Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s878_g03127
Locus habu1_scaffold878 : 954933 ... 966232 : +
To GenomeBrowser habu1_scaffold878:954933..966232
Genes list of scaffold habu1_scaffold878

Annotation by Blast2GO
Annotation GO
bcl2 adenovirus e1b 19 kda protein-interacting protein 2 isoform x1 GO:0005635 GO:0005814 GO:0006915 GO:0031616 GO:0043410 GO:0045666 GO:0051057 GO:0051146 GO:0051297

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s878_g03127.t4 1 1 BNIP2 44 159 1.1e-37 128.9 3.69999e-41 1.8e-37 128.3
habu1_s878_g03127.t4 1 1 CRAL_TRIO_2 161 297 1.6e-27 96.2 5.0e-31 2.5e-27 95.6
habu1_s878_g03127.t4 1 1 CRAL_TRIO 201 286 2.7e-08 33.4 8.9e-12 4.4e-08 32.7

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 11.7
Venom grand-1 24.8
Pit, infrared sensing 17.3
Nose 12.6
Brain-1 5.6
Eye 12.8
fetal fibroblast 14.2
venom gland-2 13.7
Brain-2 5.0
Spleen 12.4
Lung 15.0
Liver 10.2
Kidney 11.4
Pancreas 13.0
Small intestine 14.3
Large intestine 14.3
Stomach 16.4
heart 37.3
ovary 35.1
cheek muscle 51.2

Transcript
Transcript IDhabu1_s878_g03127.t1
Definition-
>habu1_s878_g03127.t1
cttccagccaccgcacagcgcgcaggcgtacacagcggcccgctccatttcctgaggaaaggaggaggctgcgtcctgct
tcctgtttgctcacgtgtccttccggggcagggtcgccaccttcgggaggggtcgttccggccggctgtgagagagaggc
accgcgctgagaagcatattttgtagctcctaacgtctcccacaacaattcggaactctggatcaagacggagttgcatt
agccctcgaggcaaagctgaggatggaaggagtggaagttaaagaggaatggcaagacgaagactttcccagacctttac
cagaagatgaccatattgaagctatgtctgggccagctgaaagaggagaccaatccgaaattaatggcaacaaagttaag
aagaaactaatagctccaaatataaacttgactttggatcagagtgaagaatccattttatctgggttagaggcaagtgg
agatattgacttggatgatatagacaccccctccgagaacagcaataatgagtttgagtgggaagatgaccttccaaagc
agaaaagcagcgatgccgttcggaagggctccctgctggaatacacagcatcggaagagaaggaggaggaacgacggtgg
cgaatgtaccagattggtgaccaaggtcaccgagtagacatgagggccattgagccctacaagaaagtgattagtcacgg
aggctattacggggatgggctgaatgcaattattgtctttgcggtttgcttcatgccagaaagtagtcagccaaactacc
gatacttaatggataatctgtttaaatacgttatcggctccctagaattattaatagcggagagctatatgattgtttat
ctaaacggggcaaccacccggcggaagatgcccagtttaggttggctcaggaagtgttaccagcaaattgacaggaggct
aaggaaaaacctgaagtcactaataatagttcatccttcctggttcattagaacacttctggcaatcacaaagccattta
ttagctcaaaattcagccaaaaaatcagatacgtctttaccttggcagagctggcagagctcattcccatggacagcgtt
accatccccgaatgcataaaacggtatgaagaagaaaaatttaaaaagaaactccaaagaattgatcaagaacttaatgg
gaaacaggagcagacgtctgaacagtaaaaaaaaaaaagtgtttttgaattcaagccgagagtgaagaacatgctgggag
atttgaggtcctgaagaacgctctggccttctgcgtccagacttggcatgttggatgacgcactgctgagtgggtttgca
agtcccaggtgatgctgacacttcatagttgccttgattataacttttacactgcagtgtcacaaaggcatcctaggagg
ggcacccatttttgtatcgcgatgcttattcagtaagtatttatatgcttcgacgttaaggagagagatcatatatattt
