Gene
| Gene Model ID | habu1_s878_g03120 |
|---|---|
| Locus | habu1_scaffold878 : 424455 ... 459115 : - |
| To GenomeBrowser | habu1_scaffold878:424455..459115 |
| Genes list of scaffold | habu1_scaffold878 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03120.t4 | 1 | 1 | Tropomyosin_1 | 12 | 127 | 8.9e-25 | 87.2 | 9.2e-25 | 8.0e-22 | 77.6 |
| habu1_s878_g03120.t4 | 1 | 1 | Tropomyosin | 23 | 255 | 0.0 | 283.0 | 0.0 | 0.0 | 282.6 |
| habu1_s878_g03120.t4 | 1 | 1 | TMF_DNA_bd | 167 | 235 | 3.6e-06 | 26.6 | 4.2e-09 | 3.6e-06 | 26.6 |
| habu1_s878_g03120.t4 | 1 | 1 | Laminin_II | 179 | 245 | 4.1e-06 | 26.5 | 1.2e-06 | 0.0011 | 18.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s878_g03120.t4 | gi|568961229|ref|XP_006511109.1| | PREDICTED: tropomyosin alpha-1 chain isoform X10 [Mus musculus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 74.6 |
| Venom grand-1 | 1142.2 |
| Pit, infrared sensing | 256.1 |
| Nose | 26.7 |
| Brain-1 | 22.7 |
| Eye | 44.6 |
| fetal fibroblast | 450.0 |
| venom gland-2 | 66.6 |
| Brain-2 | 22.5 |
| Spleen | 39.0 |
| Lung | 105.6 |
| Liver | 121.8 |
| Kidney | 68.4 |
| Pancreas | 33.5 |
| Small intestine | 110.4 |
| Large intestine | 207.9 |
| Stomach | 220.3 |
| heart | 68.4 |
| ovary | 48.9 |
| cheek muscle | 9525.6 |
Transcript
| Transcript ID | habu1_s878_g03120.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03120.t1 aggtcattccagagggcaggagctgccacagagaaggctctccccctgggggtcgccagccggcattgactggccgatgg caccctaaggaggccctctctgtgggagcggactggtcgaagggagatatttgcctgcctgctcctgggtgtggatgccc aggcagaggaaatggcgatgtccatctaaggcagcggaggtggctgcagatggatttattggccttttaaggattgtggt cattttgaacacgggatgtagtcaaggaatcaggagaagtctatttgttctcatcatcttcaaccaagaggcaaggaaaa ggtcttcaaaagaggacgacattgtgcagttggaaaagcaactgcgggtctcggaggacgagagggaccgggtcctggag gagctgcatagcgccgaggacagcctcctcactgcggacgagaaggccaccaagttggaagatgagttggtgtctctgca aaagaagctgaagggcaccgaagatgagctggacaaatattcagagtccctgaaagacgcccaggagaagctggaggtgg cagagaagaaagctgcagatgccgagagcgatgtggcttctctgaacaggcgcatccagctggtagaggaggagctggac cgggcccaggagcgtttggcgacagccctgcagaagctggaggaggccgagaaggcggcagacgagagtgagaggggcat gaaggtcattgagagcagagccctgaaggatgaggagaagatggagatccaggagatccagctgaaagaagccaagcaca ttgcagaggacgctgaccgcaagtatgaggaggtggcccggaagctggtgatcatcgagagcgacctggagcgtgcagaa gaacgagccgagctctccgaaagccaagtccggcagctggaagaacagctaagaataatggatcaaaccttgaaagcact aatggcagctgaggaaaagtactcccagaaggaagacaaatatgaagaggaaatcaaggttcttactgacaaactgaaag aggctgagacccgagccgagtttgcagagaggtcggtaaccaagctagagaagagcattgatgacttagaagaccagctc taccagcagcttgagcaaaaccggcgtctcactaatgagctcaagttggccctgaatgaggattaagctttcgtacgaac ccttcttgctaacccgtgtgtcttgactcgcctgccattgaacgatgcgagagacctgtgtctgctgccagttggggctg aagctgggtggacctaagaggttttaggcatttcctttccaactttgacatgggctacactcttgatcatattttgataa