Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s878_g03106
Locus habu1_scaffold878 : 120276 ... 132617 : +
To GenomeBrowser habu1_scaffold878:120276..132617
Genes list of scaffold habu1_scaffold878

Annotation by Blast2GO
Annotation GO
hepatic triacylglycerol lipase EC:3.1.1.3 GO:0004806 GO:0005615 GO:0006633 GO:0008203 GO:0019433 GO:0030301 GO:0034372 GO:0034374 GO:0034375 GO:0042632 GO:0070328

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s878_g03106.t1 1 1 Lipase 38 345 0.0 351.4 0.0 0.0 351.0
habu1_s878_g03106.t1 1 1 PLAT 350 482 6.7e-17 61.8 2.9e-20 1.1e-16 61.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s878_g03106.t1 gi|591363141|ref|XP_007056475.1| PREDICTED: hepatic triacylglycerol lipase [Chelonia mydas] 0.0
habu1_s878_g03106.t1 gi|558113539|ref|XP_006112524.1| PREDICTED: hepatic triacylglycerol lipase isoform X1 [Pelodiscus sinensis] 0.0
habu1_s878_g03106.t1 gi|327286827|ref|XP_003228131.1| PREDICTED: LOW QUALITY PROTEIN: hepatic triacylglycerol lipase [Anolis carolinensis] 0.0
habu1_s878_g03106.t1 gi|557270037|ref|XP_006020309.1| PREDICTED: hepatic triacylglycerol lipase [Alligator sinensis] 0.0
habu1_s878_g03106.t1 gi|697501701|ref|XP_009679749.1| PREDICTED: hepatic triacylglycerol lipase [Struthio camelus australis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.1
Eye 0.1
fetal fibroblast 0.1
venom gland-2 0.0
Brain-2 0.1
Spleen 6.2
Lung 0.8
Liver 352.3
Kidney 0.1
Pancreas 8.0
Small intestine 0.2
Large intestine 0.2
Stomach 2.3
heart 0.0
ovary 4.3
cheek muscle 0.4

Transcript
Transcript IDhabu1_s878_g03106.t1
Definition-
>habu1_s878_g03106.t1
gacttatgaccggtttagtcctcgacttacaaccggttgggggtcgcagcattaaaaaggacaagaggacccgttctgcc
cttccatcccttcaccaccgggaatcagcgtggcccggcgggtgtcaggcaaaggggaatgagaagccatctggctcttc
cgctgctgctcttccttctctgcgcgcttcttgccgaagggaaccccaatggcggaaggaagaaaggctctcgtcggctg
cctcccgagaggagaggccctccccacttccaggccaagttcctgctgtattccaacagggtggagcaaggctgcctgat
ggagccaggccaggaggaggcgctccagcggtgtcccttcaacgcctccgtcccgctggtgatgatcatccatgggtggt
cggtggacaggcgactcgaaggatggatttggaaactgtccgaagagctcaaaacccaactgccttacaccaatgtcatc
atcgccgattggctctctcttgcacacgcacattaccccattgcagtccagaacacacgcgacattggccaagagatcgc
tcgcttcctggaatggctggaggaatccatgcagtttcaccggagcaatgctcacctggtggggtacagcctgggggccc
acgtagccggttttgctggcagctccatgagaggcaacgggaagattggcaggatcactggcctggaccctgctggaccc
ctctttgaaggcatgtcccccacggaccgtctatcgccagatgatgccaactttgtggatgccatccacacctttaccca
acagcacatgggcctcagtgtgggcatcaagcagcctgtggcgcactttgacttctaccccaacgggggaacttttcagc
ctggctgccacatcatgcatgtttataaccacattgtgcagtacggaatcacagggctgacccagacggtgaaatgtgcc
cacgagaggtcagttcatctctttattgactccctgcggtacagccagaagcagatcaccggctattggtgcaaaaacat
gcagatgtttgacaagggacgctgccttgactgccgggccaaccggtgcaacaccctgggctatcacattcggaaggcca
gggtcccgggcagccagaggctcttcctgaagacccaacctcagatgccattcaaagtttatcactatcagtttaaaatc
catttcatccacgaattccaagaaccacgaattgatccaacattcaccatctcgctgacaggcaacaaagacgacgtaga
aaatctctccatcactttaattgaaggcatcactcagaataaaacctacacttttcttgttcctctggatattgatattg
gagagctgatgatgatcaaactgaaatgggaaggaacggccatctgggaaaacatttgggacactgtccaaaccatcatc
ccttggagaaagggggaccgtcggccaggactcatcgtgacgtccattcgggttaaggcaggagaaactcagcagaaaat
gacattctgttctcagcgtgtggataatttgcacctctatccaggtcacgagaaaatgtttgtgagatgcgaagtcagtt
cccaaaaactgaaatgaaagtatggatgataagcaaatgtttcaaaaagctggtccagaagggaggcgactcagctttat
cttttccttagaaaaagaaaagaaaaaaggaacactttttttttgcacaaacacaccaatgtgaaacctaaaaaatgtga
tggatcaggatgtactgtaaattgttacgctcaagactagattgagtaaacaaataaagtgaattaaaaagtgaaattaa

Protein
Protein IDhabu1_s878_g03106.t1
Definition-
>habu1_s878_g03106.t1
MRSHLALPLLLFLLCALLAEGNPNGGRKKGSRRLPPERRGPPHFQAKFLLYSNRVEQGCLMEPGQEEALQRCPFNASVPL
VMIIHGWSVDRRLEGWIWKLSEELKTQLPYTNVIIADWLSLAHAHYPIAVQNTRDIGQEIARFLEWLEESMQFHRSNAHL
VGYSLGAHVAGFAGSSMRGNGKIGRITGLDPAGPLFEGMSPTDRLSPDDANFVDAIHTFTQQHMGLSVGIKQPVAHFDFY
PNGGTFQPGCHIMHVYNHIVQYGITGLTQTVKCAHERSVHLFIDSLRYSQKQITGYWCKNMQMFDKGRCLDCRANRCNTL
GYHIRKARVPGSQRLFLKTQPQMPFKVYHYQFKIHFIHEFQEPRIDPTFTISLTGNKDDVENLSITLIEGITQNKTYTFL
VPLDIDIGELMMIKLKWEGTAIWENIWDTVQTIIPWRKGDRRPGLIVTSIRVKAGETQQKMTFCSQRVDNLHLYPGHEKM
FVRCEVSSQKLK

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