ttatgactcttcaacgcatattttataatgttcatctgcaaaaaaaaacaacacctctgagacacactagcccaccgatg
acggttgtcatttatttaggaataaaatgcatgagaatttcttatttatggtgaaatgcttcttggctaaggaagagaga
aatgtaacttggttatctcctaggctagcaagatcctttgctgtttccactgtgggatgtgcctaaccctggagctgggt
gtcctcagcacaaactcagttcagtccaggcccttctgggttgaaactccagtgtttcaactctctctgttgaatgttgg
gctggtggaggctggctggctctggatgcccagggagtgacttatttgggatattgggcgacatcccagagcagaacagt
ggtggcctccacccagtcttccccttgctaccatggagggtatctcggcccagcttctgatgtgccttgctgctttgccg
cccagccatgtggagcggagttccagaagacggtatcaggatgtgacactcaagagtagagaaagtgtatccagagttaa
gggcaaggagaacagctttgcctacggaggctgttctcaagggcccagcatcctgggtctctcgcaaagcttcccatcta
aggtggaagaagaaggccaggtggtcattttgtactttggaaggcaaagctcttgaaacagcgctttcccccagcactag
attcactttatacacccttttttaaaggagatgtgtgtgtgtgtgttgcatgttttacctgtttagacgaaacagctgct
ttaagagcggccttctcaataaggttggggatgtgtcgtgtgcactaattcctagcgggttaatcatcaaagccatagtg
gaatgtagcaggaacgttacgtttttggaaagcttgggcatcgctctttagaaatattttcatttgtatttaaattttgt
gcgtgttgttagcaacacagcgttttcatgttccccagtgtttatggggggaaaaaataccgcccgtgtgttggtttata
acccagtcaataaaatatttttaaataaaggcttta
Transcript IDhabu1_s878_g03127.t2
Definition-
>habu1_s878_g03127.t2
cgctccatttcctgaggaaaggaggaggctgcgtcctgcttcctgtttgctcacgtgtccttccggggcagggtcgccac
cttcgggaggggtcgttccggccggctgtgagagagaggcaccgcgctgagaagcatattttgtagctcctaacgtctcc
cacaacaattcggaactctggatcaagacggagttgcattagccctcgaggcaaagctgaggatggaaggagtggaagtt
aaagaggaatggcaagacgaagactttcccagacctttaccagaagatgaccatattgaagctatgtctgggccagctga
aagaggagaccaatccgagtgaagaatccattttatctgggttagaggcaagtggagatattgacttggatgatatagac
accccctccgagaacagcaataatgagtttgagtgggaagatgaccttccaaagcagaaaagcagcgatgccgttcggaa
gggctccctgctggaatacacagcatcggaagagaaggaggaggaacgacggtggcgaatgtaccagattggtgaccaag
gtcaccgagtagacatgagggccattgagccctacaagaaagtgattagtcacggaggctattacggggatgggctgaat
gcaattattgtctttgcggtttgcttcatgccagaaagtagtcagccaaactaccgatacttaatggataatctgtttaa
atacgttatcggctccctagaattattaatagcggagagctatatgattgtttatctaaacggggcaaccacccggcgga
agatgcccagtttaggttggctcaggaagtgttaccagcaaattgacaggaggctaaggaaaaacctgaagtcactaata
atagttcatccttcctggttcattagaacacttctggcaatcacaaagccatttattagctcaaaattcagccaaaaaat
cagatacgtctttaccttggcagagctggcagagctcattcccatggacagcgttaccatccccgaatgcataaaacggt
atgaagaagaaaaatttaaaaagaaactccaaagaattgatcaagaacttaatgggaaacaggagcagacgtctgaacag
taaaaaaaaaaaagtgtttttgaattcaagccgagagtgaagaacatgctgggagatttgaggtcctgaagaacgctctg
gccttctgcgtccagacttggcatgttggatgacgcactgctgagtgggtttgcaagtcccaggtgatgctgacacttca
tagttgccttgattataacttttacactgcagtgtcacaaaggcatcctaggaggggcacccatttttgtatcgcgatgc
ttattcagtaagtatttatatgcttcgacgttaaggagagagatcatatatatttttatgactcttcaacgcatatttta
taatgttcatctgcaaaaaaaaacaacacctctgagacacactagcccaccgatgacggttgtcatttatttaggaataa