aatgagaccaaggagcctccttggaaggggtggttttactagcattctggtcttggggggaaatgttgaaattggaatct agatgaagtttgcttcccgttgggatctgaagctccattttcctagcccgtcaaaacaattttgcgcacaggcagcagaa ggggccttttgttgataacctctgctagttttgtggtacgtttgcatcgttgtgaagctgctgttgctgtgttgattgta tgtggatctcaagcttttgtgcttttgtctctcgcgtatttaatgcctttcctacacaatgcgcatgtgactttacacta acaactattgtaaaagctgctttacttttccctcacagcagaaaaatatctgaaatttccctagcagacaaatagctgcc gctttccttcaccctccatgttgtcgtgttctaccagttcttcagtcctggtggaataaatttgcaaaatacttttgtca gc |
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| Transcript ID | habu1_s878_g03120.t2 |
| Definition | - |
>habu1_s878_g03120.t2 accgctgggttaagggacctgtttgggcagggagagcagcagggaagagggaagggatcccggagctgcttccctggagg gcagccatgctttccggtgcccagaatccacactcgcccacctcgccccgtggctggcatagagcctggctcgcttagcc aagagtctgcatttgctgagcgaggctgggctgcttccggtcaggggttcctgggaacctgcagtttggagggcaaggag tttgttgaatggaaccgggctggttgttcccgagagaaagtagtggagttgaggacgacattgtgcagttggaaaagcaa ctgcgggtctcggaggacgagagggaccgggtcctggaggagctgcatagcgccgaggacagcctcctcactgcggacga gaaggccaccaagttggaagatgagttggtgtctctgcaaaagaagctgaagggcaccgaagatgagctggacaaatatt cagagtccctgaaagacgcccaggagaagctggaggtggcagagaagaaagctgcagatgccgagagcgatgtggcttct ctgaacaggcgcatccagctggtagaggaggagctggaccgggcccaggagcgtttggcgacagccctgcagaagctgga ggaggccgagaaggcggcagacgagagtgagaggggcatgaaggtcattgagagcagagccctgaaggatgaggagaaga tggagatccaggagatccagctgaaagaagccaagcacattgcagaggacgctgaccgcaagtatgaggaggtggcccgg aagctggtgatcatcgagagcgacctggagcgtgcagaagaacgagccgagctctccgaaagccaagtccggcagctgga agaacagctaagaataatggatcaaaccttgaaagcactaatggcagctgaggaaaagtactcccagaaggaagacaaat atgaagaggaaatcaaggttcttactgacaaactgaaagaggctgagacccgagccgagtttgcagagaggtcggtaacc aagctagagaagagcattgatgacttagaagaccagctctaccagcagcttgagcaaaaccggcgtctcactaatgagct caagttggccctgaatgaggattaagctttcgtacgaacccttcttgctaacccgtgtgtcttgactcgcctgccattga acgatgcgagagacctgtgtctgctgccagttggggctgaagctgggtggacctaagaggttttaggcatttcctttcca actttgacatgggctacactcttgatcatattttgataaaatgagaccaaggagcctccttggaaggggtggttttacta gcattctggtcttggggggaaatgttgaaattggaatctagatgaagtttgcttcccgttgggatctgaagctccatttt cctagcccgtcaaaacaattttgcgcacaggcagcagaaggggccttttgttgataacctctgctagttttgtggtacgt ttgcatcgttgtgaagctgctgttgctgtgttgattgtatgtggatctcaagcttttgtgcttttgtctctcgcgtattt aatgcctttcctacacaatgcgcatgtgactttacactaacaactattgtaaaagctgctttacttttccctcacagcag aaaaatatctgaaatttccctagcagacaaatagctgccgctttccttcaccctccatgttgtcgtgttctaccagttct tcagtcctggtggaataaatttgcaaaatacttttgtcagc |
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| Transcript ID | habu1_s878_g03120.t3 |
| Definition | - |
