Gene
| Gene Model ID | habu1_s878_g03147 |
|---|---|
| Locus | habu1_scaffold878 : 1804214 ... 1822080 : - |
| To GenomeBrowser | habu1_scaffold878:1804214..1822080 |
| Genes list of scaffold | habu1_scaffold878 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calcium and integrin-binding family member 2 | GO:0001917 GO:0005178 GO:0005509 GO:0005927 GO:0007229 GO:0008305 GO:0031594 GO:0042383 GO:0045494 GO:0055074 GO:0072562 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03147.t1 | 1 | 1 | EF-hand_7 | 111 | 173 | 7.7e-13 | 48.3 | 6.6e-14 | 1.2e-10 | 41.3 |
| habu1_s878_g03147.t1 | 1 | 1 | EF-hand_1 | 149 | 175 | 1.0e-08 | 33.8 | 4.9e-08 | 9.0e-05 | 21.5 |
| habu1_s878_g03147.t1 | 1 | 1 | EF-hand_5 | 151 | 172 | 6.8e-06 | 25.1 | 5.4e-06 | 0.01 | 15.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s878_g03147.t1 | gi|701298137|ref|XP_010009391.1| | PREDICTED: calcium and integrin-binding family member 2 [Nestor notabilis] | 0.0 |
| habu1_s878_g03147.t1 | gi|675409173|ref|XP_008933105.1| | PREDICTED: calcium and integrin-binding family member 2 [Manacus vitellinus] | 0.0 |
| habu1_s878_g03147.t1 | gi|527254955|ref|XP_005145763.1| | PREDICTED: calcium and integrin-binding family member 2 [Melopsittacus undulatus] | 0.0 |
| habu1_s878_g03147.t1 | gi|50752795|ref|XP_413749.1| | PREDICTED: calcium and integrin-binding family member 2 isoform X6 [Gallus gallus] | 0.0 |
| habu1_s878_g03147.t1 | gi|699672681|ref|XP_009885022.1| | PREDICTED: calcium and integrin-binding family member 2 [Charadrius vociferus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 0.5 |
| Nose | 0.6 |
| Brain-1 | 2.5 |
| Eye | 0.7 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.0 |
| Brain-2 | 2.6 |
| Spleen | 0.3 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.1 |
| Pancreas | 0.4 |
| Small intestine | 0.1 |
| Large intestine | 0.0 |
| Stomach | 0.2 |
| heart | 0.1 |
| ovary | 0.4 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s878_g03147.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03147.t1 gactgccccgggctggcagcggattggtgggaagcgtggaggattacgccccgtcccacctccgcagagaccagggagga aggtgcctccttcgaaaatggggaacaagcaaaccatctttacagatgaacaattagacgcctatcaggattgcaccttc ttcacacgaaaggagatcctcaggttgcacggccgctaccacgaactggcaccaaacatggttcccatggattataccaa gaatccagatgttaaactccctctgcagctcatagagaacatgccagaactcaaggaaaaccccttcaggcagagaattg tccactctttctcagaggacccggaaggaagcctcagctttaatgactttgtcgacatgttttctgtacttagtgaaatg gctccccgggagctaaaagcaatttatgcctttaagatttacgattttaacaccgacaacttcatttgcaaatctgacct ggagcaaactctgaacaagttgaccaaagaagagctgaccaaggaggaggtcagcctggtgtgcgagaaggtcattgaag aagcggacatggatggagatgggaagcttggattctccgatttcgaaaacatgatttccaaagctccagatttcctcagc accttccacatacgaatctgaaatccatggggctgagccactggaagccaggctggctggctgacgtgttcttggctttc tcttctcttcctgaatgctgcagcaaaggactcaactgaatcctggcccagcagacgcaggactattttccaagatcttc ggaa |
|
Protein
| Protein ID | habu1_s878_g03147.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03147.t1 MGNKQTIFTDEQLDAYQDCTFFTRKEILRLHGRYHELAPNMVPMDYTKNPDVKLPLQLIENMPELKENPFRQRIVHSFSE DPEGSLSFNDFVDMFSVLSEMAPRELKAIYAFKIYDFNTDNFICKSDLEQTLNKLTKEELTKEEVSLVCEKVIEEADMDG DGKLGFSDFENMISKAPDFLSTFHIRI |
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