Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s878_g03105
Locus habu1_scaffold878 : 102876 ... 112257 : +
To GenomeBrowser habu1_scaffold878:102876..112257
Genes list of scaffold habu1_scaffold878

Annotation by Blast2GO
Annotation GO
aquaporin-9 isoform x1 GO:0005215 GO:0006810 GO:0016021

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s878_g03105.t1 1 1 MIP 17 259 0.0 175.5 0.0 0.0 175.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s878_g03105.t1 gi|602666873|ref|XP_007439006.1| PREDICTED: aquaporin-9 isoform X1 [Python bivittatus] 0.0
habu1_s878_g03105.t1 gi|699668124|ref|XP_009884045.1| PREDICTED: aquaporin-9 isoform X1 [Charadrius vociferus] 0.0
habu1_s878_g03105.t1 gi|529421619|ref|XP_005230665.1| PREDICTED: aquaporin-9 isoform X1 [Falco peregrinus] 0.0
habu1_s878_g03105.t1 gi|704300285|ref|XP_010162647.1| PREDICTED: aquaporin-9 isoform X1 [Caprimulgus carolinensis] 0.0
habu1_s878_g03105.t1 gi|557293366|ref|XP_006029165.1| PREDICTED: aquaporin-9 [Alligator sinensis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 2.6
Venom grand-1 0.4
Pit, infrared sensing 80.5
Nose 22.8
Brain-1 0.6
Eye 29.7
fetal fibroblast 0.0
venom gland-2 1.2
Brain-2 0.5
Spleen 0.8
Lung 9.8
Liver 403.8
Kidney 0.3
Pancreas 1.0
Small intestine 0.2
Large intestine 0.5
Stomach 0.4
heart 0.3
ovary 0.0
cheek muscle 3.7

Transcript
Transcript IDhabu1_s878_g03105.t1
Definition-
>habu1_s878_g03105.t1
ggatggggtctcttgaagagtgatccaggaaggcaaagggaggcccagagacccccaggctggtcggggcattgtgagaa
ccgcagctgtggggctctctgccttccttggatgaggagtgggctgaagctcaagagagcaagagggacacacatttgac
cgcacattttccaagtcagaacaaagaagaggaggagacgtcaggatgacaaagaaagcaggaaagagcctgaaagaaaa
aatggccctgaagaaccacctgctgaaggaagtgctggccgaactcctggggaccttcattttggttgccctgggctgtg
gctgcgtggcacaaacggtcctgagcagaggggccctgggaggagccctgatgatctctgttggcttcgccatggccgta
acccttgccatctacgtggctgggggcatctctgggggtcacatcaatccagccgtctccttcgccatgtgcctgactgg
gaagatgaaatgggccaaattccccgtttacgtcctggcacaatatctgggcgcctttctcggagccgttgcggtctttg
gcatcaactacgacgcactcatgttctacaccaatggcaccttcgctgtcaaaggacccaacgccacagcgcacattttt
gcaacataccctcaggaatatttgtccctgaccaatggctttgcagaccagatgatgtccacggcctttcttatcctggg
ggtcttcgccatcttcgacacggacaacttgggggtcccgaaggggctggagcccatcgccatcggcctcctcatcatac
tgctgacctcttccatggccctgaacagcggctgcgccatgaatcctgcccgagatctggggccccgcctcttcacctac
ctggcggggtgggggggcgaagtcttcacagccggccataactggtggtgggtccccattgccggccccatggttggggc
agccctgggagctgcgacctacatgctgttcatcgaggtccaccacttccccctctccccctgccagaagatggacacgg
gcgccctacatgaacatgaactgacccacctggaggaggggaagtagggcccaataaagccctctgccccaccccctcga

Protein
Protein IDhabu1_s878_g03105.t1
Definition-
>habu1_s878_g03105.t1
MTKKAGKSLKEKMALKNHLLKEVLAELLGTFILVALGCGCVAQTVLSRGALGGALMISVGFAMAVTLAIYVAGGISGGHI
NPAVSFAMCLTGKMKWAKFPVYVLAQYLGAFLGAVAVFGINYDALMFYTNGTFAVKGPNATAHIFATYPQEYLSLTNGFA
DQMMSTAFLILGVFAIFDTDNLGVPKGLEPIAIGLLIILLTSSMALNSGCAMNPARDLGPRLFTYLAGWGGEVFTAGHNW
WWVPIAGPMVGAALGAATYMLFIEVHHFPLSPCQKMDTGALHEHELTHLEEGK

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