Gene
| Gene Model ID | habu1_s878_g03131 |
|---|---|
| Locus | habu1_scaffold878 : 1025993 ... 1066452 : - |
| To GenomeBrowser | habu1_scaffold878:1025993..1066452 |
| Genes list of scaffold | habu1_scaffold878 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| krueppel-like factor 13 | GO:0003677 GO:0008285 GO:0045647 GO:0045944 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03131.t1 | 3 | 1 | zf-C2H2 | 142 | 166 | 5.2e-13 | 48.4 | 4.6e-06 | 0.011 | 15.9 |
| habu1_s878_g03131.t1 | 2 | 1 | zf-H2C2_2 | 158 | 184 | 4.1e-14 | 52.0 | 4.9e-11 | 1.2e-07 | 31.6 |
| habu1_s878_g03131.t1 | 3 | 2 | zf-C2H2 | 172 | 196 | 5.2e-13 | 48.4 | 8.4e-08 | 0.00021 | 21.4 |
| habu1_s878_g03131.t1 | 2 | 1 | zf-C2H2_4 | 172 | 196 | 7.9e-10 | 38.3 | 6.6e-07 | 0.0016 | 18.5 |
| habu1_s878_g03131.t1 | 2 | 2 | zf-H2C2_2 | 189 | 211 | 4.1e-14 | 52.0 | 1.6e-11 | 4.0e-08 | 33.1 |
| habu1_s878_g03131.t1 | 3 | 3 | zf-C2H2 | 202 | 224 | 5.2e-13 | 48.4 | 1.0e-07 | 0.00026 | 21.1 |
| habu1_s878_g03131.t1 | 2 | 2 | zf-C2H2_4 | 202 | 224 | 7.9e-10 | 38.3 | 4.6e-07 | 0.0011 | 19.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s878_g03131.t1 | gi|558225220|ref|XP_006136922.1| | PREDICTED: Krueppel-like factor 13 isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s878_g03131.t1 | gi|543353771|ref|XP_005521503.1| | PREDICTED: Krueppel-like factor 13 [Pseudopodoces humilis] | 0.0 |
| habu1_s878_g03131.t1 | gi|542163355|ref|XP_005490325.1| | PREDICTED: Krueppel-like factor 13 [Zonotrichia albicollis] | 0.0 |
| habu1_s878_g03131.t1 | gi|683911552|ref|XP_009088107.1| | PREDICTED: Krueppel-like factor 13 [Serinus canaria] | 0.0 |
| habu1_s878_g03131.t1 | gi|50752895|ref|XP_425065.1| | PREDICTED: Kruppel-like factor 13 [Gallus gallus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.6 |
| Venom grand-1 | 1.2 |
| Pit, infrared sensing | 3.1 |
| Nose | 2.5 |
| Brain-1 | 0.6 |
| Eye | 1.6 |
| fetal fibroblast | 2.0 |
| venom gland-2 | 0.9 |
| Brain-2 | 0.4 |
| Spleen | 2.5 |
| Lung | 2.5 |
| Liver | 0.0 |
| Kidney | 1.7 |
| Pancreas | 1.2 |
| Small intestine | 2.1 |
| Large intestine | 3.5 |
| Stomach | 1.7 |
| heart | 1.5 |
| ovary | 0.4 |
| cheek muscle | 2.3 |
Transcript
| Transcript ID | habu1_s878_g03131.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03131.t1 ccagctgttctgcagggggtttgcctttcttgatgttctcactggatgcctttcctcttgagaaagagggcaacggggtg tgacttcttgtgaaagctgctctcttctcttctgcaaggaaggtgcccctgccaagcgtctagaggtgttttttgttggt ggaaaagagcggagtggatttgtgcaccccaagaggtgtgaaaaatggccacagctgcctactttgccgccgagtgcctt gtctccatgtccagccgggcaatcatccatggtcctgctgaaggaccaagacttccacctgttgggacggcttctgccct cacggacttgactcccaaggagaaacctgaagggaaggaggcaggaagagacaatggagggggcacctcagtgtacgccg tggccagcatcttggctgacttaaaccaacatcttccaaagtcttcctcgcttcagctggagaagggtcagaggatggag cgaaaggaggaaggcaaaccccctcttccgcagggagcgcttggccaagaccagatcctgccagccagcaagtgtggagg agaaagagcagccacacctaccaacttggcggcagtcaatgagcccagcccgaaacaaaggagcaggagaggacggtgcc agcttgaccctgaattacctcagaaaaaacacaaatgccactatgtgggatgtgaaaaggtttacggcaagtcttctcat ctgaaagctcacctgaggacccacacaggcgagaggccgttcgaatgccgctgggaagactgcaacaagaagtttgcccg ttccgatgagctggcccggcacttccgcactcacacgggcgagaagaagttctcctgccccctctgcgaaaagcgcttca tgcggagcgaccacctcaccaagcacgcccgccgccatgccaacttccaccctaacatgctcaagagaaggagtggctgc agctccaggacggggtctctgagtgactatagccgggtaggtcctccaaggcagatggatggacccagaaggatgggaat gcttccaaaagcctggacttttatcaacgtggatggaagctttgaagatcatcttccaccgctggatgggaagccacaca aaagggtggtgaagttcatagatcgcaaggggaccaagacaagtttcctcaggggccagcttctattctgcaagaactcc gtaaattttgccagaccttcaaagctagacggccgtaccttaactgaagaagcttcttggatgagaagtgaaacatcttc aaggaaagacagactctctccagttgcctcttgaaaaagcacctttgggttcatctacagaagtattcataggaatagtg aaggctgttcctttaccattgcatcagtaataataaatatttgcttaactcaccctccc |
|
Protein
| Protein ID | habu1_s878_g03131.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03131.t1 MSSRAIIHGPAEGPRLPPVGTASALTDLTPKEKPEGKEAGRDNGGGTSVYAVASILADLNQHLPKSSSLQLEKGQRMERK EEGKPPLPQGALGQDQILPASKCGGERAATPTNLAAVNEPSPKQRSRRGRCQLDPELPQKKHKCHYVGCEKVYGKSSHLK AHLRTHTGERPFECRWEDCNKKFARSDELARHFRTHTGEKKFSCPLCEKRFMRSDHLTKHARRHANFHPNMLKRRSGCSS RTGSLSDYSRVGPPRQMDGPRRMGMLPKAWTFINVDGSFEDHLPPLDGKPHKRVVKFIDRKGTKTSFLRGQLLFCKNSVN FARPSKLDGRTLTEEASWMRSETSSRKDRLSPVAS |
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