Gene
| Gene Model ID | habu1_s878_g03110 |
|---|---|
| Locus | habu1_scaffold878 : 193636 ... 205987 : + |
| To GenomeBrowser | habu1_scaffold878:193636..205987 |
| Genes list of scaffold | habu1_scaffold878 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| e3 ubiquitin-protein ligase arkadia isoform x3 | GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03110.t2 | 1 | 1 | RNF111_N | 1 | 237 | 0.0 | 268.2 | 0.0 | 0.0 | 268.2 |
| habu1_s878_g03110.t2 | 1 | 1 | zf-C3HC4_3 | 558 | 606 | 1.3e-08 | 34.4 | 2.1e-11 | 2.9e-08 | 33.2 |
| habu1_s878_g03110.t2 | 1 | 1 | zf-rbx1 | 558 | 602 | 6.6e-07 | 29.3 | 1.3e-09 | 1.8e-06 | 27.9 |
| habu1_s878_g03110.t2 | 1 | 1 | zf-RING_2 | 560 | 602 | 4.0e-15 | 55.3 | 3.0e-18 | 4.0e-15 | 55.3 |
| habu1_s878_g03110.t2 | 1 | 1 | zf-RING_5 | 560 | 602 | 9.4e-07 | 28.4 | 2.0e-09 | 2.7e-06 | 26.9 |
| habu1_s878_g03110.t2 | 1 | 1 | zf-C3HC4_2 | 561 | 601 | 1.1e-07 | 31.7 | 8.3e-11 | 1.1e-07 | 31.7 |
| habu1_s878_g03110.t2 | 1 | 1 | zf-C3HC4 | 561 | 601 | 8.4e-07 | 28.5 | 6.2e-10 | 8.4e-07 | 28.5 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.2 |
| Venom grand-1 | 4.9 |
| Pit, infrared sensing | 5.0 |
| Nose | 6.0 |
| Brain-1 | 3.7 |
| Eye | 4.5 |
| fetal fibroblast | 7.4 |
| venom gland-2 | 5.0 |
| Brain-2 | 3.6 |
| Spleen | 4.0 |
| Lung | 6.3 |
| Liver | 5.8 |
| Kidney | 5.3 |
| Pancreas | 4.5 |
| Small intestine | 4.6 |
| Large intestine | 4.1 |
| Stomach | 4.1 |
| heart | 3.4 |
| ovary | 46.4 |
| cheek muscle | 4.5 |
Transcript
| Transcript ID | habu1_s878_g03110.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03110.t1 gacgtttcttctggtgcaccaaagagccagggaaacctgaaggggatcctcttgaaccctccaccctccgaggcggccaa aaacttccccggggaagaagttgagatgattgccagcaaagtgggggacgaattctcccacctctgtgaggacacccaga agcagaaggacctgaacggaagtcgtcccacgcaagaagccattgttgtgagtaagaaacgcaagagccagcaggctggc ccttcctatgctccgaactgtgggggcaaagagacaccccccattttagggactaggcggcaccttgaaacacaaagcga ggacgactcttcttttagcgactgtgcctcttcgccttcatccagcttgcattttggagactcggacacagaaacttcag acgaggacaaggaggcggctcccatgcggcaggctcgggctgtcttcaatgcctccagtagaatccacagttctcggcca caaaagtggccccggacagaggcggactccgtctcagggatattactgaaaaggccctgtttccacaacagtagttctcg gagaagacttccctataggaaacggtttgtgaaaactagctctgcgcaacgaacacagaaccaaaaagagcggattttaa tgcagcggaaaaaaagggaagtcttagctcggcagaagtatgctttactgcccagctccagcagcaccactgagaacgac ctcagcagcgcctcctcgtccagttcctccaccgaaggagaggaggagctctttgtgtcagctggggagaaccaccaaac cagcactgcggttccctcagggagccttgatgaagatgttgtggtgatcgaagcgtcttcaactccccaagtaactgcca atgaagaaatcaatgttacctcaacagacagtgaagtagagattgtcactgtgggagagagctaccgatctcgatcctcg