aatgcatgagaatttcttatttatggtgaaatgcttcttggctaaggaagagagaaatgtaacttggttatctcctaggc
tagcaagatcctttgctgtttccactgtgggatgtgcctaaccctggagctgggtgtcctcagcacaaactcagttcagt
ccaggcccttctgggttgaaactccagtgtttcaactctctctgttgaatgttgggctggtggaggctggctggctctgg
atgcccagggagtgacttatttgggatattgggcgacatcccagagcagaacagtggtggcctccacccagtcttcccct
tgctaccatggagggtatctcggcccagcttctgatgtgccttgctgctttgccgcccagccatgtggagcggagttcca
gaagacggtatcaggatgtgacactcaagagtagagaaagtgtatccagagttaagggcaaggagaacagctttgcctac
ggaggctgttctcaagggcccagcatcctgggtctctcgcaaagcttcccatctaaggtggaagaagaaggccaggtggt
cattttgtactttggaaggcaaagctcttgaaacagcgctttcccccagcactagattcactttatacacccttttttaa
aggagatgtgtgtgtgtgtgttgcatgttttacctgtttagacgaaacagctgctttaagagcggccttctcaataaggt
tggggatgtgtcgtgtgcactaattcctagcgggttaatcatcaaagccatagtggaatgtagcaggaacgttacgtttt
tggaaagcttgggcatcgctctttagaaatattttcatttgtatttaaattttgtgcgtgttgttagcaacacagcgttt
tcatgttccccagtgtttatggggggaaaaaataccgcccgtgtgttggtttataacccagtcaataaaatatttttaaa
taaaggcttta
Transcript IDhabu1_s878_g03127.t3
Definition-
>habu1_s878_g03127.t3
cgctccatttcctgaggaaaggaggaggctgcgtcctgcttcctgtttgctcacgtgtccttccggggcagggtcgccac
cttcgggaggggtcgttccggccggctgtgagagagaggcaccgcgctgagctcctaacgtctcccacaacaattcggaa
ctctggatcaagacggagttgcattagccctcgaggcaaagctgaggatggaaggagtggaagttaaagaggaatggcaa
gacgaagactttcccagacctttaccagaagatgaccatattgaagctatgtctgggccagctgaaagaggagaccaatc
cgaaattaatggcaacaaagttaagaagaaactaatagctccaaatataaacttgactttggatcagagtgaagaatcca
ttttatctgggttagaggcaagtggagatattgacttggatgatatagacaccccctccgagaacagcaataatgagttt
gagtgggaagatgaccttccaaagcagaaaagcagcgatgccgttcggaagggctccctgctggaatacacagcatcgga
agagaaggaggaggaacgacggtggcgaatgtaccagattggtgaccaaggtcaccgagtagacatgagggccattgagc
cctacaagaaagtgattagtcacggaggctattacggggatgggctgaatgcaattattgtctttgcggtttgcttcatg
ccagaaagtagtcagccaaactaccgatacttaatggataatctgtttaaatacgttatcggctccctagaattattaat
agcggagagctatatgattgtttatctaaacggggcaaccacccggcggaagatgcccagtttaggttggctcaggaagt
gttaccagcaaattgacaggaggctaaggaaaaacctgaagtcactaataatagttcatccttcctggttcattagaaca
cttctggcaatcacaaagccatttattagctcaaaattcagccaaaaaatcagatacgtctttaccttggcagagctggc
agagctcattcccatggacagcgttaccatccccgaatgcataaaacggtatgaagaagaaaaatttaaaaagaaactcc
aaagaattgatcaagaacttaatgggaaacaggagcagacgtctgaacagtaaaaaaaaaaaagtgtttttgaattcaag
ccgagagtgaagaacatgctgggagatttgaggtcctgaagaacgctctggccttctgcgtccagacttggcatgttgga
tgacgcactgctgagtgggtttgcaagtcccaggtgatgctgacacttcatagttgccttgattataacttttacactgc
agtgtcacaaaggcatcctaggaggggcacccatttttgtatcgcgatgcttattcagtaagtatttatatgcttcgacg
ttaaggagagagatcatatatatttttatgactcttcaacgcatattttataatgttcatctgcaaaaaaaaacaacacc
tctgagacacactagcccaccgatgacggttgtcatttatttaggaataaaatgcatgagaatttcttatttatggtgaa
