Gene
| Gene Model ID | habu1_s878_g03159 |
|---|---|
| Locus | habu1_scaffold878 : 2150066 ... 2392134 : + |
| To GenomeBrowser | habu1_scaffold878:2150066..2392134 |
| Genes list of scaffold | habu1_scaffold878 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform x1 | GO:0005154 GO:0021954 GO:0031175 GO:0043491 GO:0048715 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03159.t3 | 6 | 1 | LRR_8 | 114 | 171 | 0.0 | 164.0 | 1.8e-14 | 2.2e-11 | 43.3 |
| habu1_s878_g03159.t3 | 4 | 1 | LRR_4 | 116 | 152 | 8.5e-21 | 73.1 | 1.7e-06 | 0.002 | 17.6 |
| habu1_s878_g03159.t3 | 3 | 1 | LRR_5 | 123 | 215 | 1.0e-26 | 93.1 | 4.9e-11 | 6.1e-08 | 32.4 |
| habu1_s878_g03159.t3 | 6 | 2 | LRR_8 | 160 | 219 | 0.0 | 164.0 | 1.4e-15 | 1.7e-12 | 46.8 |
| habu1_s878_g03159.t3 | 4 | 2 | LRR_4 | 160 | 195 | 8.5e-21 | 73.1 | 1.6e-07 | 0.00019 | 20.9 |
| habu1_s878_g03159.t3 | 3 | 2 | LRR_5 | 200 | 319 | 1.0e-26 | 93.1 | 2.1e-14 | 2.6e-11 | 43.3 |
| habu1_s878_g03159.t3 | 6 | 3 | LRR_8 | 208 | 264 | 0.0 | 164.0 | 1.3e-14 | 1.6e-11 | 43.7 |
| habu1_s878_g03159.t3 | 4 | 3 | LRR_4 | 208 | 247 | 8.5e-21 | 73.1 | 5.4e-07 | 0.00067 | 19.2 |
| habu1_s878_g03159.t3 | 6 | 4 | LRR_8 | 257 | 303 | 0.0 | 164.0 | 7.1e-06 | 0.0087 | 15.7 |
| habu1_s878_g03159.t3 | 3 | 3 | LRR_5 | 295 | 409 | 1.0e-26 | 93.1 | 1.6e-10 | 2.0e-07 | 30.7 |
| habu1_s878_g03159.t3 | 6 | 5 | LRR_8 | 296 | 339 | 0.0 | 164.0 | 2.1e-09 | 2.5e-06 | 27.1 |
| habu1_s878_g03159.t3 | 4 | 4 | LRR_4 | 304 | 343 | 8.5e-21 | 73.1 | 1.1e-09 | 1.3e-06 | 27.8 |
| habu1_s878_g03159.t3 | 6 | 6 | LRR_8 | 352 | 411 | 0.0 | 164.0 | 3.0e-12 | 3.7e-09 | 36.2 |
| habu1_s878_g03159.t3 | 1 | 1 | I-set | 469 | 554 | 2.7e-14 | 52.7 | 5.1e-17 | 6.3e-14 | 51.6 |
| habu1_s878_g03159.t3 | 1 | 1 | Ig_2 | 472 | 547 | 3.4e-07 | 30.2 | 6.4e-10 | 7.9e-07 | 29.1 |
| habu1_s878_g03159.t3 | 1 | 1 | Ig_3 | 478 | 541 | 4.3e-06 | 27.1 | 1.1e-08 | 1.3e-05 | 25.5 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.3 |
| Venom grand-1 | 1.9 |
| Pit, infrared sensing | 1.7 |
| Nose | 6.8 |
| Brain-1 | 25.8 |
| Eye | 8.7 |
| fetal fibroblast | 28.6 |
| venom gland-2 | 0.5 |
| Brain-2 | 27.2 |
| Spleen | 0.3 |
| Lung | 6.7 |
| Liver | 0.3 |
| Kidney | 0.3 |
| Pancreas | 0.0 |
| Small intestine | 1.3 |
| Large intestine | 4.9 |
| Stomach | 5.6 |
| heart | 4.7 |
| ovary | 13.5 |
| cheek muscle | 40.7 |
Transcript