cttgggcactctagagcccactggggccacagctcgggttcccatgttgcacggtcagcagagcagcgaaaccgcagccg agtctccacggtcatccagcccttgagacagaatgcagcggaagtcgtggacctcacggtggatgaagacgacccagcag tggtgccaaccacctcctccagagtgaatgttcaggctgccagtgctgcttctgagagcagcccccccgccccctcctca gagcaggtccccggaggagcctcgagcatctccagcagccagccctcctcgcaaccggagctctcggctctcctgtccaa cagcagcagcgcggctggtatctccacaagaggcgagcacacgagcggccacccccacatcctcaccggatgcatcccaa ctacggccacggccaccacattcacgtgccacagaccatgtcttcgcaccctcgacaagcgccggagaggtcggcttggc aaaggcaaacacattaccccaaggcagctgaatcccacattaaaactgttcaagacggaagtggcctctagcagccagtt gaatgattcgttgaaggttcctgacatggcgggctaccctcacatccgttacatttcatcgggattggatggaacttcat tcagaggccctttcaggggcaattttgaggaattaatccatctggaagaacgtttaggaaatgtgaatcgcggagcttcc caaggaaccattgaaagatgcacttatccccacaagtataaaaaggtaacaactgattggttctcacagaggaaactaca ctgcaaacatgatggggaagaaggaactgaggaagacaccgaggaaaagtgtaccatatgtttatctatattagaggaag gggaagatgtcagacgccttccgtgtatgcatctcttccatcaagtgtgtgttgaccagtggttaattacaaacaagaag tgccccatttgcagagtggacattgaagctcagctgcccagcgaaagttgacaggctttggcctccaacttcttgctttc ctccttcacacccatatccttctgggtactgcagtcaaccaaagatggcatgacttagctgtgcagttgtgggaagcatt tgaacctgctagagtgccgtttgtctgctctgtggtatacctaatgctaaccctacagttagtgtatttataaagcttat ttttggttggtttgtt |
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| Transcript ID | habu1_s878_g03110.t2 |
| Definition | - |
>habu1_s878_g03110.t2 gacgtttcttctggtgcaccaaagagccagggaaacctgaaggggatcctcttgaaccctccaccctccgaggcggccaa aaacttccccggggaagaagttgagatgattgccagcaaagtgggggacgaattctcccacctctgtgaggacacccaga agcagaaggacctgaacggaagtcgtcccacgcaagaagccattgttgtgagtaagaaacgcaagagccagcaggctggc ccttcctatgctccgaactgtgggggcaaagagacaccccccattttagggactaggcggcaccttgaaacacaaagcga ggacgactcttcttttagcgactgtgcctcttcgccttcatccagcttgcattttggagactcggacacagaaacttcag acgaggacaaggaggcggctcccatgcggcaggctcgggctgtcttcaatgcctccagtagaatccacagttctcggcca caaaagtggccccggacagaggcggactccgtctcagggatattactgaaaaggccctgtttccacaacagtagttctcg gagaagacttccctataggaaacggtttgtgaaaactagctctgcgcaacgaacacagaaccaaaaagagcggattttaa tgcagcggaaaaaaagggaagtcttagctcggcagaagtatgctttactgcccagctccagcagcaccactgagaacgac ctcagcagcgcctcctcgtccagttcctccaccgaaggagaggaggagctctttgtgtcagctggggagaaccaccaaac cagcactgcggttccctcagggagccttgatgaagatgttgtggtgatcgaagcgtcttcaactccccaagtaactgcca atgaagaaatcaatgttacctcaacagacagtgaagtagagattgtcactgtgggagagagctaccgatctcgatcctcg cttgggcactctagagcccactggggccacagctcgggttcccatgttgcacggtcagcagagcagcgaaaccgcagccg agtctccacggtcatccagcccttgagacagaatgcagcggaagtcgtggacctcacggtggatgaagacgacccagcag tggtgccaaccacctcctccagagtgaatgttcaggctgccagtgctgcttctgagagcagcccccccgccccctcctca