atgcttcttggctaaggaagagagaaatgtaacttggttatctcctaggctagcaagatcctttgctgtttccactgtgg
gatgtgcctaaccctggagctgggtgtcctcagcacaaactcagttcagtccaggcccttctgggttgaaactccagtgt
ttcaactctctctgttgaatgttgggctggtggaggctggctggctctggatgcccagggagtgacttatttgggatatt
gggcgacatcccagagcagaacagtggtggcctccacccagtcttccccttgctaccatggagggtatctcggcccagct
tctgatgtgccttgctgctttgccgcccagccatgtggagcggagttccagaagacggtatcaggatgtgacactcaaga
gtagagaaagtgtatccagagttaagggcaaggagaacagctttgcctacggaggctgttctcaagggcccagcatcctg
ggtctctcgcaaagcttcccatctaaggtggaagaagaaggccaggtggtcattttgtactttggaaggcaaagctcttg
aaacagcgctttcccccagcactagattcactttatacacccttttttaaaggagatgtgtgtgtgtgtgttgcatgttt
tacctgtttagacgaaacagctgctttaagagcggccttctcaataaggttggggatgtgtcgtgtgcactaattcctag
cgggttaatcatcaaagccatagtggaatgtagcaggaacgttacgtttttggaaagcttgggcatcgctctttagaaat
attttcatttgtatttaaattttgtgcgtgttgttagcaacacagcgttttcatgttccccagtgtttatggggggaaaa
aataccgcccgtgtgttggtttataacccagtcaataaaatatttttaaataaaggcttta
Transcript IDhabu1_s878_g03127.t4
Definition-
>habu1_s878_g03127.t4
cgctccatttcctgaggaaaggaggaggctgcgtcctgcttcctgtttgctcacgtgtccttccggggcagggtcgccac
cttcgggaggggtcgttccggccggctgtgagagagaggcaccgcgctgagaagcatattttgtagctcctaacgtctcc
cacaacaattcggaactctggatcaagacggagttgcattagccctcgaggcaaagctgaggatggaaggagtggaagtt
aaagaggaatggcaagacgaagactttcccagacctttaccagaagatgaccatattgaagctatgtctgggccagctga
aagaggagaccaatccgaaattaatggcaacaaagttaagaagaaactaatagctccaaatataaacttgactttggatc
agagtgaagaatccattttatctgggttagaggcaagtggagatattgacttggatgatatagacaccccctccgagaac
agcaataatgagtttgagtgggaagatgaccttccaaagcagaaaagcagcgatgccgttcggaagggctccctgctgga
atacacagcatcggaagagaaggaggaggaacgacggtggcgaatgtaccagattggtgaccaaggtcaccgagtagaca
tgagggccattgagccctacaagaaagtgattagtcacggaggctattacggggatgggctgaatgcaattattgtcttt
gcggtttgcttcatgccagaaagtagtcagccaaactaccgatacttaatggataatctgtttaaatacgttatcggctc
cctagaattattaatagcggagagctatatgattgtttatctaaacggggcaaccacccggcggaagatgcccagtttag
gttggctcaggaagtgttaccagcaaattgacaggaggctaaggaaaaacctgaagtcactaataatagttcatccttcc
tggttcattagaacacttctggcaatcacaaagccatttattagctcaaaattcagccaaaaaatcagatacgtctttac
cttggcagagctggcagagctcattcccatggacagcgttaccatccccgaatgcataaaacggtatgaagaagaaaaat
ttaaaaagaaactccaaagaattgatcaagaacttaatgggaaacaggagcagacgtctgaacagtaaaaaaaaaaaagt
gtttttgaattcaagccgagagtgaagaacatgctgggagatttgaggtcctgaagaacgctctggccttctgcgtccag
acttggcatgttggatgacgcactgctgagtgggtttgcaagtcccaggtgatgctgacacttcatagttgccttgatta
taacttttacactgcagtgtcacaaaggcatcctaggaggggcacccatttttgtatcgcgatgcttattcagtaagtat
ttatatgcttcgacgttaaggagagagatcatatatatttttatgactcttcaacgcatattttataatgttcatctgca
aaaaaaaacaacacctctgagacacactagcccaccgatgacggttgtcatttatttaggaataaaatgcatgagaattt
cttatttatggtgaaatgcttcttggctaaggaagagagaaatgtaacttggttatctcctaggctagcaagatcctttg
