Gene
| Gene Model ID | habu1_s878_g03126 |
|---|---|
| Locus | habu1_scaffold878 : 791014 ... 804655 : + |
| To GenomeBrowser | habu1_scaffold878:791014..804655 |
| Genes list of scaffold | habu1_scaffold878 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03126.t1 | 1 | 1 | NARG2_C | 676 | 766 | 1.6e-23 | 83.0 | 1.8e-27 | 2.7e-23 | 82.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s878_g03126.t1 | gi|602649760|ref|XP_007431281.1| | PREDICTED: NMDA receptor-regulated protein 2 [Python bivittatus] | 0.0 |
| habu1_s878_g03126.t1 | gi|557269582|ref|XP_006020098.1| | PREDICTED: NMDA receptor-regulated protein 2 isoform X1 [Alligator sinensis] | 0.0 |
| habu1_s878_g03126.t1 | gi|637350186|ref|XP_008118166.1| | PREDICTED: NMDA receptor-regulated protein 2 [Anolis carolinensis] | 0.0 |
| habu1_s878_g03126.t1 | gi|564230006|ref|XP_006259440.1| | PREDICTED: NMDA receptor-regulated protein 2 isoform X1 [Alligator mississippiensis] | 0.0 |
| habu1_s878_g03126.t1 | gi|641798323|ref|XP_008162307.1| | PREDICTED: NMDA receptor-regulated protein 2 isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.1 |
| Venom grand-1 | 4.5 |
| Pit, infrared sensing | 2.6 |
| Nose | 2.8 |
| Brain-1 | 2.6 |
| Eye | 3.4 |
| fetal fibroblast | 3.3 |
| venom gland-2 | 7.8 |
| Brain-2 | 2.6 |
| Spleen | 2.8 |
| Lung | 4.3 |
| Liver | 5.3 |
| Kidney | 2.9 |
| Pancreas | 4.1 |
| Small intestine | 4.2 |
| Large intestine | 3.0 |
| Stomach | 1.9 |
| heart | 4.3 |
| ovary | 5.1 |
| cheek muscle | 3.3 |
Transcript
| Transcript ID | habu1_s878_g03126.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03126.t1 attcccggagcttggggcggggcttgctgacacttgccaccaggacgggtagacgcaaggcaagtggcggtgggccaggc tcaagatggcggttcgtggttggatgacgctgcgctgggacaccccccctcaaaatggtcacgatgtgtatttctctcga gatctttatgagaaatactctctggctccgaccctctccgaactaatgtcattatcagaaaggcactcggagaagaaagt ggctgcgtcaagcttgggacctgaaaagaagcagcagcctggccaacagactagagtgaaagccgagcctcttgtgaccc cccctccccaggagcccagggtcccctacccttacgtttccagcctgtctgagaaagagcaaagaagatacttatttctt ttgtctgaatatttaaatgctgacccaaacctcttgcactggtctcagcaaaggaattacacacagtatctgcaaatgaa agaatttgtcagcaaagaagttgcagaattcttgaaattcgcccagaacgctgctagaagctgttctaaagattacagtg acatctctgaagacgcattgatttacaccaaggattttctgagtgctcgtgtgggttatgtgaagaattaccctgagtgg tattctctccacgaagtgaccagcctcatgggcggacgatttaatagagaattgaccctcaagtttgagaaaagtcttct tgccttgggaatggtgcaccttgttaagcgattcttccctaagctgccagcatcgattaattttcctgctgataaatcta agcgtgaactactctgtgggactccggagcaccgtgctgcccagctgcacaatgatgttagcaccgatccaaatgctgaa agactggctgccaaatactgtcctcaggtggtcctgacggaagaatccttgtatactctgttgaacaatcatggtctgga ttataagcagcagtgggagcttcctgtgtctgtgaaaacagtttctcttggtggtctgaaaccagtcagagtggcctaca tcgaccccccgctccctaagaaggagatgacggtgagggaaaagaaccatttttttcacgaattcctgggagattttcat