| Transcript ID | habu1_s878_g03159.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03159.t1 tctcctaaacatctttatttcctctggcatcatgagggttcctgggattctactaaggaatcttgtcaacacagaagacc ttagccagactgctgttcctgtgcatgattggaccattgaagggaggatcaggactgcatctctggaaactggtcatcct acatttgcttgggtaaaagataggatggtggcggggaagtggagcatgtattgcccaatcttggcctgttggcagccaat tctcatcttgatgttgggatccatcctctcaggctctgccacgggttgcccaccccgctgtgactgttctgcccaggaac gctcagtgacttgccaccggaagcgatacatgaccgttcctgagggcatccccaccgagaccaagctcttggatttgggg aaaaaccgcatcaagactctgaaccaggatgagtttgtcaactttcctcacctggaggagttggagttaaatgagaatat tatcagtggcattgagcccggggctttcaacaacctcttcaacctcaggactctgggtctcaggagcaaccggctcaaac ttatcccccttggggtgtttacgggactcagcaaccttaccaagttggacattagtgagaacaaaattgtgattcttctg gattatatgttccaggacttgtacaacctcaagtctttggaggttggggacaatgatcttgtctatatttcccaccgggc ttttagtggcctcaacagcttagaacatctgaccttggagaaatgcaacttgacctccatccctacggaagccctttctc acttgcatggcttaattgtgctacagttgcgccacctgaatattaacgccatcagggattactcctttaagaggctgtat cgacttaaggtcctggagatttcacattggccatatctagataccatgacatccaactgcctgtatggactcaacctgac atctctatccatcacccactgcaacctgacatcaataccttacgtctccttgaggcacctggtctatctcaggtttctga acctgtcctacaaccccattgtcagcatcgaaggttccatgcttcatgacctactcaggcttcaggagatccagctggtt gggggtcaactcaccatggtggaaccgtacgcctttcggggcctgaactacttgcggatcttgaacgtttcaggcaatct gctgaacacactggaagaatcagccttccactctgtggggaatctggaaacccttatcatagataacaatcccttggcct gtgactgccgacttctctggatcttccgacgtcgctggaggctaaacttcagtaagcggcaacccacctgtgcaactcct gaatttgtccaggggaaacagttcaaggatttttctgaggcgctcttgccaaactacttcatttgccgtcggtcacggat acgggaccgcaaaccccagcagatctttgtggatgagggtcacaccgtgcagttcatctgccgtgcagatggagacccac ctccagtcatcatgtggctgtcaccaaggaagcacctcatttcaaccaaaaccaatggacggctcactgtcttccccgat ggcactctggaggtgcgctacgcccagattcaggacaatggcacctacctatgcattgccagcaacgctggaggcaatga caccatgctggcccacctgcacgtccgcagttattcccccgactggccccaccaacctaataagacctttgctttcatct ccaaccagccaaacgagagtgatgccaacagcacgcgtgccaccgtgcctttcccctttgacatcaagaccctcatcatt gccaccaccatgggcttcatctccttcctgggagtcgtgctgttctgcctggtgctgctctttctctggagcagaggcaa agaggagcacagagatgacactggagaaggtaagcaaagatcatcagcaaaacatctcagtctgggaaagcttgagaagg aaactcaaaattgctgtctcttaaacccaagggttgttggagatgaaatagacctagacctgtccagatgcaaatttcag aataagaacacaactctggaaaacttgccacaatcagaaaaaggaaaaccaggagaagctgatgcctgacctacaatcag atgatacatgagatcatacaatcctcagagctgtatgaatgtggagatacaactccttccaaaggacagttgccaagaag gaagcggagattgcaaggaggacacaccaccaggctgctgctccagtgacagtcttcacactccggtaccttgtcttgtc agttttatgctcccaggccaacctctgcttgccaactacgatgtatagacataaaaataaatggctcagaaaccccaata aagtgacagataacataatgggagctggctttgggaaagacccacgttgccagtggtgggggaccacccaaaaggtgagt gatgtgggggggaaaagggtcttgcttgaattaggaaactccaggactacgtctagagtagcaccagaaggaaataaatt ccttagaacaaaagcctgat |
|
| Transcript ID | habu1_s878_g03159.t2 |
| Definition | - |