ctgtttccactgtgggatgtgcctaaccctggagctgggtgtcctcagcacaaactcagttcagtccaggcccttctggg
ttgaaactccagtgtttcaactctctctgttgaatgttgggctggtggaggctggctggctctggatgcccagggagtga
cttatttgggatattgggcgacatcccagagcagaacagtggtggcctccacccagtcttccccttgctaccatggaggg
tatctcggcccagcttctgatgtgccttgctgctttgccgcccagccatgtggagcggagttccagaagacggtatcagg
atgtgacactcaagagtagagaaagtgtatccagagttaagggcaaggagaacagctttgcctacggaggctgttctcaa
gggcccagcatcctgggtctctcgcaaagcttcccatctaaggtggaagaagaaggccaggtggtcattttgtactttgg
aaggcaaagctcttgaaacagcgctttcccccagcactagattcactttatacacccttttttaaaggagatgtgtgtgt
gtgtgttgcatgttttacctgtttagacgaaacagctgctttaagagcggccttctcaataaggttggggatgtgtcgtg
tgcactaattcctagcgggttaatcatcaaagccatagtggaatgtagcaggaacgttacgtttttggaaagcttgggca
tcgctctttagaaatattttcatttgtatttaaattttgtgcgtgttgttagcaacacagcgttttcatgttccccagtg
tttatggggggaaaaaataccgcccgtgtgttggtttataacccagtcaataaaatatttttaaataaaggcttta

Protein
Protein IDhabu1_s878_g03127.t1
Definition-
>habu1_s878_g03127.t1
MEGVEVKEEWQDEDFPRPLPEDDHIEAMSGPAERGDQSEINGNKVKKKLIAPNINLTLDQSEESILSGLEASGDIDLDDI
DTPSENSNNEFEWEDDLPKQKSSDAVRKGSLLEYTASEEKEEERRWRMYQIGDQGHRVDMRAIEPYKKVISHGGYYGDGL
NAIIVFAVCFMPESSQPNYRYLMDNLFKYVIGSLELLIAESYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSL
IIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPMDSVTIPECIKRYEEEKFKKKLQRIDQELNGKQEQTSE
Q
Protein IDhabu1_s878_g03127.t2
Definition-
>habu1_s878_g03127.t2
MTILKLCLGQLKEETNPSEESILSGLEASGDIDLDDIDTPSENSNNEFEWEDDLPKQKSSDAVRKGSLLEYTASEEKEEE
RRWRMYQIGDQGHRVDMRAIEPYKKVISHGGYYGDGLNAIIVFAVCFMPESSQPNYRYLMDNLFKYVIGSLELLIAESYM
IVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPM
DSVTIPECIKRYEEEKFKKKLQRIDQELNGKQEQTSEQ
Protein IDhabu1_s878_g03127.t3
Definition-
>habu1_s878_g03127.t3
MEGVEVKEEWQDEDFPRPLPEDDHIEAMSGPAERGDQSEINGNKVKKKLIAPNINLTLDQSEESILSGLEASGDIDLDDI
DTPSENSNNEFEWEDDLPKQKSSDAVRKGSLLEYTASEEKEEERRWRMYQIGDQGHRVDMRAIEPYKKVISHGGYYGDGL
NAIIVFAVCFMPESSQPNYRYLMDNLFKYVIGSLELLIAESYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSL
IIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPMDSVTIPECIKRYEEEKFKKKLQRIDQELNGKQEQTSE
Q
Protein IDhabu1_s878_g03127.t4
Definition-
>habu1_s878_g03127.t4
MEGVEVKEEWQDEDFPRPLPEDDHIEAMSGPAERGDQSEINGNKVKKKLIAPNINLTLDQSEESILSGLEASGDIDLDDI
DTPSENSNNEFEWEDDLPKQKSSDAVRKGSLLEYTASEEKEEERRWRMYQIGDQGHRVDMRAIEPYKKVISHGGYYGDGL
NAIIVFAVCFMPESSQPNYRYLMDNLFKYVIGSLELLIAESYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSL
IIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPMDSVTIPECIKRYEEEKFKKKLQRIDQELNGKQEQTSE
Q

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Okinawa Institute of Science and Technology
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