Gene
| Gene Model ID | habu1_s878_g03136 |
|---|---|
| Locus | habu1_scaffold878 : 1220550 ... 1268952 : - |
| To GenomeBrowser | habu1_scaffold878:1220550..1268952 |
| Genes list of scaffold | habu1_scaffold878 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03136.t2 | 1 | 1 | CD20 | 33 | 155 | 9.5e-12 | 45.0 | 2.5e-15 | 1.8e-11 | 44.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s878_g03136.t2 | gi|701378281|ref|XP_009992824.1| | PREDICTED: protein FAM189A1 [Chaetura pelagica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.5 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.5 |
| Nose | 3.5 |
| Brain-1 | 7.8 |
| Eye | 1.7 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.1 |
| Brain-2 | 6.8 |
| Spleen | 0.8 |
| Lung | 0.8 |
| Liver | 4.4 |
| Kidney | 0.0 |
| Pancreas | 0.1 |
| Small intestine | 0.1 |
| Large intestine | 0.2 |
| Stomach | 0.2 |
| heart | 0.6 |
| ovary | 1.1 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s878_g03136.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03136.t1 aggactttccctgcccgggagcgccgcacatgcatggttccgccccctgtgctggccgaggcatagctggcaagcggcag agacggagcaggctgaccaccatctggcccagcccaagggaggtgctgctgtccgggctgatcggtgtggtctcttggaa aaggcccctgtcccttgtgataacttttttcatgttgctgtcagcagtctgcgtgatgctgaatttagctgggtccattc tctcctgtcaaaatgctcaactagtgaattctctagaagggtgtcagttgattaaattcgacagtgacagtgtctgtgtg tgctgtgagttgcaacaccagacttcgggctgcagccttggggagatgttgaaattgaacccactgcaggagtgcaacac ggtcaggttgaccctcaaggacctgctgtttagtgtttgcgctctcaatatcatctccaccattgtgtgtgcgttggcaa cggcgatgtgctgcatgcagatggtctcgtccgatgttctgcaaatgttcttgccgcagaggtctcattctgccaatccg gattgcatgagccctcatgggactatcctgcatcagacgttggactttgacgagtttattcctccaatccccccgccacc ttattacccaccggaatatacctgcacaccagccgcggagacgcaaagggctttccacctggattttccacattcgccct tcaacgcgttatacgaggtgaccatcaacagccctgggattctatacccagccgagctgcctcccccttacgaggcggtt gtcggacaagcttcaactaaccaggtcaccagtatggaacagcaaatcacggagtccaacttgggagagcgaaatgcagc aacaggtttccacagccatcggtctccaggtggtcttgtaggaagagaggcaagaaacagaagttgctccagcctgaaca atcgcaagttaacccagacttgcttgccggactctccagacgatgaggtcagtggccacagccagaccactgtggaccgg cctcgtagcaggacgtgctcttatagccggctgtcggactgttcctcagagagcgttggtgtttctgagagagactcttt tggcttggccagagaagacaaagccaccccctcatctaagccactgaagatgtgctgtggggtcttcagccagccagctg ccccacagactccttgcacccactgctcagtgcctgtaaacagtttgccccacagatgcctcaagaggacggcccaacag cgggcaaggaaaaacgccatttgcaacattgtccgatccactagtgaccctttatcctgttcagctactacagaagttcc tgtgtctagtcctcacgtggctgcctctacttgccaggactccaggaaccatcttgtgccaaccggaaaaccaagggacc ccccaaaagccgaactttcccagaagccaaaagtcatcctgagcatctgcaaagagcggccccactccttggtggaccta caggcctacaaggacactaagattctggtggccaaatttttggaacattcgaactgcaacttgaccccagaagtgcgcca cgtggtcaacaggatccggtctgtcatcaagtctgatgaacggtacatggaagaagccatctttagtgccaacatcattg atcaggtcatcatgggctcccagcagaatgtggatacctcaagaaagcggcttcaggaagacctccatctccagagctgt ggagccctaagctctcccgttgccttcttacgcagggcccccgtcactcatgcctttgaaagaggaagaccccacagttt aattgaagtgtgccgagagaccatcctttgacaatgagccttttgctccgctgaggaatacaaactctgcaaaagagatt gtgaggaaccaggtaatggatggagattcatcccctccatggctgtctttgaaaaagcaaacggaaactcaaccagtgtc tctgaaagagtcttcctcttgtagaggtccacactagatttttattcccaggtctgagcgctcaactcttcatgactgaa tattcaaccatgactcttttatgaaaaacaaattgcttcttatttaacaatgaaacaaacaaaaaacccaccgaagcata tctttttctcctcctaccaaggaatttggttttctaagttctaaggggtatgtctggggagtaagggagagtggggtggg ctggggcagagtggggtgtggcgagggaaggaaataaactttcttgctaagctgcagtga |
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| Transcript ID | habu1_s878_g03136.t2 |
| Definition | - |
