Gene
| Gene Model ID | habu1_s878_g03119 |
|---|---|
| Locus | habu1_scaffold878 : 397841 ... 420655 : - |
| To GenomeBrowser | habu1_scaffold878:397841..420655 |
| Genes list of scaffold | habu1_scaffold878 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine beta-lactamase-like protein mitochondrial | GO:0005737 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03119.t2 | 2 | 1 | Beta-lactamase | 2 | 69 | 2.4e-30 | 105.6 | 1.4e-11 | 4.1e-08 | 32.6 |
| habu1_s878_g03119.t2 | 2 | 2 | Beta-lactamase | 129 | 347 | 2.4e-30 | 105.6 | 2.7e-23 | 8.1e-20 | 71.0 |
| habu1_s878_g03119.t2 | 1 | 1 | Ras | 393 | 533 | 0.0 | 157.0 | 0.0 | 0.0 | 155.9 |
| habu1_s878_g03119.t2 | 1 | 1 | Arf | 395 | 497 | 3.0e-08 | 33.0 | 2.0e-11 | 6.0e-08 | 32.1 |
| habu1_s878_g03119.t2 | 1 | 1 | Miro | 398 | 461 | 4.7e-09 | 36.7 | 4.8e-12 | 1.4e-08 | 35.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s878_g03119.t2 | gi|527255048|ref|XP_005145809.1| | PREDICTED: serine beta-lactamase-like protein LACTB, mitochondrial [Melopsittacus undulatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 12.2 |
| Venom grand-1 | 7.3 |
| Pit, infrared sensing | 12.8 |
| Nose | 14.1 |
| Brain-1 | 7.8 |
| Eye | 8.4 |
| fetal fibroblast | 23.6 |
| venom gland-2 | 7.6 |
| Brain-2 | 7.5 |
| Spleen | 16.1 |
| Lung | 14.4 |
| Liver | 23.4 |
| Kidney | 8.1 |
| Pancreas | 6.5 |
| Small intestine | 15.4 |
| Large intestine | 10.8 |
| Stomach | 8.4 |
| heart | 8.2 |
| ovary | 32.4 |
| cheek muscle | 10.7 |
Transcript
| Transcript ID | habu1_s878_g03119.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03119.t1 gagagaggtctgggcggaaggtataggttacgctgacttggaaaaccgtgtcctctgcggtccggagactgtcctacgaa ttgccagcattagcaaatctctgaccatggttgctgttgcaaagctatgggaagaagggaagctggatttagatgctgct gtgcagaagtatgttccagaatttcctgaaaaagaatatgaaggtgaaaaggtcactattagcacaaggctgcttgtgtc acatttaagtggtatccgccactatgagaaagatatttctaaagtcaaagaagaaaaagaaaaggccaacagaaaagccg caagaacagcagcttctgcagcaaaagagaaagaaaacaaagagactgaaaagagggacttgattaaaggcaagccggaa caggaaggcaaaaattcaaaaagtggaaggaagaaaagggagtttgagcatgaagaatattatttgaaggacaaatttga gcatgtgattgactcactgaatatctttcaaaatgatcctttattctttaaaccaggtagtcagtttttgtattcgaccc acgggtttactctcctgagcgctgtcgtggagggagcttcaaatcagaagttcacggactacatgctgaaaatatttagt gacttgggtatgggatccacggggttggatgagaatgagcctctgatatacaacagagcaaggtattacattcacaacaa aaaaggtcatctcatcaacgccccttacgtggataactcttacaagtgggcaggtggtggctttgtgtccactgtgggcg atcttctcagatttggaaatgccatgctctacggttaccagcttgggcaggtgaaaaacctggctgctggatttcttcct ggttatctcaagcctgacacgatagcaatgatgtggaccacagtcccacagtcccaagattatgcctatggaatggcctg gttcattgtagagaagaagcaggaatgtggccactgcaaagagcagcaacactacaccttccacactggcggggcagtag gagcaagtagcgttctactcattcttcctgaagaattgaactctgggattgccaatagtagctgcctggtcccaccccat ggtgtggtcgtcacagttatttgtaacatgcagtctgttcaccttgatggtattgccttaaaaattgcaaaggaatttga