>habu1_s878_g03159.t2 tctcctaaacatctttatttcctctggcatcatgagggttcctgggattctactaaggaatcttgtcaacacagaagacc ttagccagactgctgttcctgtgcatgattggaccattgaagggaggatcaggactgcatctctggaaactggtcatcct acatttgcttgggtaaaagataggatggtggcggggaagtggagcatgtattgcccaatcttggcctgttggcagccaat tctcatcttgatgttgggatccatcctctcaggctctgccacgggttgcccaccccgctgtgactgttctgcccaggaac gctcagtgacttgccaccggaagcgatacatgaccgttcctgagggcatccccaccgagaccaagctcttggatttgggg aaaaaccgcatcaagactctgaaccaggatgagtttgtcaactttcctcacctggaggagttggagttaaatgagaatat tatcagtggcattgagcccggggctttcaacaacctcttcaacctcaggactctgggtctcaggagcaaccggctcaaac ttatcccccttggggtgtttacgggactcagcaaccttaccaagttggacattagtgagaacaaaattgtgattcttctg gattatatgttccaggacttgtacaacctcaagtctttggaggttggggacaatgatcttgtctatatttcccaccgggc ttttagtggcctcaacagcttagaacatctgaccttggagaaatgcaacttgacctccatccctacggaagccctttctc acttgcatggcttaattgtgctacagttgcgccacctgaatattaacgccatcagggattactcctttaagaggctgtat cgacttaaggtcctggagatttcacattggccatatctagataccatgacatccaactgcctgtatggactcaacctgac atctctatccatcacccactgcaacctgacatcaataccttacgtctccttgaggcacctggtctatctcaggtttctga acctgtcctacaaccccattgtcagcatcgaaggttccatgcttcatgacctactcaggcttcaggagatccagctggtt gggggtcaactcaccatggtggaaccgtacgcctttcggggcctgaactacttgcggatcttgaacgtttcaggcaatct gctgaacacactggaagaatcagccttccactctgtggggaatctggaaacccttatcatagataacaatcccttggcct gtgactgccgacttctctggatcttccgacgtcgctggaggctaaacttcagtaagcggcaacccacctgtgcaactcct gaatttgtccaggggaaacagttcaaggatttttctgaggcgctcttgccaaactacttcatttgccgtcggtcacggat acgggaccgcaaaccccagcagatctttgtggatgagggtcacaccgtgcagttcatctgccgtgcagatggagacccac ctccagtcatcatgtggctgtcaccaaggaagcacctcatttcaaccaaaaccaatggacggctcactgtcttccccgat ggcactctggaggtgcgctacgcccagattcaggacaatggcacctacctatgcattgccagcaacgctggaggcaatga caccatgctggcccacctgcacgtccgcagttattcccccgactggccccaccaacctaataagacctttgctttcatct ccaaccagccaaacgagagtgatgccaacagcacgcgtgccaccgtgcctttcccctttgacatcaagaccctcatcatt gccaccaccatgggcttcatctccttcctgggagtcgtgctgttctgcctggtgctgctctttctctggagcagaggcaa agaggagcacagagatgacactggagaaggtaagcaaagatcatcagcaaaacatctcagtctgggaaagcttgagaagg aaactcaaaattgctgtctcttaaacccaagaacacaactctggaaaacttgccacaatcagaaaaaggaaaaccaggag aagctgatgcctgacctacaatcagatgatacatgagatcatacaatcctcagagctgtatgaatgtggagatacaactc cttccaaaggacagttgccaagaaggaagcggagattgcaaggaggacacaccaccaggctgctgctccagtgacagtct tcacactccggtaccttgtcttgtcagttttatgctcccaggccaacctctgcttgccaactacgatgtatagacataaa aataaatggctcagaaaccccaataaagtgacagataacataatgggagctggctttgggaaagacccacgttgccagtg gtgggggaccacccaaaaggtgagtgatgtgggggggaaaagggtcttgcttgaattaggaaactccaggactacgtcta gagtagcaccagaaggaaataaattccttagaacaaaagcctgat |
|
| Transcript ID | habu1_s878_g03159.t3 |
| Definition | - |
