Gene
| Gene Model ID | habu1_s878_g03148 |
|---|---|
| Locus | habu1_scaffold878 : 1822121 ... 1827065 : + |
| To GenomeBrowser | habu1_scaffold878:1822121..1827065 |
| Genes list of scaffold | habu1_scaffold878 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| isocitrate dehydrogenase | EC:1.1.1.41 GO:0000287 GO:0004449 GO:0005634 GO:0005739 GO:0006099 GO:0051287 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03148.t2 | 1 | 1 | Iso_dh | 33 | 358 | 0.0 | 360.0 | 0.0 | 0.0 | 359.8 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 22.7 |
| Venom grand-1 | 15.9 |
| Pit, infrared sensing | 25.8 |
| Nose | 25.4 |
| Brain-1 | 26.1 |
| Eye | 22.6 |
| fetal fibroblast | 55.8 |
| venom gland-2 | 19.8 |
| Brain-2 | 28.3 |
| Spleen | 7.9 |
| Lung | 5.5 |
| Liver | 3.4 |
| Kidney | 16.8 |
| Pancreas | 6.9 |
| Small intestine | 15.0 |
| Large intestine | 12.8 |
| Stomach | 20.8 |
| heart | 97.7 |
| ovary | 45.6 |
| cheek muscle | 92.3 |
Transcript
| Transcript ID | habu1_s878_g03148.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03148.t1 gaggaggtggaagggtcgccacctccgctgccgccaccaccgctcccatcgccatggctacgtcctcctgggttccgaag ttcctgcgttttcttgaggggttcagaattcagaaacaggtgaccagaaattttgctagtactcctcagacggtaacact gatcccaggagatggtattggacctgaaatttctgctgctgtggtggagatttttgaaactgctaaggtccctgttcagt ttgaagaaagaatcgtgactgccatccaagggccaggagggaaatggatgataccacaagatgccaaagactctatggac aagaacaaaataggattaaaaggtcctctgaaaacacccatagctgctggccatccatccatgaatttactgctccgtaa aacatttgacttatatgcaaatatccgcccttgtgtgtccattgagggctacaagaccccttacacagatgtggacatcg tcaccatacgtgagaacacggaaggcgaatacagcggcattgagcacataattgttgatggtgttgtgcagagcattaaa ctcatcaccgaggacgcaagcaaacggattgctgactttgcttttgaatatgccaggaataatcagaggagcaaagttac ggctgtgcataaagctaatattatgcgtatgtctgatggtctgtttctgagaaaatgtagagaagcagcagaaaactgta aagatattaaatttaacgaaatgtacctcgacaccgtgtgtctgaatatggtgcaggatccatctcagtttgatgtcctg gtcatgccaaatttgtatggagacatacttagtgatctatgcgcgggcttaatcgggggtcttggtgtgactcctagtgg gaatattggtgctaacggagttgcaatctttgaatcggtacacggaacagctccggatattgccggaaaagacttagcca acccaacggcacttctcttgagtgctgtcatgatgttgcgtcacatggaaatgcaagactttgccatgaaaatagaaacg gcttgctttgagaccatcaaagaccagaaggtcttgaccaaagatttgggaggcaacgccaaatgttcagagttcaccgc agagatctgtcgcagagtcagagccatggaatagacgtcttctccgtgtcctcctgttttcaatcccccctaaaggatgc tgttatttattacatgtcagatccatttctcttctttttctagaaataaactcctttccatttccattgctt |
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| Transcript ID | habu1_s878_g03148.t2 |
| Definition | - |
>habu1_s878_g03148.t2 ggcgaggaggccgcggccgattccttcccttccgaccagcggcgtgagcgtcaagccgggtcgagccggcgaggaggtgg aagggtcgccacctccgctgccgccaccaccgctcccatcgccatggctacgtcctcctgggttccgaagttcctgcgtt ttcttgaggggttcagaattcagaaacaggtgaccagaaattttgctagtactcctcagacggtaacactgatcccagga gatggtattggacctgaaatttctgctgctgtggtggagatttttgaaactgctaaggtccctgttcagtttgaagaaag aatcgtgactgccatccaagggccaggagggaaatggatgataccacaagatgccaaagactctatggacaagaacaaaa taggattaaaaggtcctctgaaaacacccatagctgctggccatccatccatgaatttactgctccgtaaaacatttgac ttatatgcaaatatccgcccttgtgtgtccattgagggctacaagaccccttacacagatgtggacatcgtcaccatacg tgagaacacggaaggcgaatacagcggcattgagcacataattgttgatggtgttgtgcagagcattaaactcatcaccg aggacgcaagcaaacggattgctgactttgcttttgaatatgccaggaataatcagaggagcaaagttacggctgtgcat aaagctaatattatgcgtatgtctgatggtctgtttctgagaaaatgtagagaagcagcagaaaactgtaaagatattaa atttaacgaaatgtacctcgacaccgtgtgtctgaatatggtgcaggatccatctcagtttgatgtcctggtcatgccaa atttgtatggagacatacttagtgatctatgcgcgggcttaatcgggggtcttggtgtgactcctagtgggaatattggt gctaacggagttgcaatctttgaatcggtacacggaacagctccggatattgccggaaaagacttagccaacccaacggc acttctcttgagtgctgtcatgatgttgcgtcacatggaaatgcaagactttgccatgaaaatagaaacggcttgctttg agaccatcaaagaccagaaggtcttgaccaaagatttgggaggcaacgccaaatgttcagagttcaccgcagagatctgt cgcagagtcagagccatggaatagacgtcttctccgtgtcctcctgttttcaatcccccctaaaggatgctgttatttat tacatgtcagatccatttctcttctttttctagaaataaactcctttccatttccattgctt |
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Protein
| Protein ID | habu1_s878_g03148.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03148.t1 MATSSWVPKFLRFLEGFRIQKQVTRNFASTPQTVTLIPGDGIGPEISAAVVEIFETAKVPVQFEERIVTAIQGPGGKWMI PQDAKDSMDKNKIGLKGPLKTPIAAGHPSMNLLLRKTFDLYANIRPCVSIEGYKTPYTDVDIVTIRENTEGEYSGIEHII VDGVVQSIKLITEDASKRIADFAFEYARNNQRSKVTAVHKANIMRMSDGLFLRKCREAAENCKDIKFNEMYLDTVCLNMV QDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDLANPTALLLSAVMMLRHMEM QDFAMKIETACFETIKDQKVLTKDLGGNAKCSEFTAEICRRVRAME |
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| Protein ID | habu1_s878_g03148.t2 |
| Definition | - |
>habu1_s878_g03148.t2 MATSSWVPKFLRFLEGFRIQKQVTRNFASTPQTVTLIPGDGIGPEISAAVVEIFETAKVPVQFEERIVTAIQGPGGKWMI PQDAKDSMDKNKIGLKGPLKTPIAAGHPSMNLLLRKTFDLYANIRPCVSIEGYKTPYTDVDIVTIRENTEGEYSGIEHII VDGVVQSIKLITEDASKRIADFAFEYARNNQRSKVTAVHKANIMRMSDGLFLRKCREAAENCKDIKFNEMYLDTVCLNMV QDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDLANPTALLLSAVMMLRHMEM QDFAMKIETACFETIKDQKVLTKDLGGNAKCSEFTAEICRRVRAME |
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