Gene
| Gene Model ID | habu1_s878_g03154 |
|---|---|
| Locus | habu1_scaffold878 : 1943513 ... 1953470 : - |
| To GenomeBrowser | habu1_scaffold878:1943513..1953470 |
| Genes list of scaffold | habu1_scaffold878 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| snurportin-1 isoform x1 | GO:0006397 GO:0033036 GO:0043227 GO:0044424 GO:0071702 GO:1902593 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03154.t1 | 1 | 1 | Snurportin1 | 25 | 64 | 6.9e-19 | 67.3 | 2.9e-22 | 1.4e-18 | 66.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s878_g03154.t1 | gi|602654843|ref|XP_007433218.1| | PREDICTED: snurportin-1, partial [Python bivittatus] | 0.0 |
| habu1_s878_g03154.t1 | gi|530594083|ref|XP_005290632.1| | PREDICTED: snurportin-1 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s878_g03154.t1 | gi|558176661|ref|XP_006126313.1| | PREDICTED: snurportin-1 isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s878_g03154.t1 | gi|591348844|ref|XP_007068974.1| | PREDICTED: snurportin-1 [Chelonia mydas] | 0.0 |
| habu1_s878_g03154.t1 | gi|126272262|ref|XP_001365778.1| | PREDICTED: snurportin-1 isoform X1 [Monodelphis domestica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.4 |
| Venom grand-1 | 6.0 |
| Pit, infrared sensing | 11.4 |
| Nose | 15.5 |
| Brain-1 | 7.3 |
| Eye | 14.3 |
| fetal fibroblast | 29.1 |
| venom gland-2 | 9.5 |
| Brain-2 | 8.4 |
| Spleen | 8.4 |
| Lung | 14.3 |
| Liver | 7.9 |
| Kidney | 18.6 |
| Pancreas | 15.5 |
| Small intestine | 11.1 |
| Large intestine | 10.4 |
| Stomach | 10.9 |
| heart | 17.2 |
| ovary | 39.7 |
| cheek muscle | 16.4 |
Transcript
| Transcript ID | habu1_s878_g03154.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03154.t1 gttcgaatcccgcctggtggcgagcgaggctggcttgggctgccccagaggaagaatggaggagctgagccaggctctgg cctgcaactttgttgtctcgcaggacctgaacagccccgcggctccacacccacgcctggcccagtacaagcccaagtac agctccctggagcagggcgagagacggcggcggctgctggagctccagaagactaagcggctggactatataaaccatgc cagaaggctggcggaggatgactggtcctacacagcggaggaggagaaggaagaggaggaggtagagcacaacaagggca aggagggagagagagccaaggctgatggagatcatgaagacatggagctagaccttgtaaagaagctaccgaaacgctat gccaaccagctgatgctttctgagtggctgattgatgtccccccagatctggatcaggagtggctctttgtggtgtgtcc tacggggaagagagctcttgtggtggcctccaggggcaccacagcagtgtacaccaaaagtgggttttgtgtcaatcgct tcccttctctcttgcctggtgggaaccggcttaattcggcaacagggaaagaatacaccatcctggactgcatctacagt gaggtccagcagacgtactacgtccttgacgtgatgtgttggcggggacaccctgtctatgattgccagacagatttcag attctactggctgcattccaaaatggaggaagagatggtcttgtcggagaaaagccgacttaacccatataggtttgtgg gcctcaagagctattcctgcaatgcagccagcctgtgtgaggttctggccatgacgttcccctttgaggtagacgggctc cttttctatcacaaacaggcccactacaatcccggcagtacgccgttggtgggctggctgcgcccttacatggtctccga catcttgggcattgcggtgcccagctgcccgctcacctccaagccgggctacgcggggcagcagctgcagcaaatcatcg agcacaagaggaataaaaaccagcagccgggagctgctgacgatcccgcctcgcaagacgggcgttacgaactggagcac ttgtccactcctcgagtggagccatcggcgcccgtcttggaggagagcgagtgccagatggataactgattagaggccag aaagtggccaggatcggtcgagaacatcttccataaacccagattggaaccccaccatctccaacgattggcatgtaacg ggatagtttcgttccgagggtttcggcctctttgtcctgttttagagatgctgccatctatccatgcccacaattgagtt tctgaataaattggaatacgagccgctataaa |
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Protein
| Protein ID | habu1_s878_g03154.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03154.t1 MEELSQALACNFVVSQDLNSPAAPHPRLAQYKPKYSSLEQGERRRRLLELQKTKRLDYINHARRLAEDDWSYTAEEEKEE EEVEHNKGKEGERAKADGDHEDMELDLVKKLPKRYANQLMLSEWLIDVPPDLDQEWLFVVCPTGKRALVVASRGTTAVYT KSGFCVNRFPSLLPGGNRLNSATGKEYTILDCIYSEVQQTYYVLDVMCWRGHPVYDCQTDFRFYWLHSKMEEEMVLSEKS RLNPYRFVGLKSYSCNAASLCEVLAMTFPFEVDGLLFYHKQAHYNPGSTPLVGWLRPYMVSDILGIAVPSCPLTSKPGYA GQQLQQIIEHKRNKNQQPGAADDPASQDGRYELEHLSTPRVEPSAPVLEESECQMDN |
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