>habu1_s878_g03159.t3 gggaataaatgtgcttttcccaaaatcagcacttctcctgaacctattttttcacgagagaccttattagtctccatcag ttcaatgttttgtggaaaggaaagtctgtaattttgggccatctctaattttttttggcaacttccaagttcctgggatt ctactaaggaatcttgtcaacacagaagaccttagccagactgctgttcctgttcttgcaataatccagagaaagtccca agagcaatcaatcaagagaaggcatggcaggtgaaatgaagaagaagcattatgcgtcagtaataatttgaaaggagcag gatgggtgaggacagattcaaagggatgtttctgcaaggctatttccagaagagccagcaagatgaatgaagagatcgtg acttttacagcaggcctgacctgcagccctgaaattcgattgcatgattggaccattgaagggaggatcaggactgcatc tctggaaactggtcatcctacatttgcttgggtaaaagataggatggtggcggggaagtggagcatgtattgcccaatct tggcctgttggcagccaattctcatcttgatgttgggatccatcctctcaggctctgccacgggttgcccaccccgctgt gactgttctgcccaggaacgctcagtgacttgccaccggaagcgatacatgaccgttcctgagggcatccccaccgagac caagctcttggatttggggaaaaaccgcatcaagactctgaaccaggatgagtttgtcaactttcctcacctggaggagt tggagttaaatgagaatattatcagtggcattgagcccggggctttcaacaacctcttcaacctcaggactctgggtctc aggagcaaccggctcaaacttatcccccttggggtgtttacgggactcagcaaccttaccaagttggacattagtgagaa caaaattgtgattcttctggattatatgttccaggacttgtacaacctcaagtctttggaggttggggacaatgatcttg tctatatttcccaccgggcttttagtggcctcaacagcttagaacatctgaccttggagaaatgcaacttgacctccatc cctacggaagccctttctcacttgcatggcttaattgtgctacagttgcgccacctgaatattaacgccatcagggatta ctcctttaagaggctgtatcgacttaaggtcctggagatttcacattggccatatctagataccatgacatccaactgcc tgtatggactcaacctgacatctctatccatcacccactgcaacctgacatcaataccttacgtctccttgaggcacctg gtctatctcaggtttctgaacctgtcctacaaccccattgtcagcatcgaaggttccatgcttcatgacctactcaggct tcaggagatccagctggttgggggtcaactcaccatggtggaaccgtacgcctttcggggcctgaactacttgcggatct tgaacgtttcaggcaatctgctgaacacactggaagaatcagccttccactctgtggggaatctggaaacccttatcata gataacaatcccttggcctgtgactgccgacttctctggatcttccgacgtcgctggaggctaaacttcagtaagcggca acccacctgtgcaactcctgaatttgtccaggggaaacagttcaaggatttttctgaggcgctcttgccaaactacttca tttgccgtcggtcacggatacgggaccgcaaaccccagcagatctttgtggatgagggtcacaccgtgcagttcatctgc cgtgcagatggagacccacctccagtcatcatgtggctgtcaccaaggaagcacctcatttcaaccaaaaccaatggacg gctcactgtcttccccgatggcactctggaggtgcgctacgcccagattcaggacaatggcacctacctatgcattgcca gcaacgctggaggcaatgacaccatgctggcccacctgcacgtccgcagttattcccccgactggccccaccaacctaat aagacctttgctttcatctccaaccagccaaacgagagtgatgccaacagcacgcgtgccaccgtgcctttcccctttga catcaagaccctcatcattgccaccaccatgggcttcatctccttcctgggagtcgtgctgttctgcctggtgctgctct ttctctggagcagaggcaaagaggagcacagagatgacactggagaaggtaagcaaagatcatcagcaaaacatctcagt ctgggaaagcttgagaaggaaactcaaaattgctgtctcttaaacccaagggttgttggagatgaaatagacctagacct gtccagatgcaaatttcagaataagaacacaactctggaaaacttgccacaatcagaaaaaggaaaaccaggagaagctg atgcctgacctacaatcagatgatacatgagatcatacaatcctcagagctgtatgaatgtggagatacaactccttcca aaggacagttgccaagaaggaagcggagattgcaaggaggacacaccaccaggctgctgctccagtgacagtcttcacac tccggtaccttgtcttgtcagttttatgctcccaggccaacctctgcttgccaactacgatgtatagacataaaaataaa tggctcagaaaccccaataaagtgacagataacataatgggagctggctttgggaaagacccacgttgccagtggtgggg gaccacccaaaaggtgagtgatgtgggggggaaaagggtcttgcttgaattaggaaactccaggactacgtctagagtag caccagaaggaaataaattccttagaacaaaagcctgat |
