Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s878_g03158
Locus habu1_scaffold878 : 2070470 ... 2223225 : -
To GenomeBrowser habu1_scaffold878:2070470..2223225
Genes list of scaffold habu1_scaffold878

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.2
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.0
Eye 0.1
fetal fibroblast 0.0
venom gland-2 3.0
Brain-2 0.1
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.2
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s878_g03158.t1
Definition-
>habu1_s878_g03158.t1
cggacagacagacagacagacagacaaagagacaaaaacagatagataatggatggatagacagatgaatgtagctagag
aaatacctgctgctggagggaagctcaagaagagctttgttatctcatgggcctggggctcctgagctaaaggtcaggat
cagaactgagaatgcacagcagacgagaaaatgaacatggtgattgcattaaacagatcatccaggagcagctcccagcg
ctcttttctcaaactgagctggagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaataatcatcatctcaggttgctttccatggattctcatgcaatctggatcaag
gaacggttgctggaattggcgccattacgaggtggtgaaattcatgagttcacaggtgcaattccaaaggtaaagctgcg
ccgaagcaaacatgcatttgatttcattttgcacattggagaagagaaggttcctggaaagtcgttgggcttctctgtgt
tcaacagcacagatttttccaacgggaaagtagcagacctgctaaaggatgcaaccatttctggaatcctgtttgcagag
tttcattccagagttcgaccttctgggccaccttatatagatggttctccaattcacgccggccagcgtcagaaacaagg
gcgctagatatttcagaaatgtgtcaccttggagagacctgtagcagatccgatccatcgccgcctcttctgttctgctg
ccacaggaggtccttgacatacgaccacaatggagcccaacatttctgctgcgaagcgaggcatgggttacacgagattg
gccccattttgcaactttccttgccaccattgctaagcgaatcgctgcagttgttaattgagccatacaggtgttaagtg
aatccggcttcccccattggctttgcttggcagaaggtcgcaaaaggggatcacgtgaccccgggatgctacgtccgtca
taaatatgagtcagtggccaagcgtccaaattctgatcccgtgactatggggatgtgacaatggtcatcaagtgtgggaa
aaggtcataactcccttttttcagtgctgttgtaactttgaacggtcactaaacaaacggttgtaagtcaaggactatct
atatttttctggtattatttatttattattcattttccacatttctgaaccacctttctccctccaagaggtaactctgg
gtggtgtgacatatatagacatatatagattctgctgcttagataccagtgtgaacatgtaaagactttcataaataaaa
tagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagataga
tagatagatagagatagatagatagatagatagatagatagatagactagatagatagatagatagatagatagatagat
agatgagagatagatatgatgaagatagatagatagatagatagatagatagatagatagatagatagatagatagatag
atagatagatagatagatagacagacacacagacacacagacacacagacacacagacacacagacagaatcagtgtagc
tgccctttcatgacatcaaagcaaactgcaaataagtcacctctcctggaattaaaaaaaacccagcttgctggtttgct
gattgatcggttgatcgattaattagattgctacccaccgcaatcaaaagactctcagtggtacacaacatagtcatcaa
atacagaatatcatccacaatataattttttttaaaaaaagataaa
Transcript IDhabu1_s878_g03158.t2
Definition-
>habu1_s878_g03158.t2
gtaggtcattccagagggcaggagctgccacagagaaggctctccccctgggggtcgccagccggcattgtctggccgac
ggcactctaaggaggccctctctgtgggagcagactggtcgaagggaggtgtttggtaggaggcggtcttgcaaatacct
agatgaatctctaacctctttttattattattattttcatatataatccagaaggtgtaaaacagatatgggtagtcctt
gatttatgacaattgggaattgtggtcatagcaaggagctcccagcgctcttttctcaaactgagctggagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaataatc
