Gene
| Gene Model ID | habu1_s878_g03117 |
|---|---|
| Locus | habu1_scaffold878 : 354632 ... 370125 : - |
| To GenomeBrowser | habu1_scaffold878:354632..370125 |
| Genes list of scaffold | habu1_scaffold878 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase 3 | GO:0000278 GO:0000790 GO:0006281 GO:0006511 GO:0008234 GO:0016578 GO:0031647 GO:0036459 GO:0042393 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03117.t1 | 1 | 1 | zf-UBP | 29 | 106 | 5.4e-20 | 71.2 | 1.1e-23 | 5.4e-20 | 71.2 |
| habu1_s878_g03117.t1 | 1 | 1 | UCH | 159 | 508 | 0.0 | 230.9 | 0.0 | 0.0 | 230.2 |
| habu1_s878_g03117.t1 | 1 | 1 | UCH_1 | 160 | 490 | 6.2e-28 | 98.0 | 3.6e-31 | 1.8e-27 | 96.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s878_g03117.t1 | gi|602635188|ref|XP_007424462.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Python bivittatus] | 0.0 |
| habu1_s878_g03117.t1 | gi|594040860|ref|XP_006044985.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform X1 [Bubalus bubalis] | 0.0 |
| habu1_s878_g03117.t1 | gi|507635348|ref|XP_004628889.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform X1 [Octodon degus] | 0.0 |
| habu1_s878_g03117.t1 | gi|564244529|ref|XP_006261396.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Alligator mississippiensis] | 0.0 |
| habu1_s878_g03117.t1 | gi|363737872|ref|XP_413755.3| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform X2 [Gallus gallus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 11.5 |
| Venom grand-1 | 7.5 |
| Pit, infrared sensing | 8.2 |
| Nose | 8.4 |
| Brain-1 | 5.0 |
| Eye | 6.0 |
| fetal fibroblast | 14.7 |
| venom gland-2 | 7.7 |
| Brain-2 | 4.6 |
| Spleen | 5.4 |
| Lung | 4.8 |
| Liver | 4.1 |
| Kidney | 4.9 |
| Pancreas | 7.1 |
| Small intestine | 6.5 |
| Large intestine | 8.6 |
| Stomach | 7.7 |
| heart | 4.1 |
| ovary | 42.5 |
| cheek muscle | 3.8 |
Transcript
| Transcript ID | habu1_s878_g03117.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03117.t1 ggcgaggagcggaggcggccggcgggcatcggcggcgccgccatggagtgcccccacctgggcggcagcgtctgcctcgc gcccgactcggccaagttcccgcagggctcgccctcctcgtggtgctgcagcgtgtgccgctctaacaaaagtccttgga tctgcctgacttgctcaagtgtccactgtggaaggtatgtaaatggccacgcaaagaagcattatgaagatgctcaagtt tctttaatgaaccataagaaagcagaaaagcaagaaaagatccagcacatggtgtgcatggattgtagtagttacagtac ctactgttatcgctgtgatgacttcgtagtaaacgataccaagctaggcctggtgcagaaagtccgagagcatctacaga acttggaaaactcaggttttacagtagaccgacataggaaaagaaaacaacttgaaagtgcctccgtaaacagcaaattg ttaaaagtaaacgggagccccacaagcttgtgtgcaacgggtcttcggaacttggggaacacgtgtttcatgaatgccat ccttcagtccctcagtaacattccacagttctgctgctacttcaaagagctgccagcggtggaacttcggaatggaaaga ctgcaggccggcggacctaccacacacggagccaaggcgagggcagcgtttccttggtggaggaattccggaagaccctg tgtgctttgtggcagggaagtcaaaccgccttcagccctgaatccttgttttacgttgtttggaaaatcatgcccaactt caggggctaccagcagcaagatgcccacgagttcatgcgctacctcttggaccatctgcacctggagctgcaggaagggg tcaacggtgctgcccaccccgtcttcgctcaggaggattctggcctcactgccggcagcaggtgctgcgttaacggcact tctaccgttgtcacaactatctttggaggcgtccttcagaatgaagtcaactgcttgatatgtggaactgaatccagaaa gtttgatccattcctagacctctcactagatattccaagtcagttccggaataaacgtagcaagaaccaagagaatggac caatctgcacgttacgggattgtctccgtagcttcaccgacctggaagaacttgatgactcggagctctacatgtgtcac aaatgtaagaagaaacagaagtcaaccaagaagttctggatgcagaagctacccaaagtgctgtgcctgcacctgaaacg ctttcactggacggcctacctgaggaacaaggtggacacctttgtcgagttccccctgcacagcctggacatgaagtgct acttgctggagcctgaaaacagcggcccagacagttgcctctatgaccttgcggcagtggttgtgcaccatgggtcaggg gtcggttctgggcattacacggcatacgcgactcatgaagggcgctggttccatttcaacgacagcacggtgacgctgac ggacgaggagacagtctcgaaagccaaggcctacatcctcttctatgtggaccgccaggctaagtctggatccgagaaac tttaatgcttctctccgccctgtgcatatcaagtccaatggacaaaacatttccagttctccacagatacttgatccgag actcttgatttcattgtgcacttttcaaattttttttgtgggttctagttttattacattgtcggtagtagcatttgact tattaaaaaaatggacacaagctaactttgtggttagttacaccagaaaaaaggcaaaacctcagcagatactgatgtgc tgcttaaacacaaattttatacatagtttcaagagcgacttttatgtttgactttcctgtctccatgttctggtttgctt tctaaaggcacatttccacgagggaaacttgaatccttttgatgagcacgactctgcgtgctctgttaggaaacgcccag gatcagcaactcaaccctaacccccccacccaaatgggatgcaggcacagactttggaatctcctttctttttttaaggg actaaatggggctgcattaaacaggccatgtaactgctgctat |
|
Protein
| Protein ID | habu1_s878_g03117.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03117.t1 MECPHLGGSVCLAPDSAKFPQGSPSSWCCSVCRSNKSPWICLTCSSVHCGRYVNGHAKKHYEDAQVSLMNHKKAEKQEKI QHMVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSGFTVDRHRKRKQLESASVNSKLLKVNGSPTSLCATG LRNLGNTCFMNAILQSLSNIPQFCCYFKELPAVELRNGKTAGRRTYHTRSQGEGSVSLVEEFRKTLCALWQGSQTAFSPE SLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQEGVNGAAHPVFAQEDSGLTAGSRCCVNGTSTVVTTIFGGVLQN EVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPICTLRDCLRSFTDLEELDDSELYMCHKCKKKQKSTKKFWM QKLPKVLCLHLKRFHWTAYLRNKVDTFVEFPLHSLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYATHEG RWFHFNDSTVTLTDEETVSKAKAYILFYVDRQAKSGSEKL |
|