|
Protein
| Protein ID | habu1_s878_g03159.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03159.t1 MRVPGILLRNLVNTEDLSQTAVPVHDWTIEGRIRTASLETGHPTFAWVKDRMVAGKWSMYCPILACWQPILILMLGSILS GSATGCPPRCDCSAQERSVTCHRKRYMTVPEGIPTETKLLDLGKNRIKTLNQDEFVNFPHLEELELNENIISGIEPGAFN NLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEHL TLEKCNLTSIPTEALSHLHGLIVLQLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLT SIPYVSLRHLVYLRFLNLSYNPIVSIEGSMLHDLLRLQEIQLVGGQLTMVEPYAFRGLNYLRILNVSGNLLNTLEESAFH SVGNLETLIIDNNPLACDCRLLWIFRRRWRLNFSKRQPTCATPEFVQGKQFKDFSEALLPNYFICRRSRIRDRKPQQIFV DEGHTVQFICRADGDPPPVIMWLSPRKHLISTKTNGRLTVFPDGTLEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRS YSPDWPHQPNKTFAFISNQPNESDANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKEEHRDDTGEG KQRSSAKHLSLGKLEKETQNCCLLNPRVVGDEIDLDLSRCKFQNKNTTLENLPQSEKGKPGEADA |
|
| Protein ID | habu1_s878_g03159.t2 |
| Definition | - |
>habu1_s878_g03159.t2 MRVPGILLRNLVNTEDLSQTAVPVHDWTIEGRIRTASLETGHPTFAWVKDRMVAGKWSMYCPILACWQPILILMLGSILS GSATGCPPRCDCSAQERSVTCHRKRYMTVPEGIPTETKLLDLGKNRIKTLNQDEFVNFPHLEELELNENIISGIEPGAFN NLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEHL TLEKCNLTSIPTEALSHLHGLIVLQLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLT SIPYVSLRHLVYLRFLNLSYNPIVSIEGSMLHDLLRLQEIQLVGGQLTMVEPYAFRGLNYLRILNVSGNLLNTLEESAFH SVGNLETLIIDNNPLACDCRLLWIFRRRWRLNFSKRQPTCATPEFVQGKQFKDFSEALLPNYFICRRSRIRDRKPQQIFV DEGHTVQFICRADGDPPPVIMWLSPRKHLISTKTNGRLTVFPDGTLEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRS YSPDWPHQPNKTFAFISNQPNESDANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKEEHRDDTGEG KQRSSAKHLSLGKLEKETQNCCLLNPRTQLWKTCHNQKKENQEKLMPDLQSDDT |
|
| Protein ID | habu1_s878_g03159.t3 |
| Definition | - |
>habu1_s878_g03159.t3 MNEEIVTFTAGLTCSPEIRLHDWTIEGRIRTASLETGHPTFAWVKDRMVAGKWSMYCPILACWQPILILMLGSILSGSAT GCPPRCDCSAQERSVTCHRKRYMTVPEGIPTETKLLDLGKNRIKTLNQDEFVNFPHLEELELNENIISGIEPGAFNNLFN LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEHLTLEK CNLTSIPTEALSHLHGLIVLQLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPY VSLRHLVYLRFLNLSYNPIVSIEGSMLHDLLRLQEIQLVGGQLTMVEPYAFRGLNYLRILNVSGNLLNTLEESAFHSVGN LETLIIDNNPLACDCRLLWIFRRRWRLNFSKRQPTCATPEFVQGKQFKDFSEALLPNYFICRRSRIRDRKPQQIFVDEGH TVQFICRADGDPPPVIMWLSPRKHLISTKTNGRLTVFPDGTLEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPD WPHQPNKTFAFISNQPNESDANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKEEHRDDTGEGKQRS SAKHLSLGKLEKETQNCCLLNPRVVGDEIDLDLSRCKFQNKNTTLENLPQSEKGKPGEADA |
|