atcatctcaggttgctttccatggattctcatgcaatctggatcaaggaacggttgctggaattggcgccattacgaggt
ggtgaaattcatgagttcacaggtgcaattccaaaggtaaagctgcgccgaagcaaacatgcatttgatttcattttgca
cattggagaagagaaggttcctggaaagtcgttgggcttctctgtgttcaacagcacagatttttccaacgggaaagtag
cagacctgctaaaggatgcaaccatttctggaatcctgtttgcagagtttcattccagagttcgaccttctgggccacct
tatatagatggttctccaattcacgccggccagcgtcagaaacaagggcgctagatatttcagaaatgtgtcaccttgga
gagacctgtagcagatccgatccatcgccgcctcttctgttctgctgccacaggaggtccttgacatacgaccacaatgg
agcccaacatttctgctgcgaagcgaggcatgggttacacgagattggccccattttgcaactttccttgccaccattgc
taagcgaatcgctgcagttgttaattgagccatacaggtgttaagtgaatccggcttcccccattggctttgcttggcag
aaggtcgcaaaaggggatcacgtgaccccgggatgctacgtccgtcataaatatgagtcagtggccaagcgtccaaattc
tgatcccgtgactatggggatgtgacaatggtcatcaagtgtgggaaaaggtcataactcccttttttcagtgctgttgt
aactttgaacggtcactaaacaaacggttgtaagtcaaggactatctatatttttctggtattatttatttattattcat
tttccacatttctgaaccacctttctccctccaagaggtaactctgggtggtgtgacatatatagacatatatagattct
gctgcttagataccagtgtgaacatgtaaagactttcataaataaaatagatagatagatagatagatagatagatagat
agatagatagatagatagatagatagatagatagatagatagatagatagatagatagagatagatagatagatagatag
atagatagatagactagatagatagatagatagatagatagatagatagatgagagatagatatgatgaagatagataga
tagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagacagacacacaga
cacacagacacacagacacacagacacacagacagaatcagtgtagctgccctttcatgacatcaaagcaaactgcaaat
aagtcacctctcctggaattaaaaaaaacccagcttgctggtttgctgattgatcggttgatcgattaattagattgcta
cccaccgcaatcaaaagactctcagtggtacacaacatagtcatcaaatacagaatatcatccacaatataatttttttt
aaaaaaagataaa
Transcript IDhabu1_s878_g03158.t3
Definition-
>habu1_s878_g03158.t3
ggccgccatggcgctgctgggcgatctgtggcaggccctggaagcaagaaatcaggataccaattgaagcttctataatc
aacggttgcattcatataagagaccaagctagaatattttgaaataggcttctttgctgactgagccctagactcaagcc
taagacaagttaaggtcaagaaaccttgtgggaacccaccaggagagcagatggtcatccccgtgctgaggatgtctctg
aagcccaaagagggaacatgccatggcctgctctttgctaagccacaatgggagaaagaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaacaacta
aatttattgccccttccaaatccactggactctgggtagcgaaatggggctttggagaagagcttgactccctcttccag
aagacacagtaccagctcccagcgctcttttctcaaactgagctggagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaataatcatcatctcaggttgctttccatg
gattctcatgcaatctggatcaaggaacggttgctggaattggcgccattacgaggtggtgaaattcatgagttcacagg
tgcaattccaaaggtaaagctgcgccgaagcaaacatgcatttgatttcattttgcacattggagaagagaaggttcctg
gaaagtcgttgggcttctctgtgttcaacagcacagatttttccaacgggaaagtagcagacctgctaaaggatgcaacc
atttctggaatcctgtttgcaggagatctcatcgtccccaatttccttgaatgtgagaagttgccttagtagtcactttc
actctgaggtgtttgcataaatttgtagctttccaaatgttgc
Transcript IDhabu1_s878_g03158.t4
Definition-
>habu1_s878_g03158.t4
gtaggtcattccagagggcaggagctgccacagagaaggctctccccctgggggtcgccagccggcattgtctggccgac
ggcactctaaggaggccctctctgtgggagcagactggtcgaagggaggtgtttggtaggaggcggtcttgcaaatacct
agatgaatctctaacctctttttattattattattttcatatataatccagaaggtgtaaaacagatatgggtagtcctt
