Gene
| Gene Model ID | habu1_s878_g03140 |
|---|---|
| Locus | habu1_scaffold878 : 1440769 ... 1444752 : - |
| To GenomeBrowser | habu1_scaffold878:1440769..1444752 |
| Genes list of scaffold | habu1_scaffold878 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03140.t1 | 1 | 1 | TM2 | 192 | 238 | 1.8e-14 | 53.6 | 2.2e-18 | 3.2e-14 | 52.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s878_g03140.t1 | gi|602635442|ref|XP_007424587.1| | PREDICTED: TM2 domain-containing protein 3-like [Python bivittatus] | 0.0 |
| habu1_s878_g03140.t1 | gi|637361464|ref|XP_008120288.1| | PREDICTED: TM2 domain-containing protein 3 [Anolis carolinensis] | 0.0 |
| habu1_s878_g03140.t1 | gi|648216286|ref|NP_001280156.1| | TM2 domain-containing protein 3 isoform 2 [Gallus gallus] | 0.0 |
| habu1_s878_g03140.t1 | gi|648216284|ref|NP_001280155.1| | TM2 domain-containing protein 3 isoform 1 [Gallus gallus] | 0.0 |
| habu1_s878_g03140.t1 | gi|530582372|ref|XP_005285032.1| | PREDICTED: TM2 domain-containing protein 3 isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.1 |
| Venom grand-1 | 11.4 |
| Pit, infrared sensing | 6.5 |
| Nose | 7.2 |
| Brain-1 | 4.3 |
| Eye | 6.1 |
| fetal fibroblast | 12.3 |
| venom gland-2 | 13.6 |
| Brain-2 | 4.1 |
| Spleen | 6.2 |
| Lung | 9.2 |
| Liver | 5.8 |
| Kidney | 5.6 |
| Pancreas | 7.6 |
| Small intestine | 5.5 |
| Large intestine | 6.3 |
| Stomach | 5.8 |
| heart | 6.7 |
| ovary | 68.9 |
| cheek muscle | 6.0 |
Transcript
| Transcript ID | habu1_s878_g03140.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03140.t1 gtcactgaggtccagaaaggaacgcccaacaacccgaacgccttctttctctcactctcactctgtcccgcgcaggcgca gagccgcggcttgccgctgctccgcctccttctggcccgtttccgagggagaggagggggcggagccaggcgcagtcccc ggatgagggcaagatggcggcggtggggctgggtgtgttgcgggcgctgaagcggctctgctgcgtggccgttttcctct cgcagctctacgtcctctccggccgggggtcgctgagcttggagcattctcatccacaggcttcgctctcaaagattgcc ggggtcccttcgagcacccacatcccagcatccaaagtgccagcagagggcacctcagttccaacttatgtgacccaatg tcccagtaatgggatttgtaaccgactacctccggaatgtgtgatctgtagaacaaactattcttgtatctatggcaagc cagttgcgtttgaatgtgaagtcaaaccccaggtccattgtgttgatcaaaataacaatcctcagaagactttcttgatt aacatgacttgccaattttgctggcagctgccaccctcaagctacctttgctccaatccgaacaactgcaagacagtctc gtgcccacgacaacgctatatggccaattgcactgtgaaagaccacatccattgtctaggaaaccgtacttttcccaaga tgctctattgcaactggactggaggctacaaatggtcaacagccttggccttaagcatcacgctcggtggctttggtgca gaccggttctacctgggacagtggcgggaggggcttggcaaactcttcagttttggtggtctggggatctggacgctgat agatgtgctcctgattggagttgggtacgtgggtcccacagacggttcgctctacatctaaccatcgaaacaatcaggtg gatcaccctgagaaattcacagatcggacttgaatgatctatctggaattgcttgcacgtctgtttaatgtacagtatct gtacttggtctgcctttatttttaaggcaaaataaatgagttgtggatgcttggctgg |
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Protein
| Protein ID | habu1_s878_g03140.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03140.t1 MAAVGLGVLRALKRLCCVAVFLSQLYVLSGRGSLSLEHSHPQASLSKIAGVPSSTHIPASKVPAEGTSVPTYVTQCPSNG ICNRLPPECVICRTNYSCIYGKPVAFECEVKPQVHCVDQNNNPQKTFLINMTCQFCWQLPPSSYLCSNPNNCKTVSCPRQ RYMANCTVKDHIHCLGNRTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLL IGVGYVGPTDGSLYI |
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