>habu1_s878_g03120.t3 accgctgggttaagggacctgtttgggcagggagagcagcagggaagagggaagggatcccggagctgcttccctggagg gcagccatgctttccggtgcccagaatccacactcgcccacctcgccccgtggctggcatagagcctggctcgcttagcc aagagtctgcatttgctgagcgaggctgggctgcttccggtcaggggttcctgggaacctgcagtttggagggcaaggag tttgttgaatggaaccgggctggttgttcccgagagaaagtagtggagttgaggacgacattgtgcagttggaaaagcaa ctgcgggtctcggaggacgagagggaccgggtcctggaggagctgcatagcgccgaggacagcctcctcactgcggacga gaaggccaccaagttggaagatgagttggtgtctctgcaaaagaagctgaagggcaccgaagatgagctggacaaatatt cagagtccctgaaagacgcccaggagaagctggaggtggcagagaagaaagctgcagatgccgagagcgatgtggcttct ctgaacaggcgcatccagctggtagaggaggagctggaccgggcccaggagcgtttggcgacagccctgcagaagctgga ggaggccgagaaggcggcagacgagagtgagaggggcatgaaggtcattgagagcagagccctgaaggatgaggagaaga tggagatccaggagatccagctgaaagaagccaagcacattgcagaggacgctgaccgcaagtatgaggaggtggcccgg aagctggtgatcatcgagagcgacctggagcgtgcagaagaacgagccgagctctccgaaagcaaatgtgctgaacttga agaggaattgaaaactgtgaccaacaacctgaggtcgctggaagctcaggcggagaagtactcccagaaggaagacaaat atgaagaggaaatcaaggttcttactgacaaactgaaagaggctgagacccgagccgagtttgcagagaggtcggtaacc aagctagagaagagcattgatgacttagaagaccagctctaccagcagcttgagcaaaaccggcgtctcactaatgagct caagttggccctgaatgaggattaagctttcgtacgaacccttcttgctaacccgtgtgtcttgactcgcctgccattga acgatgcgagagacctgtgtctgctgccagttggggctgaagctgggtggacctaagaggttttaggcatttcctttcca actttgacatgggctacactcttgatcatattttgataaaatgagaccaaggagcctccttggaaggggtggttttacta gcattctggtcttggggggaaatgttgaaattggaatctagatgaagtttgcttcccgttgggatctgaagctccatttt cctagcccgtcaaaacaattttgcgcacaggcagcagaaggggccttttgttgataacctctgctagttttgtggtacgt ttgcatcgttgtgaagctgctgttgctgtgttgattgtatgtggatctcaagcttttgtgcttttgtctctcgcgtattt aatgcctttcctacacaatgcgcatgtgactttacactaacaactattgtaaaagctgctttacttttccctcacagcag aaaaatatctgaaatttccctagcagacaaatagctgccgctttccttcaccctccatgttgtcgtgttctaccagttct tcagtcctggtggaataaatttgcaaaatacttttgtcagc |
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| Transcript ID | habu1_s878_g03120.t4 |
| Definition | - |
>habu1_s878_g03120.t4 accgctgggttaagggacctgtttgggcagggagagcagcagggaagagggaagggatcccggagctgcttccctggagg gcagccatgctttccggtgcccagaatccacactcgcccacctcgccccgtggctggcatagagcctggctcgcttagcc aagagtctgcatttgctgagcgaggctgggctgcttccggtcaggggttcctgggaacctgcagtttggagggcaaggag tttgttgaatggaaccgggctggttgttcccgagagaaagtagtggagttgaggacgacattgtgcagttggaaaagcaa ctgcgggtctcggaggacgagagggaccgggtcctggaggagctgcatagcgccgaggacagcctcctcactgcggacga gaaggccaccaaggccgagagcgatgtggcttctctgaacaggcgcatccagctggtagaggaggagctggaccgggccc aggagcgtttggcgacagccctgcagaagctggaggaggccgagaaggcggcagacgagagtgagaggggcatgaaggtc attgagagcagagccctgaaggatgaggagaagatggagatccaggagatccagctgaaagaagccaagcacattgcaga ggacgctgaccgcaagtatgaggaggtggcccggaagctggtgatcatcgagagcgacctggagcgtgcagaagaacgag ccgagctctccgaaagccaagtccggcagctggaagaacagctaagaataatggatcaaaccttgaaagcactaatggca gctgaggaaaagtactcccagaaggaagacaaatatgaagaggaaatcaaggttcttactgacaaactgaaagaggctga