Gene
| Gene Model ID | habu1_s878_g03128 |
|---|---|
| Locus | habu1_scaffold878 : 967573 ... 971880 : + |
| To GenomeBrowser | habu1_scaffold878:967573..971880 |
| Genes list of scaffold | habu1_scaffold878 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription initiation factor iia subunit 2 | GO:0001103 GO:0003713 GO:0003743 GO:0005672 GO:0005840 GO:0006446 GO:0017025 GO:0030054 GO:0042803 GO:0045941 GO:0045944 GO:0046982 GO:0051091 GO:0051123 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03128.t2 | 1 | 1 | TFIIA_gamma_N | 1 | 49 | 3.5e-24 | 84.1 | 6.5e-28 | 4.9e-24 | 83.6 |
| habu1_s878_g03128.t2 | 1 | 1 | TFIIA_gamma_C | 51 | 100 | 4.8e-24 | 83.9 | 9.2e-28 | 6.8e-24 | 83.4 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 40.8 |
| Venom grand-1 | 82.0 |
| Pit, infrared sensing | 45.5 |
| Nose | 35.6 |
| Brain-1 | 19.1 |
| Eye | 38.9 |
| fetal fibroblast | 101.7 |
| venom gland-2 | 90.4 |
| Brain-2 | 22.6 |
| Spleen | 63.3 |
| Lung | 40.7 |
| Liver | 121.9 |
| Kidney | 109.5 |
| Pancreas | 135.8 |
| Small intestine | 62.3 |
| Large intestine | 51.9 |
| Stomach | 115.9 |
| heart | 76.3 |
| ovary | 162.7 |
| cheek muscle | 226.0 |
Transcript
| Transcript ID | habu1_s878_g03128.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03128.t1 ttctgtcaagcaaagtctgggggaagccagtttcacttaacgacggtattgctaacttaataactgagatgattcactta atatctacagcaagaaaggtcgtacaatggggcaaaactcacttaacaaatgtctcactgggcaacagaaatcttgggct gtattgtggtcgtaaactgagaactacctataatttgaagagcagggtgtaggcagggtttaatcagcaaggaagctaaa tggtgtttggttcttttatgtggtttttattataatgtgtgttttgtgaggaaaaaggaactttttcttgaactggctgg aagctctcttatctcaggctctgcgttgcgtccattatccatccttcagccagaataactgttaccctggattttccaga tctttggtgaaagtttcagatctgtggatgatcagcatctatcatggcttaccaactgtatagaaacaccaccctgggaa acagtcttcaagaaagcctggatgagctcattcagtctcagcagatcactccccagctcgctcttcaagtcctcctacag tttgacaaagctatcaatgctgcattagcacagcgggtcagaaacagagtcaatttcaggggctctctgaatacgtacag gttttgcgacaatgtttggaccttcgtactgaacgatgtggaattcagagaggtcaccgaggtggtgaaagtggataaag ttaaaatcgtggcctgcgatgggaaaaatacgggttcgaatgctgcggagtgaagggggattggggcctctgagcccacg cggatgtgatgggcagggcttcccagggagcagcctggacaaagaaagactctgtcgggagttgttttaataatgtaggc aaagctcactttttctggaaggccttgtggaactgtcttagcaaggtcccataaggcacctccgggcgttgggtcggtga tgaagataagcaagcttgcttttttaaaaaaagaggatcaaaaataaggatgaaacatacacagctacttttgggttcat caaggtcaccaataaatattttatttaaaacttttagt |
|
| Transcript ID | habu1_s878_g03128.t2 |
| Definition | - |
>habu1_s878_g03128.t2 atccttcagccagaataactgttaccctggattttccagatctttggtgaaagtttcagatctgtggatgatcagcatct atcatggcttaccaactgtatagaaacaccaccctgggaaacagtcttcaagaaagcctggatgagctcattcagtctca gcagatcactccccagctcgctcttcaagtcctcctacagtttgacaaagctatcaatgctgcattagcacagcgggtca gaaacagagtcaatttcaggggctctctgaatacgtacaggttttgcgacaatgtttggaccttcgtactgaacgatgtg gaattcagagaggtcaccgaggtggtgaaagtggataaagttaaaatcgtggcctgcgatgggaaaaatacgggttcgaa tgctgcggagtgaagggggattggggcctctgagcccacgcggatgtgatgggcagggcttcccagggagcagcctggac aaagaaagactctgtcgggagttgttttaataatgtaggcaaagctcactttttctggaaggccttgtggaactgtctta gcaaggtcccataaggcacctccgggcgttgggtcggtgatgaagataagcaagcttgcttttttaaaaaaagaggatca aaaataaggatgaaacatacacagctacttttgggttcatcaaggtcaccaataaatattttatttaaaacttttagt |
|
Protein
| Protein ID | habu1_s878_g03128.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03128.t1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVE FREVTEVVKVDKVKIVACDGKNTGSNAAE |
|
| Protein ID | habu1_s878_g03128.t2 |
| Definition | - |
>habu1_s878_g03128.t2 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVE FREVTEVVKVDKVKIVACDGKNTGSNAAE |
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