Gene
| Gene Model ID | habu1_s878_g03155 |
|---|---|
| Locus | habu1_scaffold878 : 1956521 ... 1966862 : + |
| To GenomeBrowser | habu1_scaffold878:1956521..1966862 |
| Genes list of scaffold | habu1_scaffold878 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sorting nexin-33 | GO:0000281 GO:0005829 GO:0006886 GO:0007032 GO:0007067 GO:0016197 GO:0017038 GO:0019898 GO:0030659 GO:0035091 GO:0036089 GO:0042802 GO:0044351 GO:0045806 GO:0051044 GO:0097320 GO:2000009 GO:2000010 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03155.t1 | 1 | 1 | SH3_1 | 6 | 53 | 1.7e-10 | 40.0 | 1.9e-13 | 4.0e-10 | 38.9 |
| habu1_s878_g03155.t1 | 1 | 1 | SH3_2 | 6 | 58 | 2.0e-09 | 36.8 | 2.8e-12 | 6.0e-09 | 35.2 |
| habu1_s878_g03155.t1 | 1 | 1 | SH3_9 | 7 | 57 | 1.6e-12 | 46.7 | 1.8e-15 | 3.9e-12 | 45.5 |
| habu1_s878_g03155.t1 | 1 | 1 | PX | 223 | 323 | 5.8e-20 | 71.1 | 4.8e-23 | 1.0e-19 | 70.3 |
| habu1_s878_g03155.t1 | 1 | 1 | BAR_3_WASP_bdg | 326 | 561 | 0.0 | 353.2 | 0.0 | 0.0 | 352.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s878_g03155.t1 | gi|602654836|ref|XP_007433217.1| | PREDICTED: sorting nexin-33 [Python bivittatus] | 0.0 |
| habu1_s878_g03155.t1 | gi|637345862|ref|XP_008117381.1| | PREDICTED: sorting nexin-33 [Anolis carolinensis] | 0.0 |
| habu1_s878_g03155.t1 | gi|543256481|ref|XP_005419759.1| | PREDICTED: sorting nexin-33 [Geospiza fortis] | 0.0 |
| habu1_s878_g03155.t1 | gi|686601651|ref|XP_009277117.1| | PREDICTED: sorting nexin-33 [Aptenodytes forsteri] | 0.0 |
| habu1_s878_g03155.t1 | gi|683934497|ref|XP_009096478.1| | PREDICTED: sorting nexin-33 [Serinus canaria] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 13.3 |
| Venom grand-1 | 10.8 |
| Pit, infrared sensing | 8.2 |
| Nose | 14.6 |
| Brain-1 | 1.6 |
| Eye | 6.8 |
| fetal fibroblast | 2.2 |
| venom gland-2 | 10.5 |
| Brain-2 | 1.8 |
| Spleen | 3.5 |
| Lung | 11.6 |
| Liver | 8.3 |
| Kidney | 4.0 |
| Pancreas | 3.0 |
| Small intestine | 4.2 |
| Large intestine | 6.5 |
| Stomach | 5.7 |
| heart | 2.6 |
| ovary | 3.1 |
| cheek muscle | 4.7 |
Transcript
| Transcript ID | habu1_s878_g03155.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03155.t1 gccgagacccggccgcctcactggatacccccatggcagtccaagcgcgagcactttacgatttccagagcgagaacaag gaagaaatcagtatccgtgagaatgaagaattggtgctcttcaacgagaaatccctggatggctggctgcaaggcaccaa ctcccgaggagagacaggcctctttcccgcctcttacgtggagattcttcgctccaggtcctcctcaacttacaccaact gttccaacagccccaccgggtctcctggaaatgggtcctctttctatgtccccccgtccgcccccggcatctcccaccag ggcagctttgaagatgatgaggacgactgggacgattgggacgatgatggcacggtggtggaggaaccccggagcggggc