gacccgagccgagtttgcagagaggtcggtaaccaagctagagaagagcattgatgacttagaagaccagctctaccagc agcttgagcaaaaccggcgtctcactaatgagctcaagttggccctgaatgaggattaagctttcgtacgaacccttctt gctaacccgtgtgtcttgactcgcctgccattgaacgatgcgagagacctgtgtctgctgccagttggggctgaagctgg gtggacctaagaggttttaggcatttcctttccaactttgacatgggctacactcttgatcatattttgataaaatgaga ccaaggagcctccttggaaggggtggttttactagcattctggtcttggggggaaatgttgaaattggaatctagatgaa gtttgcttcccgttgggatctgaagctccattttcctagcccgtcaaaacaattttgcgcacaggcagcagaaggggcct tttgttgataacctctgctagttttgtggtacgtttgcatcgttgtgaagctgctgttgctgtgttgattgtatgtggat ctcaagcttttgtgcttttgtctctcgcgtatttaatgcctttcctacacaatgcgcatgtgactttacactaacaacta ttgtaaaagctgctttacttttccctcacagcagaaaaatatctgaaatttccctagcagacaaatagctgccgctttcc ttcaccctccatgttgtcgtgttctaccagttcttcagtcctggtggaataaatttgcaaaatacttttgtcagc |
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Protein
| Protein ID | habu1_s878_g03120.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03120.t1 MPRQRKWRCPSKAAEVAADGFIGLLRIVVILNTGCSQGIRRSLFVLIIFNQEARKRSSKEDDIVQLEKQLRVSEDERDRV LEELHSAEDSLLTADEKATKLEDELVSLQKKLKGTEDELDKYSESLKDAQEKLEVAEKKAADAESDVASLNRRIQLVEEE LDRAQERLATALQKLEEAEKAADESERGMKVIESRALKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLER AEERAELSESQVRQLEEQLRIMDQTLKALMAAEEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLED QLYQQLEQNRRLTNELKLALNED |
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| Protein ID | habu1_s878_g03120.t2 |
| Definition | - |
>habu1_s878_g03120.t2 MEPGWLFPRESSGVEDDIVQLEKQLRVSEDERDRVLEELHSAEDSLLTADEKATKLEDELVSLQKKLKGTEDELDKYSES LKDAQEKLEVAEKKAADAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRALKDEEKMEI QEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSESQVRQLEEQLRIMDQTLKALMAAEEKYSQKEDKYEE EIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDQLYQQLEQNRRLTNELKLALNED |
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| Protein ID | habu1_s878_g03120.t3 |
| Definition | - |
>habu1_s878_g03120.t3 MEPGWLFPRESSGVEDDIVQLEKQLRVSEDERDRVLEELHSAEDSLLTADEKATKLEDELVSLQKKLKGTEDELDKYSES LKDAQEKLEVAEKKAADAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRALKDEEKMEI QEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLRSLEAQAEKYSQKEDKYEE EIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDQLYQQLEQNRRLTNELKLALNED |
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| Protein ID | habu1_s878_g03120.t4 |
| Definition | - |
>habu1_s878_g03120.t4 MEPGWLFPRESSGVEDDIVQLEKQLRVSEDERDRVLEELHSAEDSLLTADEKATKAESDVASLNRRIQLVEEELDRAQER LATALQKLEEAEKAADESERGMKVIESRALKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAEL SESQVRQLEEQLRIMDQTLKALMAAEEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDQLYQQLE QNRRLTNELKLALNED |
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