Gene
Gene Model ID | habu1_s878_g03146 |
---|---|
Locus | habu1_scaffold878 : 1795431 ... 1803280 : + |
To GenomeBrowser | habu1_scaffold878:1795431..1803280 |
Genes list of scaffold | habu1_scaffold878 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s878_g03146.t1 | 1 | 1 | SH2 | 52 | 127 | 9.3e-15 | 54.1 | 1.2e-18 | 1.8e-14 | 53.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
habu1_s878_g03146.t1 | gi|530605635|ref|XP_005294541.1| | PREDICTED: SH2 domain-containing protein 7 [Chrysemys picta bellii] | 0.0 |
habu1_s878_g03146.t1 | gi|558134098|ref|XP_006117024.1| | PREDICTED: SH2 domain-containing protein 7 [Pelodiscus sinensis] | 0.0 |
habu1_s878_g03146.t1 | gi|591387979|ref|XP_007068403.1| | PREDICTED: SH2 domain-containing protein 7 [Chelonia mydas] | 0.0 |
habu1_s878_g03146.t1 | gi|557289285|ref|XP_006027288.1| | PREDICTED: SH2 domain-containing protein 7 [Alligator sinensis] | 0.0 |
habu1_s878_g03146.t1 | gi|697502202|ref|XP_009679928.1| | PREDICTED: SH2 domain-containing protein 7 [Struthio camelus australis] | 0.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 0.0 |
Venom grand-1 | 0.0 |
Pit, infrared sensing | 0.0 |
Nose | 0.1 |
Brain-1 | 0.0 |
Eye | 0.0 |
fetal fibroblast | 0.0 |
venom gland-2 | 0.0 |
Brain-2 | 0.0 |
Spleen | 0.0 |
Lung | 0.1 |
Liver | 0.0 |
Kidney | 0.0 |
Pancreas | 0.0 |
Small intestine | 0.4 |
Large intestine | 0.1 |
Stomach | 0.0 |
heart | 0.0 |
ovary | 0.0 |
cheek muscle | 0.0 |
Transcript
Transcript ID | habu1_s878_g03146.t1 |
---|---|
Definition | - |
>habu1_s878_g03146.t1 atgtcacgagtttgacatgtctgatctacaggatgtggcccaaaaaaggaagatgccaagaatgaacgactgcttagtgc agtatttctcaaccttggcaggatgcagaacgagccggggggacccccctcctcaggaaaaccatctcccctagaaaggg agaggcaaccatcggagatgcttaaagacctgatcttaagatggttcctggaaacccagactgatctcctgttgcaaggt ggcaggttaccagactggttccatggattcctgactagacaggaaaccgagatgctgctggaaaccagagagtttggctg cttcctgatcaggctgaacgaaagagccttcggctacatcctttcctaccgagggaaggatcggtgccgccattttgtca tcagctgccaccgcaatggccagtacgtcgtatccggagacactcggacgcatccaaatttggctgaactgatcagttat taccagaggtctgaaattcagccttttggagagagcctcacatcggcctgtcccaagctggaggagaaaagcatatatga tgaaatatcttcagatcgaagtccctgtgcagatgctccagcgccgagcaggagcccctctgccgatttgctggttacct ggagtaaatccaccaatcagccaggacatccaaggattccacctcaagaagagcagaagtcttgtttcaaagaatgtcag aattcaaagaaagatccagataccgtcccacctataccagacaggtcccgtttgctggagtctctgtctctggaagaaga gattgtagatgaaggaaccatgtattcggctgtgaagaagcctcctttagacaacaggggcttgggaaagtcaaaagagg ggtgcagaaattttggggacactaaggcaaaggaacctgaaggactgggccacggtcattcctctccttgccgaaggaag acaggaaccgtgtttggattgaccaagcaatcagacacaccattcaccatgaaagtgaatcctgcagagacagctcaacc agaaccaatttattctaggattacccttgaccaacccaaaagcttttggatatctgctgggccccacagtcatcagtctg cctttccatcatccaagaaatcagctgtctctaattatccgccttcaaaattatcttctatgctgctgaataaatccaaa tatttaatggagttccatgaatctcctcttgggatcaatctggggtctatgggcagcagagaacatggacaactaaacca gcccaagtcctggtttgaacccccaaaggaacccacggaggagaaggtctttcagctgaaaaaccaaccttctaccttac gggcggacaatacatctaatactcaggaatctttcaggtgggcaaaaagtgtcttccttggttcagaaaagcttcctaag gcttcactggccaagtccaaagggtcttatgatcagatctccacaaagtttggtcagtcctccaagattcacatcaaccc tgagagtctatatgaaaaaatacctgatccttacgcccagggctcctcaaccacaagtcaagccgcagctctggaggacc cctacgagcaaatcccctacctgccagggaaaagaatagaaggaaaagtcacccaaaagagcgagaagcccagaaggttc ctctttgcggagaagaaggccaaatcctgaaggcgccgatttggacggggctccaaaccgaaccgctctccccaaggcca ccactcaagaaccagaggcacagttgctacggaaaacaacccgccagggatgccacgggccctgaccagcctttgggtca cttctcctgccggccagcggccactcagctgaacggcccctttcagagagcttggacgttggacgttagactagctaggc tgtgaagagcagtatggacgggatgaggcccccaagggttgtacggtgactaaacagatttgtcaaattttgggggagaa tgtgtgaatctgaatggctcttttccctcaaaacaaaaaaaaacacagtccctatcgcctctttgcatggcttcttctgg gctaaaaatcagtgaataataataataacaataaccgccacaagccacacattttttcttctaataatttctaactcttt gtaacaatcactgtatcaccactgtcttatttctgtcctgttttgactggactgctgcacagggtccagagtggctttcc ctgacatgggcagccaaaataaatcgggtcgataaaacaaaacaa |
Protein
Protein ID | habu1_s878_g03146.t1 |
---|---|
Definition | - |
>habu1_s878_g03146.t1 MQNEPGGPPSSGKPSPLERERQPSEMLKDLILRWFLETQTDLLLQGGRLPDWFHGFLTRQETEMLLETREFGCFLIRLNE RAFGYILSYRGKDRCRHFVISCHRNGQYVVSGDTRTHPNLAELISYYQRSEIQPFGESLTSACPKLEEKSIYDEISSDRS PCADAPAPSRSPSADLLVTWSKSTNQPGHPRIPPQEEQKSCFKECQNSKKDPDTVPPIPDRSRLLESLSLEEEIVDEGTM YSAVKKPPLDNRGLGKSKEGCRNFGDTKAKEPEGLGHGHSSPCRRKTGTVFGLTKQSDTPFTMKVNPAETAQPEPIYSRI TLDQPKSFWISAGPHSHQSAFPSSKKSAVSNYPPSKLSSMLLNKSKYLMEFHESPLGINLGSMGSREHGQLNQPKSWFEP PKEPTEEKVFQLKNQPSTLRADNTSNTQESFRWAKSVFLGSEKLPKASLAKSKGSYDQISTKFGQSSKIHINPESLYEKI PDPYAQGSSTTSQAAALEDPYEQIPYLPGKRIEGKVTQKSEKPRRFLFAEKKAKS |