agggaccaacgggcacccctcgccaagcctctcctgccccaggccctacgctcaccccaacaacgtcggcagccgggcca agccatccttggagaggcaggacagcattggctcttccaagagaggaagcatggtgagtcggaacctcaaccgtttctcc agctttgtccggtctggagtggaggccttcattttgggagatgtccccatgatgggcaagatctcagaggcctactacat cgacatgggctccaaaggtcctcagtggaggtccagcccacaccctttcctctgctccgtggaagagcccaccaaacaga ccaagttcaaaggcatcaagagctacatctcctaccgcttgacgcccagcaacggcaattcaccggtttaccggcgctac aaacactttgactggctgtacaaccgtctcttgcacaagttcaccatcatctcggtgccccacctgccggagaagcaagc cacggggcgcttcggggaggacttcatcgagaagcgcaaacgcaggctgatcttgtggatggaccacatgaccagccacc cggcgctttcccaatacgagggcttccaacacttcctcacctgcggggacaacaagcagtggaagatggggaagcgtcgg gcggagaaggatgagatggtgggggctagtttcctcctgaccctccagatcccaaccgagcaccaagacctgcaggatgt ggaggaccgagtggacaccttcaaagccttcaacaagaagatggacgacagcgtcctgcagttgaccagcgtggcttctg agctggccaggaagcacgttgggggcttccgtaaagagttccaaaaactgggcaatgctttccaagccatcagccaagcc ttccagatggacccaccttacagttttgatgccctcaacaatgccatctcccacacgggcaagacctacgagatggtggg ggagatgtttgccgagcaacccaagaacgacctgttcctcatgttggattccctctccttgtatcagggactcctctcca acttcccagatatcattcatcttcagaaaggtgcgtttgccaaagtgaaggagagccaacggatgagcgacgaagggaaa atggaccaggaggaggcagatgggatccggaagcgttgccgagtggttggctttgccctccaggcggagatgaattactt ccacgagagacgcatcttggacttcaagaaaatgatgcagtcctacatcagggagcagattgtcttctaccagagagtca gccagaagctggaagagaccctgaggagatatgacaacctctaggaagcctgccagatgtcagagctcatgatggtcctc aacgctactgtgcccccagctgggatgagcagcagtgaccgtgttttcttctctgcctctggaagagggaggtcttctcc tcctggtggatcatgggaggttctcccagttgacttgtgctctccatcatcttcatgatgctgaacttagagcatcgaga gggaagcttgtagccctgtcctgaccaaagcttgggatgaatgcttccagcccatcccgatcaaattgcaaggacccagg caagtaattgttgcacaaaagacattttgacgagtggaattcttttcctcaagaaaagtctagcttctggctgtcctagc cttgttgtttacagaggaagtaaaagaatttgctttccaaaggaaa |
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Protein
| Protein ID | habu1_s878_g03155.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03155.t1 MAVQARALYDFQSENKEEISIRENEELVLFNEKSLDGWLQGTNSRGETGLFPASYVEILRSRSSSTYTNCSNSPTGSPGN GSSFYVPPSAPGISHQGSFEDDEDDWDDWDDDGTVVEEPRSGAGTNGHPSPSLSCPRPYAHPNNVGSRAKPSLERQDSIG SSKRGSMVSRNLNRFSSFVRSGVEAFILGDVPMMGKISEAYYIDMGSKGPQWRSSPHPFLCSVEEPTKQTKFKGIKSYIS YRLTPSNGNSPVYRRYKHFDWLYNRLLHKFTIISVPHLPEKQATGRFGEDFIEKRKRRLILWMDHMTSHPALSQYEGFQH FLTCGDNKQWKMGKRRAEKDEMVGASFLLTLQIPTEHQDLQDVEDRVDTFKAFNKKMDDSVLQLTSVASELARKHVGGFR KEFQKLGNAFQAISQAFQMDPPYSFDALNNAISHTGKTYEMVGEMFAEQPKNDLFLMLDSLSLYQGLLSNFPDIIHLQKG AFAKVKESQRMSDEGKMDQEEADGIRKRCRVVGFALQAEMNYFHERRILDFKKMMQSYIREQIVFYQRVSQKLEETLRRY DNL |
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