Gene
| Gene Model ID | habu1_s878_g03142 |
|---|---|
| Locus | habu1_scaffold878 : 1450924 ... 1460422 : - |
| To GenomeBrowser | habu1_scaffold878:1450924..1460422 |
| Genes list of scaffold | habu1_scaffold878 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03142.t1 | 1 | 1 | La | 74 | 133 | 9.8e-22 | 76.5 | 3.5e-25 | 1.7e-21 | 75.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s878_g03142.t1 | gi|602635462|ref|XP_007424597.1| | PREDICTED: la-related protein 6-like [Python bivittatus] | 0.0 |
| habu1_s878_g03142.t1 | gi|363737904|ref|XP_413777.3| | PREDICTED: la-related protein 6 [Gallus gallus] | 0.0 |
| habu1_s878_g03142.t1 | gi|557269586|ref|XP_006020100.1| | PREDICTED: la-related protein 6-like [Alligator sinensis] | 0.0 |
| habu1_s878_g03142.t1 | gi|564259904|ref|XP_006268870.1| | PREDICTED: la-related protein 6-like [Alligator mississippiensis] | 0.0 |
| habu1_s878_g03142.t1 | gi|530582359|ref|XP_005285026.1| | PREDICTED: la-related protein 6 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.6 |
| Venom grand-1 | 0.5 |
| Pit, infrared sensing | 3.7 |
| Nose | 1.2 |
| Brain-1 | 1.8 |
| Eye | 1.1 |
| fetal fibroblast | 5.2 |
| venom gland-2 | 0.4 |
| Brain-2 | 1.9 |
| Spleen | 0.5 |
| Lung | 1.6 |
| Liver | 0.9 |
| Kidney | 0.7 |
| Pancreas | 0.7 |
| Small intestine | 0.2 |
| Large intestine | 0.9 |
| Stomach | 0.5 |
| heart | 0.6 |
| ovary | 2.1 |
| cheek muscle | 1.0 |
Transcript
| Transcript ID | habu1_s878_g03142.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03142.t1 cacgtgcagggaggggaggggggtccccgcctgcccagcccggcccagcctcggaggcggagcgcggcgggggcgggggc ggaggcgggggcgggcgggctggctgactggccggagagccgcagcgccagggccgggctggagcatggcggagccggag cgagcggcgggaccggtgcagatccgggtggccgaagcggaggagaacgagccgcggtgtccgagcccaccgggcggcgg cagctgcagcgaagacgatttcgggcggggcggcagcagttttggagagagcaaatccagtgagaatgatggggatgact cgtcccccgcttggaagccccccgagcacgctctgatcctgaagctggtggctcaggtagaatattatttctccgatgat aatcttgagaaagacgctttcctcctgaagcacatccggcggaacaagatggggtacgtcagtgtgaagctgctgacctc gttcaaaaagatcaaacagctgactcgggactggagggccacagcttatgctctgaaatattccaaccttctggagatga acgaagatggccgaaaagttcgccgaagcaccgccgttccggtgttcccgggtgaaaacctccctagccggatgcttctc gtctacgatatctccccaacccaagatccgcaccctgtggatgaaggacaggagaacggacaaatccgagagaaggtcat ggagcatctcctcagggccttcatccagtttggtgtcatcatgtctgtccggattctcaagcccgggagggaccttccac cggatatcaagaagttcagtggccgttacagcccggtgggaactcaagaatgcgccatcgttgagttcgaagaggtagag gctgccgtcaaagctcacgagtcgttctgcaccacggacaaagccgccatgaaggtcatcctcattggcacgaagcctcc aaagaagaaggtcctcaaggagaaaaaacaggacaaaaactctgccaaggatccagccaagacccgttcgatgaatagga gagtcgaggagcttcaagacgtgggtgaagacttgtcagccaacagctcctcggatcaagagagtgatccgacgtctccc atcccgaggagaagcagctcctccaacagaccacttctccctccttacgccattgctcctgactacacctctgatagacc tccgtatctctttattcccagtcctattatagacaactacggttacatgagagaagcaattaaacaacggggagcaatga tccttgataagactcaggagacaggacccggccctgcttgggaacaaaagtggattaattacgtcaacgttgtcaactcc atcaagccttggagagcagccgggaaaccattcggattaggctgaccaccctgctgaaagacggcttgcaaagtataccc agggttaactgaaccatggttaggcatccagaaaggcagatctagtttagcctctgctttgggtgaatctacatattgcc cacctacccaattggacacatttttgttacacccccttcccccaaaaatatcattggggaaaggaaagaaatccgcagag cagccttatcacgaaccgttcagagtcataaatatgataataatcatcatattt |
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Protein
| Protein ID | habu1_s878_g03142.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03142.t1 MAEPERAAGPVQIRVAEAEENEPRCPSPPGGGSCSEDDFGRGGSSFGESKSSENDGDDSSPAWKPPEHALILKLVAQVEY YFSDDNLEKDAFLLKHIRRNKMGYVSVKLLTSFKKIKQLTRDWRATAYALKYSNLLEMNEDGRKVRRSTAVPVFPGENLP SRMLLVYDISPTQDPHPVDEGQENGQIREKVMEHLLRAFIQFGVIMSVRILKPGRDLPPDIKKFSGRYSPVGTQECAIVE FEEVEAAVKAHESFCTTDKAAMKVILIGTKPPKKKVLKEKKQDKNSAKDPAKTRSMNRRVEELQDVGEDLSANSSSDQES DPTSPIPRRSSSSNRPLLPPYAIAPDYTSDRPPYLFIPSPIIDNYGYMREAIKQRGAMILDKTQETGPGPAWEQKWINYV NVVNSIKPWRAAGKPFGLG |
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