aaaggacaggcttggaagctatagagaaaaacgtggggacctttcactgcagacacggatccattctgatccctgtctgt ctgtctgaattgactttaaaatcagaacaatagaactagatgggaagaaaatcaaactgcagatatgggacacggcgggc caggagagattccgcaccatcacaacagcctactacagaggtgccatggggataatgctggtttacgatatcaccaatga aaagtcttttgacaatattaaaaactggatcaggaacattgaagagcacgcttcttcggatgtggaaaggatgatcctgg gcaacaaatctgacatgaatgagaaaaggcaagtttcgaaggaaaaaggagaaaagttagcaattgactatggcatcaaa tttctggaaaccagtgcaaagtccagcatcaacgtggaagaggctttcttcacccttgcacgggatattatgacaaaact caacaaaaaaatgaatgacaacatttcggcaggggcaagcgggcccgtgaaaatcacagagaaccggtcgaagaagagca gcttctttcgatgcacgctgctttgatgaacttctcctaagagactgcagcatacctagaacaaaaaaataccttttcct gcttctccgaaagcacaggctccgcccggctgctgctgagggctctgcttggacctagaatgggctaaaccaagagaatg gatggggactctccctctgttgaccgccatcgcccgtctcccccctctccgagacgtggaagctgtgaagttgagagact cctgcctgccggagctccgttttctttctttctttctttctttcactgcctgcttcaaaaactgctgagtatattctttg cacatttctgttagtcctcggtggaaagttggggccggggcagagacgcccagtgggtttttggttggtgggccggtcac tctaggagccctccttacaggctttctccgcttcgttttctttcctctccagcgactgcaaacctcttcgtttattaagg gcacgatcctgtccccccccccccaggggcagctagggcctccagggtgggggaagaagggggggctctgctatctgaga caacagtccatcctcctcccctccttcaggtgcagattgttgacctccggtccaggcgggaggctggctggaagaccgag ggctctgtggccttcaaaggggaactgggacttgtgggaaacgagtacacgtacggtgggcacacgttctgaaccttttt tcccccagggatgccaataaacaatgccaccataatgtggagg |
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| Transcript ID | habu1_s878_g03119.t2 |
| Definition | - |
>habu1_s878_g03119.t2 gagagaggtctgggcggaaggtataggttacgctgacttggaaaaccgtgtcctctgcggtccggagactgtcctacgaa ttgccagcattagcaaatctctgaccatggttgctgttgcaaagctatgggaagaagggaagctggatttagatgctgct gtgcagaagtatgttccagaatttcctgaaaaagaatatgaaggtgaaaaggtcactattagcacaaggctgcttgtgtc acatttaagtggtatccgccactatgagaaagatatttctaaagtcaaagaagaaaaagaaaaggccaacagaaaagccg caagaacagcagcttctgcagcaaaagagaaagaaaacaaagagactgaaaagagggacttgattaaaggcaagccggaa caggaaggcaaaaattcaaaaagtggaaggaagaaaagggagtttgagcatgaagaatattatttgaaggacaaatttga gcatgtgattgactcactgaatatctttcaaaatgatcctttattctttaaaccaggtagtcagtttttgtattcgaccc acgggtttactctcctgagcgctgtcgtggagggagcttcaaatcagaagttcacggactacatgctgaaaatatttagt gacttgggtatgggatccacggggttggatgagaatgagcctctgatatacaacagagcaaggtattacattcacaacaa aaaaggtcatctcatcaacgccccttacgtggataactcttacaagtgggcaggtggtggctttgtgtccactgtgggcg atcttctcagatttggaaatgccatgctctacggttaccagcttgggcaggtgaaaaacctggctgctggatttcttcct ggttatctcaagcctgacacgatagcaatgatgtggaccacagtcccacagtcccaagattatgcctatggaatggcctg gttcattgtagagaagaagcaggaatgtggccactgcaaagagcagcaacactacaccttccacactggcggggcagtag gagcaagtagcgttctactcattcttcctgaagaattgaactctgggattgccaatagtagctgcctggtcccaccccat ggtgtggtcgtcacagttatttgtaacatgcagtctgttcaccttgatggtattgccttaaaaattgcaaaggaatttga aaaggacaggcttggaagctatagagaaaaacgtggggacctttcactgcagacacggatccattctgatccctgtctgt