Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s878_g03112
Locus habu1_scaffold878 : 245236 ... 256812 : +
To GenomeBrowser habu1_scaffold878:245236..256812
Genes list of scaffold habu1_scaffold878

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s878_g03112.t1 gi|602635202|ref|XP_007424469.1| PREDICTED: protein FAM81A [Python bivittatus] 0.0
habu1_s878_g03112.t1 gi|558143217|ref|XP_006118963.1| PREDICTED: protein FAM81A isoform X1 [Pelodiscus sinensis] 0.0
habu1_s878_g03112.t1 gi|704547744|ref|XP_010178712.1| PREDICTED: protein FAM81A [Mesitornis unicolor] 0.0
habu1_s878_g03112.t1 gi|641798246|ref|XP_008162283.1| PREDICTED: protein FAM81A [Chrysemys picta bellii] 0.0
habu1_s878_g03112.t1 gi|697501727|ref|XP_009679759.1| PREDICTED: protein FAM81A [Struthio camelus australis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.8
Venom grand-1 2.4
Pit, infrared sensing 8.2
Nose 4.5
Brain-1 25.4
Eye 1.7
fetal fibroblast 5.1
venom gland-2 4.5
Brain-2 17.1
Spleen 1.7
Lung 3.4
Liver 2.2
Kidney 1.4
Pancreas 2.5
Small intestine 1.0
Large intestine 3.4
Stomach 3.2
heart 0.7
ovary 5.2
cheek muscle 1.5

Transcript
Transcript IDhabu1_s878_g03112.t1
Definition-
>habu1_s878_g03112.t1
ttttgctcctttctccctccgccctctttcctccaggacgctggcagaggccccacccgcaaagaggagagagggcaggt
gcatctcgacggcgcggccatgccagcctcgtgggacgtctctggcattcctgcacatctggaagagggcgcaggaggcc
gcccgatgcttaggcaaaggtctggggcagccaggccctgccgcccccagatgtaaatccctggaaagagaagatggccc
agaggagcccaaacttctccaccctcggaccaactgaaagacggatccggaacttcccgctgcacagccaggccctgaca
gcggttccgctgggctcagcccgcctgatggaccagctggaggaccgaatcctcagccatgagaagaccacggcggccct
ggtggagcacgccttccgcatcaaggaggacatcgtctccacgctgcaccggatgcagaacaagggtggcggggaccggc
tagccaggcagctgctggaggagcatatccgcaacatcaccgccatcgtccggcagctgaatcgggacatcgaggctctg
caggagcagatccgggtcagggataacctgagttacggaacaaactcgaccttgaagagcctggagatgcggcagctgtc
tgggctgggggaccttcgtggacgggtttccaggtgtgacgcagggctggccagagtctccgctgagcataaagtcacct
acgagagacttcagagcctcagtaaagagcagcaagcaacaaaattggtcctggagtccaaagtcaaagagacagaaata
caaatttcccatcttttgagcagaatcgaacaatctgtgatgcaacaagacgcaaagctcaagctcgcctacaaagagag
caatcagcagctccatcttctggaggccaagctgcaggacgccatcgaccacctcaccagccagatctcctctgcccgca
gccagatggagcaggagcaggggcgcttcgagaagaagttcctggagaagatagaccaccttttccttgccgtcaaggag
aaaagtgaagtggacagcagggctctggagatgcaactgagcgagatccacaggaagctgcagaaaatggaagccgggca
gaaatgttcaacccaggaaccggaggccaagcaggccgaggacaggatgagcgtccaactcagcaaactccagtccgatt
tcactgaggacatcaaggaagtcaaggcagaggttagcgctggactcagcaccatctatgagagcattggatccctgcag
caggtcctggaatcgaaaatgaaactggacaaggaggagctgcagaagcagatccagcagatgaagctgagagagtctcc
tcctctcagctgtcccagaggacctcctgccctcctccacttcaaggatccagccagcaacagagatgtggcagccctgg
ccggcccccaagaccccattccttgcgcacgctgattgcccgtggaggatgtgaccgaagccccttcctcgcaaccaaag
attgatcaggaagaatgtcccccttatccccactcggccaactgtccggggaaccctccctgcccacatctggcgctggc
agggcctgctcctgctcgtgagccgacaggctgggcagtcctctggccagcgagtctccctttctctggcattgcttggg
agggggaatggtcatctgggaaatggatgcagggatggggagggaaagctggggctcggtcagccttggggcagcctgct
gggacttcccagaatcctcaattcctgttgggggggggatagttgcattttggcctttccagggcatgccaagcttcagg
agggtcccatctgtgatgagaaggtgggcaccccttccttccttctactgccagcctgggaagcagacggtgtgcccggg
ctccaggctgggagccttgcaggaggccctgggtagcccagggagggctcctgggcagcctctgttctggcttgctcaag
ggactggctggctgaggaggtggctgacaggattagctgggcatcacgctgtatctttcctctgttggaaaggcaaatta
aaaaaaaaatctgaattcatccacaataatcatgatgagtaaatttctccaggtatttcttaaatgtctttttgagagca
aatacatgtctacatttatgtaaattttggctgcttaagagacccacaagattggcaagaagcccagcagacttttataa
ataagggcgcaacaattagcttgataagtgtaaaaattttaatagtgaaaaggaaatattggggaggggggatatagcga
catttatagttctcgagggtgttttgctgtaaacctccgtgcaattccccagtgctgctgtgtatgaaccgccagtggat
tccccggccggggtgtttggtctgaactctgttggaagaattttttaagcgctgaataaaagtgaacgtttaacgctccg
ta

Protein
Protein IDhabu1_s878_g03112.t1
Definition-
>habu1_s878_g03112.t1
MAQRSPNFSTLGPTERRIRNFPLHSQALTAVPLGSARLMDQLEDRILSHEKTTAALVEHAFRIKEDIVSTLHRMQNKGGG
DRLARQLLEEHIRNITAIVRQLNRDIEALQEQIRVRDNLSYGTNSTLKSLEMRQLSGLGDLRGRVSRCDAGLARVSAEHK
VTYERLQSLSKEQQATKLVLESKVKETEIQISHLLSRIEQSVMQQDAKLKLAYKESNQQLHLLEAKLQDAIDHLTSQISS
ARSQMEQEQGRFEKKFLEKIDHLFLAVKEKSEVDSRALEMQLSEIHRKLQKMEAGQKCSTQEPEAKQAEDRMSVQLSKLQ
SDFTEDIKEVKAEVSAGLSTIYESIGSLQQVLESKMKLDKEELQKQIQQMKLRESPPLSCPRGPPALLHFKDPASNRDVA
ALAGPQDPIPCAR

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