gatttatgacaattgggaattgtggtcatagcaaggagctcccagcgctcttttctcaaactgagctggagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaataatc
atcatctcaggttgctttccatggattctcatgcaatctggatcaaggaacggttgctggaattggcgccattacgaggt
ggtgaaattcatgagttcacaggtgcaattccaaaggtaaagctgcgccgaagcaaacatgcatttgatttcattttgca
cattggagaagagaaggttcctggaaagtcgttgggcttctctgtgttcaacagcacagatttttccaacgggaaagtag
cagacctgctaaaggatgcaaccatttctggaatcctgtttgcaggagatctcatcgtccccaatttccttgaatgtgag
aagttgccttagtagtcactttcactctgaggtgtttgcataaatttgtagctttccaaatgttgc
Transcript IDhabu1_s878_g03158.t5
Definition-
>habu1_s878_g03158.t5
cggacagacagacagacagacagacaaagagacaaaaacagatagataatggatggatagacagatgaatgtagctagag
aaatacctgctgctggagggaagctcaagaagagctttgttatctcatgggcctggggctcctgagctaaaggtcaggat
cagaactgagaatgcacagcagacgagaaaatgaacatggtgattgcattaaacagatcatccaggagcagctcccagcg
ctcttttctcaaactgagctggagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaataatcatcatctcaggttgctttccatggattctcatgcaatctggatcaag
gaacggttgctggaattggcgccattacgaggtggtgaaattcatgagttcacaggtgcaattccaaaggtaaagctgcg
ccgaagcaaacatgcatttgatttcattttgcacattggagaagagaaggttcctggaaagtcgttgggcttctctgtgt
tcaacagcacagatttttccaacgggaaagtagcagacctgctaaaggatgcaaccatttctggaatcctgtttgcagga
gatctcatcgtccccaatttccttgaatgtgagaagttgccttagtagtcactttcactctgaggtgtttgcataaattt
gtagctttccaaatgttgc

Protein
Protein IDhabu1_s878_g03158.t1
Definition-
>habu1_s878_g03158.t1
MHSRRENEHGDCIKQIIQEQLPALFSQTELEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
KKKKKNNHHLRLLSMDSHAIWIKERLLELAPLRGGEIHEFTGAIPKVKLRRSKHAFDFILHIGEEKVPGKSLGFSVFNST
DFSNGKVADLLKDATISGILFAEFHSRVRPSGPPYIDGSPIHAGQRQKQGR
Protein IDhabu1_s878_g03158.t2
Definition-
>habu1_s878_g03158.t2
MTIGNCGHSKELPALFSQTELEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNNHH
LRLLSMDSHAIWIKERLLELAPLRGGEIHEFTGAIPKVKLRRSKHAFDFILHIGEEKVPGKSLGFSVFNSTDFSNGKVAD
LLKDATISGILFAEFHSRVRPSGPPYIDGSPIHAGQRQKQGR
Protein IDhabu1_s878_g03158.t3
Definition-
>habu1_s878_g03158.t3
MVIPVLRMSLKPKEGTCHGLLFAKPQWEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEETTKFIAPSKSTGLWVAKWG
FGEELDSLFQKTQYQLPALFSQTELEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
NNHHLRLLSMDSHAIWIKERLLELAPLRGGEIHEFTGAIPKVKLRRSKHAFDFILHIGEEKVPGKSLGFSVFNSTDFSNG
KVADLLKDATISGILFAGDLIVPNFLECEKLP
Protein IDhabu1_s878_g03158.t4
Definition-
>habu1_s878_g03158.t4
MTIGNCGHSKELPALFSQTELEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNNHH
LRLLSMDSHAIWIKERLLELAPLRGGEIHEFTGAIPKVKLRRSKHAFDFILHIGEEKVPGKSLGFSVFNSTDFSNGKVAD
LLKDATISGILFAGDLIVPNFLECEKLP
Protein IDhabu1_s878_g03158.t5
Definition-
>habu1_s878_g03158.t5
MHSRRENEHGDCIKQIIQEQLPALFSQTELEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
KKKKKNNHHLRLLSMDSHAIWIKERLLELAPLRGGEIHEFTGAIPKVKLRRSKHAFDFILHIGEEKVPGKSLGFSVFNST
DFSNGKVADLLKDATISGILFAGDLIVPNFLECEKLP

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Okinawa Institute of Science and Technology
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