gagcaggtccccggaggagcctcgagcatctccagcagccagccctcctcgcaaccggagctctcggctctcctgtccaa cagcagcagcgcggctggtatctccacaagaggcgagcacacgagcggccacccccacatcctcaccggatgcatcccaa ctacggccacggccaccacattcacgtgccacagaccatgtcttcgcaccctcgacaagcgccggagaggtcggcttggc aaaggcaaacacattaccccaaggcagctgaatcccacattaaaactgttcaagacggaagtggcctctagcagccagtt gaatgattcgttgaaggttcctgacatggcgggctaccctcacatccgttacatttcatcgggattggatggaacttcat tcagaggccctttcaggggcaattttgaggaattaatccatctggaagaacgtttaggaaatgtgaatcgcggagcttcc caaggaaccattgaaagatgcacttatccccacaagtataaaaagaggaaactacactgcaaacatgatggggaagaagg aactgaggaagacaccgaggaaaagtgtaccatatgtttatctatattagaggaaggggaagatgtcagacgccttccgt gtatgcatctcttccatcaagtgtgtgttgaccagtggttaattacaaacaagaagtgccccatttgcagagtggacatt gaagctcagctgcccagcgaaagttgacaggctttggcctccaacttcttgctttcctccttcacacccatatccttctg ggtactgcagtcaaccaaagatggcatgacttagctgtgcagttgtgggaagcatttgaacctgctagagtgccgtttgt ctgctctgtggtatacctaatgctaaccctacagttagtgtatttataaagcttatttttggttggtttgtt |
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Protein
| Protein ID | habu1_s878_g03110.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03110.t1 MIASKVGDEFSHLCEDTQKQKDLNGSRPTQEAIVVSKKRKSQQAGPSYAPNCGGKETPPILGTRRHLETQSEDDSSFSDC ASSPSSSLHFGDSDTETSDEDKEAAPMRQARAVFNASSRIHSSRPQKWPRTEADSVSGILLKRPCFHNSSSRRRLPYRKR FVKTSSAQRTQNQKERILMQRKKREVLARQKYALLPSSSSTTENDLSSASSSSSSTEGEEELFVSAGENHQTSTAVPSGS LDEDVVVIEASSTPQVTANEEINVTSTDSEVEIVTVGESYRSRSSLGHSRAHWGHSSGSHVARSAEQRNRSRVSTVIQPL RQNAAEVVDLTVDEDDPAVVPTTSSRVNVQAASAASESSPPAPSSEQVPGGASSISSSQPSSQPELSALLSNSSSAAGIS TRGEHTSGHPHILTGCIPTTATATTFTCHRPCLRTLDKRRRGRLGKGKHITPRQLNPTLKLFKTEVASSSQLNDSLKVPD MAGYPHIRYISSGLDGTSFRGPFRGNFEELIHLEERLGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKHDGEEG TEEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQLPSES |
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| Protein ID | habu1_s878_g03110.t2 |
| Definition | - |
>habu1_s878_g03110.t2 MIASKVGDEFSHLCEDTQKQKDLNGSRPTQEAIVVSKKRKSQQAGPSYAPNCGGKETPPILGTRRHLETQSEDDSSFSDC ASSPSSSLHFGDSDTETSDEDKEAAPMRQARAVFNASSRIHSSRPQKWPRTEADSVSGILLKRPCFHNSSSRRRLPYRKR FVKTSSAQRTQNQKERILMQRKKREVLARQKYALLPSSSSTTENDLSSASSSSSSTEGEEELFVSAGENHQTSTAVPSGS LDEDVVVIEASSTPQVTANEEINVTSTDSEVEIVTVGESYRSRSSLGHSRAHWGHSSGSHVARSAEQRNRSRVSTVIQPL RQNAAEVVDLTVDEDDPAVVPTTSSRVNVQAASAASESSPPAPSSEQVPGGASSISSSQPSSQPELSALLSNSSSAAGIS TRGEHTSGHPHILTGCIPTTATATTFTCHRPCLRTLDKRRRGRLGKGKHITPRQLNPTLKLFKTEVASSSQLNDSLKVPD MAGYPHIRYISSGLDGTSFRGPFRGNFEELIHLEERLGNVNRGASQGTIERCTYPHKYKKRKLHCKHDGEEGTEEDTEEK CTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQLPSES |
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