Gene
| Gene Model ID | habu1_s878_g03152 |
|---|---|
| Locus | habu1_scaffold878 : 1869001 ... 1875363 : + |
| To GenomeBrowser | habu1_scaffold878:1869001..1875363 |
| Genes list of scaffold | habu1_scaffold878 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cellular retinoic acid-binding protein 1 | GO:0005215 GO:0005737 GO:0006810 GO:0016918 GO:0019841 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03152.t2 | 1 | 1 | Lipocalin_7 | 4 | 89 | 5.2e-07 | 29.4 | 8.5e-11 | 6.3e-07 | 29.1 |
| habu1_s878_g03152.t2 | 1 | 1 | Lipocalin | 5 | 137 | 5.0e-25 | 88.1 | 7.4e-29 | 5.5e-25 | 88.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 11.7 |
| Venom grand-1 | 1.5 |
| Pit, infrared sensing | 8.5 |
| Nose | 12.4 |
| Brain-1 | 0.1 |
| Eye | 18.6 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 3.7 |
| Brain-2 | 0.6 |
| Spleen | 0.4 |
| Lung | 0.6 |
| Liver | 0.0 |
| Kidney | 0.3 |
| Pancreas | 1.9 |
| Small intestine | 0.1 |
| Large intestine | 1.8 |
| Stomach | 0.2 |
| heart | 0.3 |
| ovary | 0.5 |
| cheek muscle | 1.3 |
Transcript
| Transcript ID | habu1_s878_g03152.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03152.t1 ccggacctgcctcgcctccaccagccatgcccaacttcgccggcacctggaagatgaaaagcagcgagaatttcgacgaa ctcctgaaagtcctgggagtgaatgctatgctgcggaaagtggccgtggccgccgcctcgaagccccacgtggagatccg ccaggacggggaccagttctacatcaagacctccaccaccgtccggaccaccgagatcaacttcaaagtgggggagagct ttgatgaggagacggtagacggaaggaaatgcagggtacggcaacccatcgggctggcttcctctgagagtttggccact tgggagaacgaaaacaagctttactgcaagcaaacgcttctggacggccagggccccaaaacgtactggacaagagagct ggctggagaggagctgattctgacctttggtgccgatgacgtcgtatgcacgaggatttacacgcgagagtgaaaaaagg ccaactttcctctgcaggaaaagtggaggatcaacagcagatgttgtgaaaagtcctgcagagtaaacatccttgcgtgt tgttttaac |
|
| Transcript ID | habu1_s878_g03152.t2 |
| Definition | - |
>habu1_s878_g03152.t2 ccggacctgcctcgcctccaccagccatgcccaacttcgccggcacctggaagatgaaaagcagcgagaatttcgacgaa ctcctgaaagtcctgggagtgaatgctatgctgcggaaagtggccgtggccgccgcctcgaagccccacgtggagatccg ccaggacggggaccagttctacatcaagacctccaccaccgtccggaccaccgagatcaacttcaaagtgggggagagct ttgatgaggagacggtagacggaaggaaatgcaggagtttggccacttgggagaacgaaaacaagctttactgcaagcaa acgcttctggacggccagggccccaaaacgtactggacaagagagctggctggagaggagctgattctgacctttggtgc cgatgacgtcgtatgcacgaggatttacacgcgagagtgaaaaaaggccaactttcctctgcaggaaaagtggaggatca acagcagatgttgtgaaaagtcctgcagagtaaacatccttgcgtgttgttttaac |
|
Protein
| Protein ID | habu1_s878_g03152.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03152.t1 MPNFAGTWKMKSSENFDELLKVLGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGESFDEETVDGR KCRVRQPIGLASSESLATWENENKLYCKQTLLDGQGPKTYWTRELAGEELILTFGADDVVCTRIYTRE |
|
| Protein ID | habu1_s878_g03152.t2 |
| Definition | - |
>habu1_s878_g03152.t2 MPNFAGTWKMKSSENFDELLKVLGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGESFDEETVDGR KCRSLATWENENKLYCKQTLLDGQGPKTYWTRELAGEELILTFGADDVVCTRIYTRE |
|