ctgtctgaattgactttaaaatcagaacaatagaactagatgggaagaaaatcaaactgcagatatgggacacggcgggc caggagagattccgcaccatcacaacagcctactacagaggtgccatggggataatgctggtttacgatatcaccaatga aaagtcttttgacaatattaaaaactggatcaggaacattgaagagatttcctctcctgttggcaggaatcctgctcagc acgcttcttcggatgtggaaaggatgatcctgggcaacaaatctgacatgaatgagaaaaggcaagtttcgaaggaaaaa ggagaaaagttagcaattgactatggcatcaaatttctggaaaccagtgcaaagtccagcatcaacgtggaagaggcttt cttcacccttgcacgggatattatgacaaaactcaacaaaaaaatgaatgacaacatttcggcaggggcaagcgggcccg tgaaaatcacagagaaccggtcgaagaagagcagcttctttcgatgcacgctgctttgatgaacttctcctaagagactg cagcatacctagaacaaaaaaataccttttcctgcttctccgaaagcacaggctccgcccggctgctgctgagggctctg cttggacctagaatgggctaaaccaagagaatggatggggactctccctctgttgaccgccatcgcccgtctcccccctc tccgagacgtggaagctgtgaagttgagagactcctgcctgccggagctccgttttctttctttctttctttctttcact gcctgcttcaaaaactgctgagtatattctttgcacatttctgttagtcctcggtggaaagttggggccggggcagagac gcccagtgggtttttggttggtgggccggtcactctaggagccctccttacaggctttctccgcttcgttttctttcctc tccagcgactgcaaacctcttcgtttattaagggcacgatcctgtccccccccccccaggggcagctagggcctccaggg tgggggaagaagggggggctctgctatctgagacaacagtccatcctcctcccctccttcaggtgcagattgttgacctc cggtccaggcgggaggctggctggaagaccgagggctctgtggccttcaaaggggaactgggacttgtgggaaacgagta cacgtacggtgggcacacgttctgaaccttttttcccccagggatgccaataaacaatgccaccataatgtggagg |
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Protein
| Protein ID | habu1_s878_g03119.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03119.t1 MVAVAKLWEEGKLDLDAAVQKYVPEFPEKEYEGEKVTISTRLLVSHLSGIRHYEKDISKVKEEKEKANRKAARTAASAAK EKENKETEKRDLIKGKPEQEGKNSKSGRKKREFEHEEYYLKDKFEHVIDSLNIFQNDPLFFKPGSQFLYSTHGFTLLSAV VEGASNQKFTDYMLKIFSDLGMGSTGLDENEPLIYNRARYYIHNKKGHLINAPYVDNSYKWAGGGFVSTVGDLLRFGNAM LYGYQLGQVKNLAAGFLPGYLKPDTIAMMWTTVPQSQDYAYGMAWFIVEKKQECGHCKEQQHYTFHTGGAVGASSVLLIL PEELNSGIANSSCLVPPHGVVVTVICNMQSVHLDGIALKIAKEFEKDRLGSYREKRGDLSLQTRIHSDPCLSVXIDFKIR TIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKSDMNEK RQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKLNKKMNDNISAGASGPVKITENRSKKSSFFRCTLL |
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| Protein ID | habu1_s878_g03119.t2 |
| Definition | - |
>habu1_s878_g03119.t2 MVAVAKLWEEGKLDLDAAVQKYVPEFPEKEYEGEKVTISTRLLVSHLSGIRHYEKDISKVKEEKEKANRKAARTAASAAK EKENKETEKRDLIKGKPEQEGKNSKSGRKKREFEHEEYYLKDKFEHVIDSLNIFQNDPLFFKPGSQFLYSTHGFTLLSAV VEGASNQKFTDYMLKIFSDLGMGSTGLDENEPLIYNRARYYIHNKKGHLINAPYVDNSYKWAGGGFVSTVGDLLRFGNAM LYGYQLGQVKNLAAGFLPGYLKPDTIAMMWTTVPQSQDYAYGMAWFIVEKKQECGHCKEQQHYTFHTGGAVGASSVLLIL PEELNSGIANSSCLVPPHGVVVTVICNMQSVHLDGIALKIAKEFEKDRLGSYREKRGDLSLQTRIHSDPCLSVXIDFKIR TIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEISSPVGRNPAQHASSDVERM ILGNKSDMNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKLNKKMNDNISAGASGPVKITENRSK KSSFFRCTLL |
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