Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s878_g03157
Locus habu1_scaffold878 : 2036881 ... 2045031 : +
To GenomeBrowser habu1_scaffold878:2036881..2045031
Genes list of scaffold habu1_scaffold878

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s878_g03157.t1 gi|602654847|ref|XP_007433220.1| PREDICTED: outer dense fiber protein 3-like protein 1 [Python bivittatus] 0.0
habu1_s878_g03157.t1 gi|637345924|ref|XP_008117394.1| PREDICTED: outer dense fiber protein 3-like protein 1 [Anolis carolinensis] 0.0
habu1_s878_g03157.t1 gi|591348852|ref|XP_007068978.1| PREDICTED: outer dense fiber protein 3-like protein 1 [Chelonia mydas] 0.0
habu1_s878_g03157.t1 gi|558176785|ref|XP_006126340.1| PREDICTED: outer dense fiber protein 3-like protein 1 [Pelodiscus sinensis] 9.99967e-42
habu1_s878_g03157.t1 gi|507962387|ref|XP_004687644.1| PREDICTED: outer dense fiber protein 3-like protein 1 [Condylura cristata] 2.0e-35

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.0
Spleen 0.0
Lung 0.1
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.1
cheek muscle 0.0

Transcript
Transcript IDhabu1_s878_g03157.t1
Definition-
>habu1_s878_g03157.t1
gccgcagcagagtaccccaaggaggcaaagagcggttattttaattggttgtcataagaacaaacccagcttcattcccc
attaatgacaagagccatctggcttcttccatagagcgtagcgttattattccaatggcaacatctgcattgaaaaaaac
caatcagaaagttacctacttcatcaagcctggttcctctccaaatccagctagagcgccagttggaccaaaaaagtacg
gcttaatcagtgccaaatataaaggtccaggacctgggaagtataaccgacggccttgtactggtattaagaatcacgac
ttcactaagtatactgagccagcttttaccatgcgtgtgaagtccagcccaaaaacgatcatggtgctggagagccctgg
accttgttactatgtggatcccagcatttcccgcttagggatatggaggccggtatcattcttcatgcaacagcgaggaa
agagcacaactatagtgacaactcccgctccgaacgagtatcacgtggagaagttgcaccccattgatgaaccgaatgct
ccagtgtataccataggtgctcgaacgccctattggctgaataacccaactccagctcccaacaaatatgcactgcctgg
gaccctgggtaccaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaga
agaagaagaagaagatcatgaaggatcaatggattgcacactcttactctgtataatactgtagtgaactttgtgcaaaa
aacactttggggggaaaatgattgaaactgttcctaaatgaagtaatactataattacaagagaaaccccccactaaata
tacagaccagatgttgttggattctgttccctttgcaggtttatgctcaatagttacgcaactgcatgaggatgtcagcc
atgttccaaagccgcaaattgttagagggtccataattttccttggatgtggatctggtggcttttgaccagccaataaa
ggaggatgaagaacaagaagaa

Protein
Protein IDhabu1_s878_g03157.t1
Definition-
>habu1_s878_g03157.t1
MATSALKKTNQKVTYFIKPGSSPNPARAPVGPKKYGLISAKYKGPGPGKYNRRPCTGIKNHDFTKYTEPAFTMRVKSSPK
TIMVLESPGPCYYVDPSISRLGIWRPVSFFMQQRGKSTTIVTTPAPNEYHVEKLHPIDEPNAPVYTIGARTPYWLNNPTP
APNKYALPGTLGTKKKKKKKKKKKKKKKKKKKKKKKKKKKIMKDQWIAHSYSV

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