>habu1_s878_g03136.t2 aggactttccctgcccgggagcgccgcacatgcatggttccgccccctgtgctggccgaggcatagctggcaagcggcag agacggagcaggctgaccaccatctggcccagcccaagggaggtgctgctgtccgggctgatcggtgtggtctcttggaa aaggcccctgtcccttgtgataacttttttcatgttgctgtcagcagtctgcgtgatgctgaatttagctgggtccattc tctcctgtcaaaatgctcaactagtgaattctctagaagggtgtcagttgattaaattcgacagtgacagtgtctgtgtg tgctgtgagttgcaacaccagacttcgggctgcagccttggggagatgttgaaattgaacccactgcaggagtgcaacac ggtcaggttgaccctcaaggacctgctgtttagtgtttgcgctctcaatatcatctccaccattgtgtgtgcgttggcaa cggcgatgtgctgcatgcagatggtctcgtccgatgttctgcaaatgttcttgccgcagaggtctcattctgccaatccg gattgcatgagccctcatgggactatcctgcatcagacgttggactttgacgagtttattcctccaatccccccgccacc ttattacccaccggaatatacctgcacaccagccgcggagacgcaaagggctttccacctggattttccacattcgccct tcaacgcgttatacgaggtgaccatcaacagccctgggattctatacccagccgagctgcctcccccttacgaggcggtt gtcggacaagcttcaactaaccaggtcaccagtatggaacagcaaatcacggagtccaacttgggagagcgaaatgcagc aacaggtttccacagccatcggtctccaggtggtcttgtaggaagagaggcaagaaacagaagttgctccagcctgaaca atcgcaagttaacccagacttgcttgccggactctccagacgatgaggtcagtggccacagccagaccactgtggaccgg cctcgtagcaggacgtgctcttatagccggctgtcggactgttcctcagagagcgttggtgtttctgagagagactcttt tggcttggccagagaagacaaagccaccccctcatctaagccactgaagatgtgctatgcctcaagaggacggcccaaca gcgggcaaggaaaaacgccatttgcaacattgtccgatccactagtgaccctttatcctgttcagctactacagaaggac tccaggaaccatcttgtgccaaccggaaaaccaagggaccccccaaaagccgaactttcccagaagccaaaagtcatcct gagcatctgcaaagagcggccccactccttggtggacctacaggcctacaaggacactaagattctggtggccaaatttt tggaacattcgaactgcaacttgaccccagaagtgcgccacgtggtcaacaggatccggtctgtcatcaagtctgatgaa cggtacatggaagaagccatctttagtgccaacatcattgatcaggtcatcatgggctcccagcagaatgtggatacctc aagaaagcggcttcaggaagacctccatctccagagctgtggagccctaagctctcccgttgccttcttacgcagggccc ccgtcactcatgcctttgaaagaggaagaccccacagtttaattgaagtgtgccgagagaccatcctttgacaatgagcc ttttgctccgctgaggaatacaaactctgcaaaagagattgtgaggaaccaggtaatggatggagattcatcccctccat ggctgtctttgaaaaagcaaacggaaactcaaccagtgtctctgaaagagtcttcctcttgtagaggtccacactagatt tttattcccaggtctgagcgctcaactcttcatgactgaatattcaaccatgactcttttatgaaaaacaaattgcttct tatttaacaatgaaacaaacaaaaaacccaccgaagcatatctttttctcctcctaccaaggaatttggttttctaagtt ctaaggggtatgtctggggagtaagggagagtggggtgggctggggcagagtggggtgtggcgagggaaggaaataaact ttcttgctaagctgcagtga |
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Protein
| Protein ID | habu1_s878_g03136.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03136.t1 MHGSAPCAGRGIAGKRQRRSRLTTIWPSPREVLLSGLIGVVSWKRPLSLVITFFMLLSAVCVMLNLAGSILSCQNAQLVN SLEGCQLIKFDSDSVCVCCELQHQTSGCSLGEMLKLNPLQECNTVRLTLKDLLFSVCALNIISTIVCALATAMCCMQMVS SDVLQMFLPQRSHSANPDCMSPHGTILHQTLDFDEFIPPIPPPPYYPPEYTCTPAAETQRAFHLDFPHSPFNALYEVTIN SPGILYPAELPPPYEAVVGQASTNQVTSMEQQITESNLGERNAATGFHSHRSPGGLVGREARNRSCSSLNNRKLTQTCLP DSPDDEVSGHSQTTVDRPRSRTCSYSRLSDCSSESVGVSERDSFGLAREDKATPSSKPLKMCCGVFSQPAAPQTPCTHCS VPVNSLPHRCLKRTAQQRARKNAICNIVRSTSDPLSCSATTEVPVSSPHVAASTCQDSRNHLVPTGKPRDPPKAELSQKP KVILSICKERPHSLVDLQAYKDTKILVAKFLEHSNCNLTPEVRHVVNRIRSVIKSDERYMEEAIFSANIIDQVIMGSQQN VDTSRKRLQEDLHLQSCGALSSPVAFLRRAPVTHAFERGRPHSLIEVCRETIL |
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| Protein ID | habu1_s878_g03136.t2 |
| Definition | - |
>habu1_s878_g03136.t2 MHGSAPCAGRGIAGKRQRRSRLTTIWPSPREVLLSGLIGVVSWKRPLSLVITFFMLLSAVCVMLNLAGSILSCQNAQLVN SLEGCQLIKFDSDSVCVCCELQHQTSGCSLGEMLKLNPLQECNTVRLTLKDLLFSVCALNIISTIVCALATAMCCMQMVS SDVLQMFLPQRSHSANPDCMSPHGTILHQTLDFDEFIPPIPPPPYYPPEYTCTPAAETQRAFHLDFPHSPFNALYEVTIN SPGILYPAELPPPYEAVVGQASTNQVTSMEQQITESNLGERNAATGFHSHRSPGGLVGREARNRSCSSLNNRKLTQTCLP DSPDDEVSGHSQTTVDRPRSRTCSYSRLSDCSSESVGVSERDSFGLAREDKATPSSKPLKMCYASRGRPNSGQGKTPFAT LSDPLVTLYPVQLLQKDSRNHLVPTGKPRDPPKAELSQKPKVILSICKERPHSLVDLQAYKDTKILVAKFLEHSNCNLTP EVRHVVNRIRSVIKSDERYMEEAIFSANIIDQVIMGSQQNVDTSRKRLQEDLHLQSCGALSSPVAFLRRAPVTHAFERGR PHSLIEVCRETIL |
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