVSSAMQAGTVWVNCYNALNAQSPFGGFKMSGNGREMGECG LREYSEIKTVTIKIPQKNS |
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