atgacaaagcagtccagtattgtagctcgggctgtgatactagacaagccatcagaagagccgccaggaacagcgcttaa gacctgccaaggcagacccttgcgggaatccatttctgcagacctggactttgatacggacgtcacagaactggagagct ttgcctgggccgcaaagcctctgagcgcttctccagctgaggtcgctcctgcaaagccggccggattgtctgcagtctta ccggcgcacctgaaaacggaaaaaggtcaggaagggaggagcgaagcgcaggagcgggaaacggcgtctagcagcgggaa ggcatcgccctcaggaaggaatcttctggatttggatagcgagggaaactcatcgggtgaaacgttcaagccaatggaaa cggagccagagggcagaagtctggaccccaatttcttgatcgcttcttcagataaaaatcgtaatctcagtgaaggaact gctgaagacgtccggtcccctgccctgtcctgcagcagtgacacggatggggaacatctgatcatcgacgcagaatgcga agctggccacgtgtctgaacctggggcggtcacttccacccccggccctggaggacctgcttctccttcacccagccctg gacaggccccatcagaaaagccagccgggtcttcagagatgcacagcaagaatgctccctgcaagcctcccccgcggtta tcccaggaaatcgatcccctggggcagattttgaaaatgcaaaccaagctgctgaaacccccatctccaaattgtcaggg gcacctgctggcaaccagcgcaaggagtttgaatcctacccaaggccaggcaaatgcccattctctccccttggcatctt cagtggcagagccgggacaaaataccgtaacaaatacaggcgcctcccccaagtttacctgggcaacctattaccagggg cctcagaaagggatactctgggatgcagccgaagatgcagctgactacgaacctcctcagcatggcaacctggtctacaa attgtacagcttggaggacatgctgctgttggtgcgcaccaccatccagaaaacagagttgagaccccatcagaaaaagg caaaattcaggaggcactttcctgtttacgtgttgccaaagttagaataccaggccttctacggagcagaaaccttcacg gaagacgaagtctgtcgactctggacagaaagcttgttacattccaatacttccttcaccgtgggccaaccaattcatta catattctccaaaacatcttgaagaaagtggctgggtacgtatgtggcttcctctgttccttctttctttctttgtgttg tgcgtaacaaacgatttaaactaaggagaggtccaggactccaggatccagtgctgggaagctcgtagccaacacttgga acttgggataaggaggaaagatccgaatcaggtctggatcatcatcctcgcacacgttcaaaaccgcatgtaccggtgac aaggtgcgaaggaggcagtttgtgtctgacagagccagggggagcagactgaccgatcgatcgattttcattttcatttc tgtagccgcccatctcagcaaaagactctgggcagctcacaaatcaaaatgtacgttaacaattaaaatttaaaaaacat attaaaacaataaaaacagtaaaaagcattaaaaca |
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Protein
| Protein ID | habu1_s878_g03126.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03126.t1 MAVRGWMTLRWDTPPQNGHDVYFSRDLYEKYSLAPTLSELMSLSERHSEKKVAASSLGPEKKQQPGQQTRVKAEPLVTPP PQEPRVPYPYVSSLSEKEQRRYLFLLSEYLNADPNLLHWSQQRNYTQYLQMKEFVSKEVAEFLKFAQNAARSCSKDYSDI SEDALIYTKDFLSARVGYVKNYPEWYSLHEVTSLMGGRFNRELTLKFEKSLLALGMVHLVKRFFPKLPASINFPADKSKR ELLCGTPEHRAAQLHNDVSTDPNAERLAAKYCPQVVLTEESLYTLLNNHGLDYKQQWELPVSVKTVSLGGLKPVRVAYID PPLPKKEMTVREKNHFFHEFLGDFHMTKQSSIVARAVILDKPSEEPPGTALKTCQGRPLRESISADLDFDTDVTELESFA WAAKPLSASPAEVAPAKPAGLSAVLPAHLKTEKGQEGRSEAQERETASSSGKASPSGRNLLDLDSEGNSSGETFKPMETE PEGRSLDPNFLIASSDKNRNLSEGTAEDVRSPALSCSSDTDGEHLIIDAECEAGHVSEPGAVTSTPGPGGPASPSPSPGQ APSEKPAGSSEMHSKNAPCKPPPRLSQEIDPLGQILKMQTKLLKPPSPNCQGHLLATSARSLNPTQGQANAHSLPLASSV AEPGQNTVTNTGASPKFTWATYYQGPQKGILWDAAEDAADYEPPQHGNLVYKLYSLEDMLLLVRTTIQKTELRPHQKKAK FRRHFPVYVLPKLEYQAFYGAETFTEDEVCRLWTESLLHSNTSFTVGQPIHYIFSKTS |
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